More than 300 homologs were found in PanDaTox collection
for query gene Sden_0861 on replicon NC_007954
Organism: Shewanella denitrificans OS217



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007954  Sden_0861  chemotaxis sensory transducer  100 
 
 
481 aa  969    Shewanella denitrificans OS217  Bacteria  normal  n/a   
 
 
-
 
NC_008345  Sfri_1416  methyl-accepting chemotaxis sensory transducer  68.4 
 
 
481 aa  659    Shewanella frigidimarina NCIMB 400  Bacteria  normal  0.493152  n/a   
 
 
-
 
NC_008321  Shewmr4_1442  methyl-accepting chemotaxis sensory transducer  66.18 
 
 
484 aa  618  1e-176  Shewanella sp. MR-4  Bacteria  normal  normal 
 
 
-
 
NC_008322  Shewmr7_1507  methyl-accepting chemotaxis sensory transducer  66.18 
 
 
484 aa  618  1e-176  Shewanella sp. MR-7  Bacteria  normal  normal 
 
 
-
 
NC_009052  Sbal_2727  methyl-accepting chemotaxis sensory transducer  65.77 
 
 
484 aa  612  9.999999999999999e-175  Shewanella baltica OS155  Bacteria  hitchhiker  0.00000872044  n/a   
 
 
-
 
NC_009997  Sbal195_2820  methyl-accepting chemotaxis sensory transducer  65.77 
 
 
484 aa  612  9.999999999999999e-175  Shewanella baltica OS195  Bacteria  normal  0.0806929  normal  0.41842 
 
 
-
 
NC_008577  Shewana3_1499  methyl-accepting chemotaxis sensory transducer  65.77 
 
 
484 aa  612  9.999999999999999e-175  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_009665  Shew185_2744  methyl-accepting chemotaxis sensory transducer  65.77 
 
 
484 aa  611  1e-173  Shewanella baltica OS185  Bacteria  normal  0.234847  n/a   
 
 
-
 
NC_011663  Sbal223_1632  methyl-accepting chemotaxis sensory transducer  65.56 
 
 
484 aa  610  1e-173  Shewanella baltica OS223  Bacteria  normal  0.19262  hitchhiker  0.00019204 
 
 
-
 
NC_009831  Ssed_1664  methyl-accepting chemotaxis sensory transducer  61.95 
 
 
482 aa  578  1e-164  Shewanella sediminis HAW-EB3  Bacteria  normal  0.587548  normal 
 
 
-
 
NC_009092  Shew_2263  methyl-accepting chemotaxis sensory transducer  63.62 
 
 
482 aa  572  1.0000000000000001e-162  Shewanella loihica PV-4  Bacteria  hitchhiker  0.00569391  normal  0.100749 
 
 
-
 
NC_009438  Sputcn32_2422  methyl-accepting chemotaxis sensory transducer  64.73 
 
 
484 aa  561  1.0000000000000001e-159  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_008700  Sama_2140  putative methyl-accepting chemotaxis sensory transducer  60.83 
 
 
479 aa  551  1e-156  Shewanella amazonensis SB2B  Bacteria  normal  normal 
 
 
-
 
NC_009901  Spea_1637  methyl-accepting chemotaxis sensory transducer  59.25 
 
 
482 aa  538  9.999999999999999e-153  Shewanella pealeana ATCC 700345  Bacteria  normal  0.301948  n/a   
 
 
-
 
NC_010506  Swoo_2947  methyl-accepting chemotaxis sensory transducer  60.08 
 
 
482 aa  535  1e-151  Shewanella woodyi ATCC 51908  Bacteria  normal  normal 
 
 
-
 
NC_008700  Sama_0643  putative methyl-accepting chemotaxis sensory transducer  43.27 
 
 
478 aa  333  3e-90  Shewanella amazonensis SB2B  Bacteria  hitchhiker  0.000131612  normal 
 
 
-
 
NC_009456  VC0395_0713  methyl-accepting chemotaxis protein  39.75 
 
 
473 aa  326  7e-88  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_009784  VIBHAR_05936  hypothetical protein  40.2 
 
 
480 aa  325  1e-87  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_009092  Shew_2902  methyl-accepting chemotaxis sensory transducer  40.86 
 
 
479 aa  315  9.999999999999999e-85  Shewanella loihica PV-4  Bacteria  normal  0.56843  normal  0.473301 
 
 
-
 
NC_013457  VEA_000202  methyl-accepting chemotaxis protein  40.86 
 
 
476 aa  315  9.999999999999999e-85  Vibrio sp. Ex25  Bacteria  normal  0.856149  n/a   
 
 
-
 
NC_007954  Sden_3066  chemotaxis sensory transducer  40.75 
 
 
488 aa  313  3.9999999999999997e-84  Shewanella denitrificans OS217  Bacteria  normal  0.301784  n/a   
 
 
-
 
NC_008345  Sfri_3719  methyl-accepting chemotaxis sensory transducer  38.56 
 
 
479 aa  312  9e-84  Shewanella frigidimarina NCIMB 400  Bacteria  normal  0.0481837  n/a   
 
 
-
 
NC_007954  Sden_1601  chemotaxis sensory transducer  41.35 
 
 
500 aa  297  3e-79  Shewanella denitrificans OS217  Bacteria  normal  0.78336  n/a   
 
 
-
 
NC_008700  Sama_1954  putative methyl-accepting chemotaxis sensory transducer  39.53 
 
 
504 aa  289  6e-77  Shewanella amazonensis SB2B  Bacteria  normal  0.0290306  normal 
 
 
-
 
NC_009092  Shew_2217  methyl-accepting chemotaxis sensory transducer  38.86 
 
 
500 aa  286  5e-76  Shewanella loihica PV-4  Bacteria  normal  0.802205  normal  0.183546 
 
 
-
 
NC_009438  Sputcn32_1827  methyl-accepting chemotaxis sensory transducer  38.77 
 
 
502 aa  282  1e-74  Shewanella putrefaciens CN-32  Bacteria  hitchhiker  0.00626539  n/a   
 
 
-
 
NC_008321  Shewmr4_1807  methyl-accepting chemotaxis sensory transducer  37.8 
 
 
505 aa  278  1e-73  Shewanella sp. MR-4  Bacteria  normal  normal 
 
 
-
 
NC_008322  Shewmr7_2170  methyl-accepting chemotaxis sensory transducer  37.8 
 
 
505 aa  278  1e-73  Shewanella sp. MR-7  Bacteria  normal  normal 
 
 
-
 
NC_009665  Shew185_1899  methyl-accepting chemotaxis sensory transducer  38.42 
 
 
506 aa  276  7e-73  Shewanella baltica OS185  Bacteria  hitchhiker  0.000132488  n/a   
 
 
-
 
NC_009052  Sbal_1872  methyl-accepting chemotaxis sensory transducer  38.42 
 
 
506 aa  276  8e-73  Shewanella baltica OS155  Bacteria  normal  0.0204582  n/a   
 
 
-
 
NC_008577  Shewana3_1862  methyl-accepting chemotaxis sensory transducer  37.43 
 
 
505 aa  276  8e-73  Shewanella sp. ANA-3  Bacteria  normal  0.149959  normal 
 
 
-
 
NC_009997  Sbal195_1906  methyl-accepting chemotaxis sensory transducer  38.42 
 
 
506 aa  275  1.0000000000000001e-72  Shewanella baltica OS195  Bacteria  hitchhiker  0.00117287  normal 
 
 
-
 
NC_011663  Sbal223_2420  methyl-accepting chemotaxis sensory transducer  38.42 
 
 
506 aa  275  1.0000000000000001e-72  Shewanella baltica OS223  Bacteria  normal  0.0671416  hitchhiker  0.00255163 
 
 
-
 
NC_009901  Spea_2471  methyl-accepting chemotaxis sensory transducer  36.53 
 
 
499 aa  274  2.0000000000000002e-72  Shewanella pealeana ATCC 700345  Bacteria  normal  n/a   
 
 
-
 
NC_009831  Ssed_2599  methyl-accepting chemotaxis sensory transducer  36.76 
 
 
501 aa  274  2.0000000000000002e-72  Shewanella sediminis HAW-EB3  Bacteria  decreased coverage  0.000558383  normal 
 
 
-
 
NC_004347  SO_2083  methyl-accepting chemotaxis protein  38.02 
 
 
505 aa  274  3e-72  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_009783  VIBHAR_02368  hypothetical protein  43.3 
 
 
472 aa  254  2.0000000000000002e-66  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_009831  Ssed_4500  methyl-accepting chemotaxis protein  35.39 
 
 
467 aa  252  1e-65  Shewanella sediminis HAW-EB3  Bacteria  normal  hitchhiker  0.000000193555 
 
 
-
 
NC_013456  VEA_003409  methyl-accepting chemotaxis protein  36.73 
 
 
467 aa  251  2e-65  Vibrio sp. Ex25  Bacteria  decreased coverage  0.0000050033  n/a   
 
 
-
 
NC_008345  Sfri_3852  methyl-accepting chemotaxis sensory transducer  34.53 
 
 
467 aa  223  4.9999999999999996e-57  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_008740  Maqu_2346  methyl-accepting chemotaxis sensory transducer  37.06 
 
 
564 aa  191  2e-47  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_009438  Sputcn32_2347  methyl-accepting chemotaxis sensory transducer  39.41 
 
 
533 aa  186  1.0000000000000001e-45  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_009439  Pmen_2650  methyl-accepting chemotaxis sensory transducer  32.69 
 
 
568 aa  180  4.999999999999999e-44  Pseudomonas mendocina ymp  Bacteria  normal  normal 
 
 
-
 
NC_011901  Tgr7_2492  methyl-accepting chemotaxis sensory transducer  37.04 
 
 
572 aa  179  1e-43  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_009457  VC0395_A0868  methyl-accepting chemotaxis protein  37.25 
 
 
536 aa  176  9.999999999999999e-43  Vibrio cholerae O395  Bacteria  hitchhiker  0.000231989  n/a   
 
 
-
 
NC_008577  Shewana3_2521  methyl-accepting chemotaxis sensory transducer  36.23 
 
 
533 aa  176  9.999999999999999e-43  Shewanella sp. ANA-3  Bacteria  normal  hitchhiker  0.000172201 
 
 
-
 
NC_011663  Sbal223_0226  methyl-accepting chemotaxis sensory transducer  32.96 
 
 
527 aa  176  9.999999999999999e-43  Shewanella baltica OS223  Bacteria  normal  normal  0.16836 
 
 
-
 
NC_009997  Sbal195_4233  methyl-accepting chemotaxis sensory transducer  32.96 
 
 
525 aa  176  9.999999999999999e-43  Shewanella baltica OS195  Bacteria  normal  hitchhiker  0.000524679 
 
 
-
 
NC_009438  Sputcn32_0513  methyl-accepting chemotaxis sensory transducer  34.62 
 
 
542 aa  175  9.999999999999999e-43  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_011901  Tgr7_0157  methyl-accepting chemotaxis sensory transducer  32.93 
 
 
646 aa  174  1.9999999999999998e-42  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.805637  n/a   
 
 
-
 
NC_007005  Psyr_3114  histidine kinase, HAMP region: chemotaxis sensory transducer  33.33 
 
 
541 aa  174  2.9999999999999996e-42  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.860602  normal 
 
 
-
 
NC_009654  Mmwyl1_1586  methyl-accepting chemotaxis sensory transducer  35.28 
 
 
626 aa  174  2.9999999999999996e-42  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_011663  Sbal223_2530  methyl-accepting chemotaxis sensory transducer with Cache sensor  34.93 
 
 
533 aa  174  5e-42  Shewanella baltica OS223  Bacteria  normal  0.616311  hitchhiker  0.00580613 
 
 
-
 
NC_009997  Sbal195_1793  methyl-accepting chemotaxis sensory transducer  34.93 
 
 
533 aa  173  5e-42  Shewanella baltica OS195  Bacteria  normal  0.0175347  normal  0.776493 
 
 
-
 
NC_009456  VC0395_0962  methyl-accepting chemotaxis protein  33.74 
 
 
643 aa  173  7.999999999999999e-42  Vibrio cholerae O395  Bacteria  hitchhiker  0.000917898  n/a   
 
 
-
 
NC_007005  Psyr_2315  histidine kinase, HAMP region: chemotaxis sensory transducer  34.12 
 
 
653 aa  172  9e-42  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.967368  normal 
 
 
-
 
NC_009665  Shew185_4113  methyl-accepting chemotaxis sensory transducer  33.04 
 
 
527 aa  170  5e-41  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_007005  Psyr_2966  histidine kinase, HAMP region: chemotaxis sensory transducer  31.59 
 
 
642 aa  170  5e-41  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.249585  normal  0.113943 
 
 
-
 
NC_008340  Mlg_1098  methyl-accepting chemotaxis sensory transducer  31.03 
 
 
637 aa  168  2e-40  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  0.0167241  normal 
 
 
-
 
NC_008577  Shewana3_3924  methyl-accepting chemotaxis sensory transducer  31.56 
 
 
527 aa  167  5.9999999999999996e-40  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_010322  PputGB1_2268  methyl-accepting chemotaxis sensory transducer  32.86 
 
 
541 aa  166  5.9999999999999996e-40  Pseudomonas putida GB-1  Bacteria  normal  0.255239  normal 
 
 
-
 
NC_009656  PSPA7_5279  putative chemotaxis transducer  33.78 
 
 
712 aa  166  6.9999999999999995e-40  Pseudomonas aeruginosa PA7  Bacteria  normal  0.0493383  n/a   
 
 
-
 
NC_009831  Ssed_3705  methyl-accepting chemotaxis sensory transducer  34.06 
 
 
541 aa  166  9e-40  Shewanella sediminis HAW-EB3  Bacteria  normal  0.0963791  normal 
 
 
-
 
NC_011901  Tgr7_1324  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  36.86 
 
 
523 aa  166  1.0000000000000001e-39  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.587106  n/a   
 
 
-
 
NC_004578  PSPTO_3379  methyl-accepting chemotaxis protein  36.25 
 
 
559 aa  166  1.0000000000000001e-39  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_010501  PputW619_2263  methyl-accepting chemotaxis sensory transducer  32.29 
 
 
541 aa  166  1.0000000000000001e-39  Pseudomonas putida W619  Bacteria  normal  normal 
 
 
-
 
NC_009456  VC0395_0173  methyl-accepting chemotaxis protein  34.49 
 
 
639 aa  166  1.0000000000000001e-39  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_009512  Pput_2091  methyl-accepting chemotaxis sensory transducer  32.96 
 
 
541 aa  164  2.0000000000000002e-39  Pseudomonas putida F1  Bacteria  normal  0.596764  normal 
 
 
-
 
NC_008345  Sfri_0861  methyl-accepting chemotaxis sensory transducer  33.71 
 
 
542 aa  164  2.0000000000000002e-39  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_008321  Shewmr4_3728  methyl-accepting chemotaxis sensory transducer  32.16 
 
 
527 aa  164  3e-39  Shewanella sp. MR-4  Bacteria  normal  normal  0.436185 
 
 
-
 
NC_009439  Pmen_3669  methyl-accepting chemotaxis sensory transducer  34.88 
 
 
716 aa  164  3e-39  Pseudomonas mendocina ymp  Bacteria  normal  0.170337  normal 
 
 
-
 
NC_004578  PSPTO_3098  methyl-accepting chemotaxis protein  33.53 
 
 
642 aa  164  4.0000000000000004e-39  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.398555  n/a   
 
 
-
 
NC_004578  PSPTO_3279  methyl-accepting chemotaxis protein  33.33 
 
 
541 aa  163  5.0000000000000005e-39  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.149652  n/a   
 
 
-
 
NC_008740  Maqu_0633  methyl-accepting chemotaxis sensory transducer  31.11 
 
 
552 aa  163  6e-39  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_008322  Shewmr7_3799  methyl-accepting chemotaxis sensory transducer  31.87 
 
 
527 aa  163  6e-39  Shewanella sp. MR-7  Bacteria  normal  normal 
 
 
-
 
NC_008739  Maqu_3979  methyl-accepting chemotaxis sensory transducer  31.11 
 
 
552 aa  163  6e-39  Marinobacter aquaeolei VT8  Bacteria  normal  0.594367  n/a   
 
 
-
 
NC_003910  CPS_4964  methyl-accepting chemotaxis protein  36.76 
 
 
545 aa  163  7e-39  Colwellia psychrerythraea 34H  Bacteria  normal  n/a   
 
 
-
 
NC_010501  PputW619_2284  methyl-accepting chemotaxis sensory transducer  31.74 
 
 
653 aa  163  7e-39  Pseudomonas putida W619  Bacteria  normal  hitchhiker  0.00297466 
 
 
-
 
NC_007954  Sden_0712  chemotaxis sensory transducer  34.74 
 
 
541 aa  163  8.000000000000001e-39  Shewanella denitrificans OS217  Bacteria  hitchhiker  0.0000566108  n/a   
 
 
-
 
NC_009654  Mmwyl1_0341  methyl-accepting chemotaxis sensory transducer  36.66 
 
 
544 aa  162  1e-38  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_009457  VC0395_A0931  methyl-accepting chemotaxis protein  33.99 
 
 
543 aa  162  1e-38  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_004578  PSPTO_2511  methyl-accepting chemotaxis protein  32.64 
 
 
653 aa  162  1e-38  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.295069  n/a   
 
 
-
 
NC_009831  Ssed_4463  methyl-accepting chemotaxis sensory transducer  35.26 
 
 
552 aa  162  1e-38  Shewanella sediminis HAW-EB3  Bacteria  normal  normal  0.43301 
 
 
-
 
NC_008740  Maqu_2789  methyl-accepting chemotaxis sensory transducer  33.97 
 
 
545 aa  162  1e-38  Marinobacter aquaeolei VT8  Bacteria  normal  0.888266  n/a   
 
 
-
 
NC_008463  PA14_61300  putative chemotaxis transducer  32.97 
 
 
712 aa  161  2e-38  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal  0.862971 
 
 
-
 
NC_008340  Mlg_1937  methyl-accepting chemotaxis sensory transducer  32.2 
 
 
541 aa  161  2e-38  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  0.158854  normal  0.960341 
 
 
-
 
NC_004347  SO_3045.2  methyl-accepting chemotaxis protein  55.92 
 
 
152 aa  161  3e-38  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_008740  Maqu_0956  methyl-accepting chemotaxis sensory transducer  33.33 
 
 
676 aa  161  3e-38  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_009092  Shew_0237  methyl-accepting chemotaxis sensory transducer  33.33 
 
 
632 aa  160  4e-38  Shewanella loihica PV-4  Bacteria  normal  normal  0.997473 
 
 
-
 
NC_011901  Tgr7_1674  methyl-accepting chemotaxis sensory transducer  31.58 
 
 
543 aa  160  4e-38  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_004578  PSPTO_2448  methyl-accepting chemotaxis protein  34.62 
 
 
646 aa  160  6e-38  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.718596  n/a   
 
 
-
 
NC_007912  Sde_0081  putative methyl-accepting chemotaxis sensory transducer  33.24 
 
 
544 aa  160  6e-38  Saccharophagus degradans 2-40  Bacteria  normal  normal 
 
 
-
 
NC_009656  PSPA7_2234  putative chemotaxis transducer  34.69 
 
 
545 aa  159  7e-38  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_010506  Swoo_0808  methyl-accepting chemotaxis sensory transducer  33.15 
 
 
541 aa  160  7e-38  Shewanella woodyi ATCC 51908  Bacteria  normal  normal 
 
 
-
 
NC_011901  Tgr7_0580  putative methyl-accepting chemotaxis sensory transducer  36.01 
 
 
679 aa  159  7e-38  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_009457  VC0395_A2596  methyl-accepting chemotaxis protein  33.02 
 
 
564 aa  159  8e-38  Vibrio cholerae O395  Bacteria  unclonable  0.00000000000057467  n/a   
 
 
-
 
NC_009665  Shew185_3480  methyl-accepting chemotaxis sensory transducer  33.06 
 
 
630 aa  159  1e-37  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_009997  Sbal195_3603  methyl-accepting chemotaxis sensory transducer  33.06 
 
 
630 aa  159  1e-37  Shewanella baltica OS195  Bacteria  normal  0.840663  normal 
 
 
-
 
NC_009439  Pmen_2471  methyl-accepting chemotaxis sensory transducer  32.29 
 
 
425 aa  159  1e-37  Pseudomonas mendocina ymp  Bacteria  normal  0.817651  normal 
 
 
-
 
NC_011663  Sbal223_3405  methyl-accepting chemotaxis sensory transducer with Cache sensor  33.06 
 
 
630 aa  159  1e-37  Shewanella baltica OS223  Bacteria  normal  normal 
 
 
-
 
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