| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_1601 |
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| Symbol | |
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| ID | 4018076 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | - |
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| Start bp | 1863229 |
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| End bp | 1864731 |
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| Gene Length | 1503 bp |
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| Protein Length | 500 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637955611 |
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| Product | chemotaxis sensory transducer |
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| Protein accession | YP_562608 |
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| Protein GI | 91792957 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.78336 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAGAAG TCAAGTTTAG ATGGATAGAT CAATATCTTA TTCATATGAC ACTTAAGACC
AAATTTGCCA TTCTTGCCGT AGTGCCCATG TTGATGATCA TAGGGCTCAC CCTGTTACTC
AATAGCCAAC ACCAAGCACA ATCTCTCAAA CATAGCCTTG AACAACAAAG CCAGTTTGTT
GAACACATTA ACACCCTCGT GAGTCAGCAA CAGGCTGGAG TCACTGAAGA CGCGCGCCAA
AAGCTTAACC TGCAAGTTGC AGCACAAACC CAAGTGAGTC ACCTCAATCA ATTAGACACT
AAGCTTCAAT CCCTCGCACA GAAAAATGGC GGCACAGACA TAAGCCGTGA TACCGCTTTT
ATAGTAAGTT CAGTGAGTGA ACAAGGCTTA GTCACTGTGA GTCGCCTGCC CTTAAGCCAA
TTAACCAGCA CGGACAATAA TCTGCTCGCT TATGGGGCCA TGACGGCCTT GCTAATCATA
TTGGCTATGT TTAGTTATTA CATTTCAAGC TTTGTTGGCG GTGCCCTATA CACGACAGTG
ATGGCACTTA AGCGGGCAGC CGATGGCGAC CTTGTTAGTC GACTTAATTT TTTTGAAGTG
AAAGATGAGT TCAGTATTCT TGCCATCAGC ATAGATACCT TAGTGGACAG GCAGCACAAG
CTGGTTAAAC AAATTTCCCA AGCCACTGAA CAAATTAGAC AGGTGGTGCA ATCTTTTAGA
AGCACGGCGC AGCAAGGGCA GTCCATGGCC GTAAATCAAA GGCAGCATCT TGATTCTTTA
GCCACCGCCA TGGAACAAAT GACAGCCGCC GTGAAAGAAG TCGCCCGCAA CGCAGAGCAA
TCCTCCACTG AAACCCAGGA AGCCAATCAG CAAGTGGCCG CCGGCTCAAA AGACATAGAA
ACGACCGTGG GTGCCATCGA TCTCTTGTCT AAAGAGATAG GCCAAGCCTC AGATGCGGTG
AACGTGTTAA ACGAGAATGC CAGTAAAATT GATGCTGTGG TTACGACGAT TAATTCGATT
TCAGAGCAAA CTAACCTGCT GGCCTTAAAC GCTGCCATTG AAGCGGCCCG AGCGGGTGAG
CAAGGGCGAG GCTTTGCCGT CGTTGCCGAT GAAGTGCGTA CCTTGGCTGG ACGCACCCAA
GCGGCAACCG TTGAAATTAA AAGCATGATT GAAGCTCTGC AATCAGGTAC CCGAAGCCTG
ACTCAGGTGA TGTCGCGCAC GGTAGAGCAA GCCGAGGAAG GTAAAAAGCA CGTACTGAAA
ACCGGCCAAG ACTTAGCCAC CATAGCCCAC CACAGTGGCA AAGTATTCGA AATGAGTGTG
CTTATTGCCA CCTCGGCGGA CGAGCAGTCC TCGGTTGCCA ATGAAATTGC TGGCAACTTA
ATGGAAATCC GCAACCAATC TCACAATGTA GAGCAGTCAG CCAATCACAC TGTCTCTGGC
TGTGATGAAT TGCACGCCAC TGCAGAGCAA TTAGATTCAT TACTGCTGGG GCTTAAACTG
TGA
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| Protein sequence | MKEVKFRWID QYLIHMTLKT KFAILAVVPM LMIIGLTLLL NSQHQAQSLK HSLEQQSQFV
EHINTLVSQQ QAGVTEDARQ KLNLQVAAQT QVSHLNQLDT KLQSLAQKNG GTDISRDTAF
IVSSVSEQGL VTVSRLPLSQ LTSTDNNLLA YGAMTALLII LAMFSYYISS FVGGALYTTV
MALKRAADGD LVSRLNFFEV KDEFSILAIS IDTLVDRQHK LVKQISQATE QIRQVVQSFR
STAQQGQSMA VNQRQHLDSL ATAMEQMTAA VKEVARNAEQ SSTETQEANQ QVAAGSKDIE
TTVGAIDLLS KEIGQASDAV NVLNENASKI DAVVTTINSI SEQTNLLALN AAIEAARAGE
QGRGFAVVAD EVRTLAGRTQ AATVEIKSMI EALQSGTRSL TQVMSRTVEQ AEEGKKHVLK
TGQDLATIAH HSGKVFEMSV LIATSADEQS SVANEIAGNL MEIRNQSHNV EQSANHTVSG
CDELHATAEQ LDSLLLGLKL
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