Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_1507 |
Symbol | |
ID | 4258239 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | + |
Start bp | 1758609 |
End bp | 1760063 |
Gene Length | 1455 bp |
Protein Length | 484 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 638122155 |
Product | methyl-accepting chemotaxis sensory transducer |
Protein accession | YP_737562 |
Protein GI | 114047012 |
COG category | [N] Cell motility [T] Signal transduction mechanisms |
COG ID | [COG0840] Methyl-accepting chemotaxis protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACAAA TCCAGTTTCG CACCATTGAT GCCATATTGA TCAAATTCAG TCTCAACGGA AAGTTTTGGG TTGTCTGCTC TATGGTGGCG CTGATCACCG CCGCCGTTGC ACTCGTCAAT TACCAACATG CCCACCGCAA CCTCGAAGCC GCCTCTTTGG CTCGGGTGCA GGCGACGGTT GATGCCTTTG CTCAAGTCGC GAATGCACAG CAGTTGACAG GGGATACGTT GTCACAGTTT GCCCGTGACA ATGGTTTAAG TGTTGTCAGT CGCCAAACTG AGGCTCAGCG CCAAAGAGAT AATGTGACCG CCAGCGCCAG CGTGGGATCA AGCGGCGTAC TCGAGCTGTC GCAAAATGTT GCTCAATGGG AAAGCGAGGG GCGCAGCGAT GCCAACTTAA TGTTTTGGCT CGCGTTAATC GGTTTATTGC CCTTATTCCA ACTCAGCTAC TGGATTTCAA CCTCCCTCGG TGGTGGCCTG TGGGATATGT ACATGGCCAT CAAACGCTTA GCCGATGGTG ACTTAAGTTT CAGATTAAAC TTTTTCGGCA CCGATGACTT CAGTTTAATC GCCCGCGAAA TTGACCGCTG CGCCGATAAC ATGAGCGAAA TGGTGAGTGC TATCCGCAGC AATGCTCAGA CGCTCTCCCT CGCCGCCGAT GAGTTTAATC AGCAGGCCAA AAGCAGTGGC GAGTTAATTG GTGCCCAGCA TCAATTTTTA GACTCGGTTG CCGTGGCCAT GGCACAAATG ACCTCGGCGA TTGAAGAAGT GTCGGTCAAT GCCAGTAACA CCTCGCTCCA GACCAAAGAT AACGCCAGCC AAATGAGTGC CAGCCAAGGA CGTATTAGCC ACACGGTCGA CAGTATTGGG CAACTCTCAA CCAAGATTGG CGCGGCATTT TCATCGGTAG AACAGTTATC TAAGGATGCG GCGGGTATCG ATGCCGTGGT GACTACCATC AACAGTATTT CCGAGCAGAC CAATTTGCTG GCGCTGAATG CGGCCATCGA AGCTGCCCGT GCGGGTGAGC AAGGCCGCGG TTTTGCGGTG GTTGCCGATG AAGTGCGTAC CTTAGCGGGA CGGACTCAAC AAGCGACTGT TGAGATCCAA GCGATGATCG AAGGATTGCA ATCGGGCACT CGTCAGTTAT CCAATATCAC CACCGAGATT GTGGATCGCG CCGATGAAGG CCGCAGCGCC ATTATTGCCG TGGGCGACGA TGTCGAGGGG ATGGCGCAAT CGGTTAATGC CGTATTCGAT ATGAGCAGCC AGATTGCTGC ATCGGCGGAA GAGCAGAGCG TTGCCGCCCG TGATATCGCT GGCCAGCTCA ATGAGATCCG CCATCAATCC GATACCATTA AACAAACGGC GCAGCGCAGT GTCACCCTAG CGCATGATTT GCAACATGCC TCGGTTGAAC TCGAAGGGAT CCTTAAACAG TACCGCACTA GCTAA
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Protein sequence | MKQIQFRTID AILIKFSLNG KFWVVCSMVA LITAAVALVN YQHAHRNLEA ASLARVQATV DAFAQVANAQ QLTGDTLSQF ARDNGLSVVS RQTEAQRQRD NVTASASVGS SGVLELSQNV AQWESEGRSD ANLMFWLALI GLLPLFQLSY WISTSLGGGL WDMYMAIKRL ADGDLSFRLN FFGTDDFSLI AREIDRCADN MSEMVSAIRS NAQTLSLAAD EFNQQAKSSG ELIGAQHQFL DSVAVAMAQM TSAIEEVSVN ASNTSLQTKD NASQMSASQG RISHTVDSIG QLSTKIGAAF SSVEQLSKDA AGIDAVVTTI NSISEQTNLL ALNAAIEAAR AGEQGRGFAV VADEVRTLAG RTQQATVEIQ AMIEGLQSGT RQLSNITTEI VDRADEGRSA IIAVGDDVEG MAQSVNAVFD MSSQIAASAE EQSVAARDIA GQLNEIRHQS DTIKQTAQRS VTLAHDLQHA SVELEGILKQ YRTS
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