| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_3291 |
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| Symbol | |
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| ID | 1184949 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 3718924 |
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| End bp | 3720552 |
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| Gene Length | 1629 bp |
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| Protein Length | 542 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 637394641 |
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| Product | methyl-accepting chemotaxis protein |
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| Protein accession | NP_793074 |
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| Protein GI | 28870455 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.470345 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTATTTAC GACGTTTTAA AATAGCCACG CGAACGTTGG CATGCTTTGC TGTCATGGTT
TTGCTGGTCT TGGGTTTGGG TATTTTCAGC CTGGCACAGT TGTCCAGTAT TCGTGCCAAA
GGCCTTGAGA TCGAAAACGA CTCATTGCCC GGAATTGCCT TGGGCGACGC CATTGCTCTG
GCGTTTTCAA ACACGCGCTA CGACGTAATG AAAATGTTAT CCGCTCGCAG TGCCGATCAA
CTGGTTCAGG CGCGCGACGA GTTAATGCAG CGCGAATCAG TGTTCGCAAA AGCCATAGAG
GCGTACCAGC CTTTCATCGA TTCGCCGGGC GAGCGGGAGT TGATTGAGGG CGTGGACACT
ACGTTTAAAG ACTACGCGCG ACATGCCGAA CAGGTTCACG CACTGATCAC GGCAGGCCAG
GAGGACGCAG GCCGTCTGCT GGCCTGGAAT GAGATGGCAG GTATCGCAAA GTCCCTGATG
GCGCAACTGG AAGGTCTGAA ACAGCTCAAC GATGCGTCGC AATCAGAAGC CAGCACCGGC
GCCAGCCATA CCTATGCCAC TGCCAATCGG GTCACGTTGT TTACGATGGG GTCGGCGCTG
CTGGTCACCC TGATCCTGGC CTGGCGGCTT ACTGTCAGCC TGTCGGGACC GATTAGACAG
GCGTTGGCGG CATCCGAAAT GATTGCGGCG GGCGACCTTC GCATCGCGCA CATTGAAAGC
CTTGGCAGCG ATGAGGCGGC CCTGTTACTG CAGTCGATAG TGCGGATGCG TGAAAACCTC
AGAAACACGC TGAGCCATGT CGGGCAGGCG GCCGGACAAG TGTTCACGGC GACCGAAGAA
CTGAACATAT TGATGCGCGA TAACAACGCT GACCTGCGTG TTCAGAATAG CGAAATAGAG
ATGTCTGCTG CTGCGGTGAC CGAGATGAGC CAAGCGGTAC AGGAAGTCAC GCGCAATGCT
GTTTCCACTT CAGAAGAGTC AAAGGCGTCG GCTCGTGCTG CGCAAGAAGG GCAGGGGGAA
CTCGGTCTTA CAGTCGGCTC AATCAAACAA CTGACCGAGG ATGTGCAGCA GGCTACCGAT
CAGGCACAAC TGCTGGCCGT CAGAACACTG GAAATTTCAA AAGTTCTGGA GGTTATAAGG
TCTGTTTCCG AGCAGACCAA TCTGCTTGCC CTGAACGCAG CGATTGAAGC TGCCCGTGCG
GGTGATGCCG GTCGAGGCTT TGCCGTTGTT GCAGATGAGG TGCGCGCGTT GGCTCACCGT
ACCAGTGATT CGACGCGGGA AATCGAGAGC ATGATCGAGC ACGTACAGCA AGGCACCCAA
AACACCGTAG CGGCATTGTC GCTAAGCCGC GAGCAGGCGC ATCGCACCAA AGCGCAGGCA
GAATTGGCCA ACGCAGCGTT GGCCTCTATC GCCAACTCGG TGATGATCAT TGATGATCGC
AACCTGGTAA TCGCCAGCGC CTGCGAAGAG CAAACGCAAG TCGCCCGTGA GGTCGATAGC
AACCTGGTGC GCATTCGAGA CCTGGCGGCC CAGTCGGCAA CTCGCGCGGA CAAGACCGCC
CACGCCAGTC AGCTACTCGC AGAACTTGCC AACGGCCTGA ACGAAAGGTT GAGGCATTTT
CAGTTGTAG
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| Protein sequence | MYLRRFKIAT RTLACFAVMV LLVLGLGIFS LAQLSSIRAK GLEIENDSLP GIALGDAIAL
AFSNTRYDVM KMLSARSADQ LVQARDELMQ RESVFAKAIE AYQPFIDSPG ERELIEGVDT
TFKDYARHAE QVHALITAGQ EDAGRLLAWN EMAGIAKSLM AQLEGLKQLN DASQSEASTG
ASHTYATANR VTLFTMGSAL LVTLILAWRL TVSLSGPIRQ ALAASEMIAA GDLRIAHIES
LGSDEAALLL QSIVRMRENL RNTLSHVGQA AGQVFTATEE LNILMRDNNA DLRVQNSEIE
MSAAAVTEMS QAVQEVTRNA VSTSEESKAS ARAAQEGQGE LGLTVGSIKQ LTEDVQQATD
QAQLLAVRTL EISKVLEVIR SVSEQTNLLA LNAAIEAARA GDAGRGFAVV ADEVRALAHR
TSDSTREIES MIEHVQQGTQ NTVAALSLSR EQAHRTKAQA ELANAALASI ANSVMIIDDR
NLVIASACEE QTQVAREVDS NLVRIRDLAA QSATRADKTA HASQLLAELA NGLNERLRHF
QL
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