| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I1294 |
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| Symbol | |
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| ID | 6986973 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | - |
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| Start bp | 1403518 |
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| End bp | 1405509 |
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| Gene Length | 1992 bp |
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| Protein Length | 663 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 643379657 |
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| Product | methyl-accepting chemotaxis protein |
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| Protein accession | YP_002262756 |
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| Protein GI | 209694828 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.148925 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATAGTT CGGTTGTACG TCGCATGTAT GCAGGTTTTT CACTCATTGT TATCCTGTTT
ATTACGACAG TCATTATAAT GCTCAATGGA ACGAGCAACA TCCACAAACA AATGCAATCG
GTCTCAACAG AGTCCATGCC CCTTGTCAGT TTATCAAACG AAACAAGTGT TGCCTTACTT
GCCGCCGACA AATCCTTTAA AGATTTCCTA ACCACTCGTG ATCCGGTTCA GATGCAACAA
GCTCGTCAGC AATTCTCTGT TGCAGAAACA ACATTTAAAA ATACCTTTCA GCGCTTAACC
GCCGCCGCAC AGAGAAACAG TACCACCGCA CAACAAAGCG CAGAGTTAGC GTCAATCGAA
AGCCAATATT TCACCGAAGC GCTCGTCGCA ATGGACAACT ACCAAGATTT ATTAGTCGCA
GAAGACAGCA AACAAAAAGC AACCCGTAAC TTTCAACGTT TGTATACTGA GCTTAGTGTA
CGAATGAAAG AATACATTGA CGGTCAAGAA AGCATTGCCG TAAAAATGAT GGCAAAAAGC
TACTTTGTAA AACTAGAAGA TGCAGAGTTA ATCACATCAG ATGCACTAGC AAGTAATGAC
GTTGAGTTCG TTAAAAAAGC CGTCAATAAA AACAAGAAAG CCGTGACTCA TTTAAACTAC
GCTTACCGTG GGTTAAACAA TCAACTGCCA GAATTAAAAC CTATTTTTGA TGATTCAGTG
AATAAATTCA GTCTTGAAGT CGGTAAAAAA GAAGGCATTC TTAATACGCA TTTCATTTAC
TTAAACGCCA AAGAAACCTT ATACACCAAC ATCTCAAATT TAGCTCATCA AATTGATGCA
GGGCTAACGC TTCTTAACTC ATTCAATAAA TCAGCCAATC AAGGTTTACA GAATTCACTA
GAACAGGCTG ACGTCATTTA TCAACAGAGT TTTTATAAAG CGGTTGTTCT CGGTGTGGTT
GTCTCGCTAC TTGCAACAGC TATTGGTTTT CATCTTGCCT CATCAGTACG AACGCCACTC
AATAATATGC TGCGTATTTT AGAATCATTA ACCTCTGGGG ATATGACACA ACGAATTGCA
ACAAAGCATA ACTCTGAATT TAGTCGTGTA TCTCGCCATA TTAATACGTT AGCGGATAAT
TTGCAGAAAG TCTTATTACA GCTAAGTGCG GCTTCTGATG AACTTACGAC GGTTGCACAA
AATAACAGTT CTACCGCAGA AAAGGCCAAA CAGCAGCTAC TAGAACAACG CGAAAAAACC
ACCAGTGTTG CGGCCGCAAT GACAGAAATG GAACACTCTG TCGTTGAAGT TGCATCAAGC
TCAGAAAGCT CCCTGCTTAA AGTACAAGAA GTTGAAGCGG CATCAGAGCA CGGCCAACAA
GTGATGACAA ATAACATTGC AACGATAGAG CAATTATCAA GTCGCTTAGA TGAATCTGTA
CATGCCGTTG CAAACTTACA AAAAGTCAGC AGTGAAATTG GTTCGATTCT CGATGTGATC
AATAAAATTG CAGCACAAAC TAACTTACTC GCTTTAAATG CCGCCATTGA AGCCGCTCGT
GCTGGAGAGC AAGGTCGTGG ATTTGCCGTT GTTGCCGATG AAGTTCGAGT GTTAGCAAAA
CGCACTGCAG AATCAACCTC TGAAATTGAA ACGATGATTG GTAACCTTCA ATCCAGTTCA
AAAACCACCA CTCTCGTCAT TGAAAGTTGT GTCGAAGATA TGCAACAAAG CGTAACTCAA
ACTAATGAAG CCAATAATGC CATGGTGATG ATTCAAAACT TAATTGAAGA AATAAGTCAC
ATGAGTAACC ATATTTCTCA AGCAGCAAAT GAGCAGAGTG CCACAACCAC TGAAATTGCA
CGCAGTTTGG AAGACATTAG TCACATTGCA GAAGAGAATC AAACCGCAAT GAATGATATT
GCCAATGTCA GTTCAACGCT GAATGAGTTA GCCCATCAGC AAAGTGATAT TGTGCATCAA
TTTAAAGTGT AA
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| Protein sequence | MNSSVVRRMY AGFSLIVILF ITTVIIMLNG TSNIHKQMQS VSTESMPLVS LSNETSVALL
AADKSFKDFL TTRDPVQMQQ ARQQFSVAET TFKNTFQRLT AAAQRNSTTA QQSAELASIE
SQYFTEALVA MDNYQDLLVA EDSKQKATRN FQRLYTELSV RMKEYIDGQE SIAVKMMAKS
YFVKLEDAEL ITSDALASND VEFVKKAVNK NKKAVTHLNY AYRGLNNQLP ELKPIFDDSV
NKFSLEVGKK EGILNTHFIY LNAKETLYTN ISNLAHQIDA GLTLLNSFNK SANQGLQNSL
EQADVIYQQS FYKAVVLGVV VSLLATAIGF HLASSVRTPL NNMLRILESL TSGDMTQRIA
TKHNSEFSRV SRHINTLADN LQKVLLQLSA ASDELTTVAQ NNSSTAEKAK QQLLEQREKT
TSVAAAMTEM EHSVVEVASS SESSLLKVQE VEAASEHGQQ VMTNNIATIE QLSSRLDESV
HAVANLQKVS SEIGSILDVI NKIAAQTNLL ALNAAIEAAR AGEQGRGFAV VADEVRVLAK
RTAESTSEIE TMIGNLQSSS KTTTLVIESC VEDMQQSVTQ TNEANNAMVM IQNLIEEISH
MSNHISQAAN EQSATTTEIA RSLEDISHIA EENQTAMNDI ANVSSTLNEL AHQQSDIVHQ
FKV
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