| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_4624 |
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| Symbol | |
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| ID | 1186307 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 5218750 |
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| End bp | 5220369 |
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| Gene Length | 1620 bp |
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| Protein Length | 539 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 637395961 |
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| Product | methyl-accepting chemotaxis protein |
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| Protein accession | NP_794375 |
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| Protein GI | 28871756 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.140064 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGGCTCA GAAATATAAA CCTCGCTCCA CGCGCCACCT TGTTTTTTTC GGCCATCATT
TTGCTGGTCG TGGTCTTGGG CGTCATCGCC ATACTGCAGA TGGGCAAGCT TCGCGATACG
GAAAAGGATG TCGAACTGAA TTGGCTACCC AGTATTCGGC AAACCGCGAT GATGAACTCC
ACCGTCCTTC GCGTCCGGTT GGAGACCCAG CGGGCCGTTG CCGATCCTCA AACCGTTCAG
CAGACCATCG TCAAATTTCC TGCCTACCGG AAAGCCATGA AGGATGCGGT CTATAACTAT
GAGACCCTCA TTGCGAGTGA CCAGGAGCGA CAGTTGTTCT TGGCCGTGAA AAAGTCCTAC
GACGATTACG CAAGCCAACT GGATCTGCTG GAACCTTTGT TGAAGGCAGG CGACACCGCT
TCGATTGTCA AACTCGTCGC TACCGGTATA CGTCCCCTCA CGAACCAAAT GGAAACTCAG
GTCGAGGAAT TAACACAATT CAATAACAAA GGCGCTGCGC TTGCCGGTGT TCAAGCGACG
CAAGTTTATG ATTCAGGTCT TTACATCGTC ATCGGCCTGA TTATCTTCGT CGCGCTCCTG
ACTCTTTGTT TGGCAACTCT TCTAACCAAA ACGATTACGT CGCCCATCGG GAGCGCCCTT
AGCGTCGCCG AACGCATTGC CTCAAGCGAT CTGACGAAGG AGGTTGAGGT AAGCGGTACC
GACGAGGCAG GCAGGCTTTT GAGCGCGTTG GCCACGATGC AGCAGAACCT TCGAAGCACG
ATCATGCAGA TCGCTGACTC CTCATCCCAA CTGGCTGCCG CCTCGGAAGA AATGACCGCG
GTGACTGAGC AATCCAGCCT TGGCCTGGTG TCGCAGAATG ATGAAGTAAA TCAGGCTGCA
ACTGCTGTCA CCGAGATGAG CGCTGCAGTG GACGAGGTAG CACGCAATGC CGAATCAGCT
TCCGAAGAGT CCAGGAAAGG TCAGGGCTAT ACGGAGGTTG GTTTGGAGCG TGTATCGCAG
ACGCTTAAGT CCATCGAAAA GCTGTCGAGC AACGTGCGCG ACACCAGCGA GCAGATCACT
GGCTTGTCCA ATCGTGCACA GAACATTTCC AAAGTGGTTG AGGTGATCAG AGCCATTGCT
GAGCAGACCA ATCTGCTTGC GCTCAATGCC GCGATCGAGG CCGCTAGGGC GGGTGAACAA
GGCCGAGGCT TCGCAGTCGT TGCTGACGAA GTTCGAGCCC TCGCTCACCG CACGCAAGTG
TCTACGCAAG AAATTGAGCA GATGATTCAG GCCATTCAGA ACGATTCTGA CCAGGCCGTG
AAGGCGATGG CCACCAGCAG AGAACTGGCT GCAGAATCCC TAAGCGTCGC AGGCGATGCC
AGCAGTTCGC TTGACCAGAT CGCGACAGCT ATTACGGGCA TCAACGAGCG TAACATTCTC
ATCGCCACCG CTTCGGAAGA ACAGGCGCAC GTCGCCCGGG AAGTCGATCG CAATCTGGTT
AGCATTCGCG AGCTGGCCTC CCAAAGTTCT GCAGGTGCAA GCCAGACTGC AAGCGCTTGC
AACGAGATGT CGAAGCTTGC GGTTGGTCTG AATCAGCTGG TCAATCGTTT CAAGGTTTAA
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| Protein sequence | MRLRNINLAP RATLFFSAII LLVVVLGVIA ILQMGKLRDT EKDVELNWLP SIRQTAMMNS
TVLRVRLETQ RAVADPQTVQ QTIVKFPAYR KAMKDAVYNY ETLIASDQER QLFLAVKKSY
DDYASQLDLL EPLLKAGDTA SIVKLVATGI RPLTNQMETQ VEELTQFNNK GAALAGVQAT
QVYDSGLYIV IGLIIFVALL TLCLATLLTK TITSPIGSAL SVAERIASSD LTKEVEVSGT
DEAGRLLSAL ATMQQNLRST IMQIADSSSQ LAAASEEMTA VTEQSSLGLV SQNDEVNQAA
TAVTEMSAAV DEVARNAESA SEESRKGQGY TEVGLERVSQ TLKSIEKLSS NVRDTSEQIT
GLSNRAQNIS KVVEVIRAIA EQTNLLALNA AIEAARAGEQ GRGFAVVADE VRALAHRTQV
STQEIEQMIQ AIQNDSDQAV KAMATSRELA AESLSVAGDA SSSLDQIATA ITGINERNIL
IATASEEQAH VAREVDRNLV SIRELASQSS AGASQTASAC NEMSKLAVGL NQLVNRFKV
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