More than 300 homologs were found in PanDaTox collection
for query gene Bcav_0910 on replicon NC_012669
Organism: Beutenbergia cavernae DSM 12333



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_012669  Bcav_0910  extracellular solute-binding protein family 1  100 
 
 
466 aa  929    Beutenbergia cavernae DSM 12333  Bacteria  normal  0.764586  normal 
 
 
-
 
NC_013521  Sked_27350  ABC-type sugar transport system, periplasmic component  44.69 
 
 
444 aa  368  1e-100  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.404715  normal  0.481515 
 
 
-
 
NC_013530  Xcel_0063  extracellular solute-binding protein family 1  42.98 
 
 
475 aa  337  1.9999999999999998e-91  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_013947  Snas_4693  extracellular solute-binding protein family 1  39.47 
 
 
457 aa  335  1e-90  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.363745 
 
 
-
 
NC_013595  Sros_5409  ABC-type sugar transport system periplasmic component-like protein  37.66 
 
 
457 aa  263  4.999999999999999e-69  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_013526  Tter_2526  extracellular solute-binding protein family 1  35.16 
 
 
520 aa  253  7e-66  Thermobaculum terrenum ATCC BAA-798  Bacteria  hitchhiker  0.0000430481  n/a   
 
 
-
 
NC_013525  Tter_1095  extracellular solute-binding protein family 1  32.46 
 
 
530 aa  221  9.999999999999999e-57  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_013131  Caci_3703  extracellular solute-binding protein family 1  31.52 
 
 
466 aa  178  2e-43  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.0104923  normal 
 
 
-
 
NC_010001  Cphy_3317  extracellular solute-binding protein  29.59 
 
 
492 aa  175  1.9999999999999998e-42  Clostridium phytofermentans ISDg  Bacteria  unclonable  0.0000000142443  n/a   
 
 
-
 
NC_011661  Dtur_0175  extracellular solute-binding protein family 1  29.14 
 
 
458 aa  162  1e-38  Dictyoglomus turgidum DSM 6724  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_8464  extracellular solute-binding protein family 1  28.71 
 
 
481 aa  160  3e-38  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.635867  normal  0.0842744 
 
 
-
 
NC_009620  Smed_4159  extracellular solute-binding protein  28.81 
 
 
421 aa  101  4e-20  Sinorhizobium medicae WSM419  Bacteria  normal  0.119299  normal  0.873951 
 
 
-
 
NC_013159  Svir_11620  ABC-type sugar transport system, periplasmic component  27.29 
 
 
426 aa  97.8  4e-19  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal 
 
 
-
 
NC_009636  Smed_2146  extracellular solute-binding protein  29.12 
 
 
414 aa  97.8  4e-19  Sinorhizobium medicae WSM419  Bacteria  normal  normal 
 
 
-
 
NC_012850  Rleg_3910  extracellular solute-binding protein family 1  27.57 
 
 
412 aa  96.3  1e-18  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.198843 
 
 
-
 
NC_011369  Rleg2_3622  extracellular solute-binding protein family 1  26.19 
 
 
412 aa  95.5  2e-18  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal 
 
 
-
 
NC_013521  Sked_03090  ABC-type sugar transport system, periplasmic component  30.48 
 
 
419 aa  92.4  2e-17  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.033461  normal 
 
 
-
 
NC_013721  HMPREF0424_1316  extracellular solute-binding protein  23.84 
 
 
423 aa  89.7  1e-16  Gardnerella vaginalis 409-05  Bacteria  n/a    normal 
 
 
-
 
NC_009616  Tmel_0690  extracellular solute-binding protein  28.9 
 
 
402 aa  89.4  1e-16  Thermosipho melanesiensis BI429  Bacteria  normal  0.678935  n/a   
 
 
-
 
NC_012858  Rleg_6765  extracellular solute-binding protein family 1  24.64 
 
 
419 aa  87.4  4e-16  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.979933  normal 
 
 
-
 
NC_011988  Avi_5398  ABC transporter substrate binding protein (sugar)  29.29 
 
 
403 aa  87.8  4e-16  Agrobacterium vitis S4  Bacteria  normal  0.14652  n/a   
 
 
-
 
NC_012854  Rleg_6528  extracellular solute-binding protein family 1  29.18 
 
 
415 aa  87.4  4e-16  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.0147922 
 
 
-
 
NC_009921  Franean1_3944  extracellular solute-binding protein  27.24 
 
 
464 aa  87.4  5e-16  Frankia sp. EAN1pec  Bacteria  normal  0.920276  normal  0.0416082 
 
 
-
 
NC_011366  Rleg2_5852  extracellular solute-binding protein family 1  24.64 
 
 
419 aa  85.9  0.000000000000001  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal 
 
 
-
 
NC_012669  Bcav_1711  extracellular solute-binding protein family 1  29.15 
 
 
454 aa  85.9  0.000000000000002  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.795485  normal 
 
 
-
 
NC_012669  Bcav_1708  extracellular solute-binding protein family 1  26.55 
 
 
458 aa  84.7  0.000000000000003  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.190784  normal 
 
 
-
 
NC_009939  Dgeo_2919  ABC-type sugar transport system, periplasmic component  27.35 
 
 
407 aa  84  0.000000000000005  Deinococcus geothermalis DSM 11300  Bacteria  n/a    n/a   
 
 
-
 
NC_013411  GYMC61_1727  extracellular solute-binding protein family 1  23.01 
 
 
422 aa  82  0.00000000000002  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_007777  Francci3_2834  extracellular solute-binding protein  27.24 
 
 
459 aa  81.3  0.00000000000003  Frankia sp. CcI3  Bacteria  normal  0.873121  normal 
 
 
-
 
NC_008243  Meso_4520  extracellular solute-binding protein  26.92 
 
 
415 aa  80.5  0.00000000000007  Chelativorans sp. BNC1  Bacteria  normal  n/a   
 
 
-
 
NC_012852  Rleg_6156  extracellular solute-binding protein family 1  26.15 
 
 
410 aa  80.1  0.00000000000007  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.889741  hitchhiker  0.000305646 
 
 
-
 
NC_011371  Rleg2_6572  extracellular solute-binding protein family 1  26.15 
 
 
410 aa  80.1  0.00000000000008  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  decreased coverage  0.00103217  normal  0.480926 
 
 
-
 
NC_009620  Smed_4916  extracellular solute-binding protein  26.19 
 
 
410 aa  79.3  0.0000000000001  Sinorhizobium medicae WSM419  Bacteria  normal  0.06645  normal  0.512511 
 
 
-
 
NC_007802  Jann_3553  extracellular solute-binding protein  26.62 
 
 
419 aa  79  0.0000000000002  Jannaschia sp. CCS1  Bacteria  normal  normal 
 
 
-
 
NC_011899  Hore_20630  extracellular solute-binding protein family 1  25.86 
 
 
414 aa  79  0.0000000000002  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_0296  hypothetical protein  27.61 
 
 
439 aa  79  0.0000000000002  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_009620  Smed_4644  extracellular solute-binding protein  31.02 
 
 
409 aa  78.6  0.0000000000002  Sinorhizobium medicae WSM419  Bacteria  normal  0.0265502  normal  0.0904039 
 
 
-
 
NC_010320  Teth514_2201  extracellular solute-binding protein  25.58 
 
 
420 aa  78.2  0.0000000000003  Thermoanaerobacter sp. X514  Bacteria  normal  0.455559  n/a   
 
 
-
 
NC_009636  Smed_2420  extracellular solute-binding protein  25.26 
 
 
420 aa  76.6  0.0000000000009  Sinorhizobium medicae WSM419  Bacteria  normal  normal  0.228974 
 
 
-
 
NC_010003  Pmob_0721  extracellular solute-binding protein  24.66 
 
 
437 aa  76.6  0.000000000001  Petrotoga mobilis SJ95  Bacteria  normal  0.540981  n/a   
 
 
-
 
NC_012793  GWCH70_1392  extracellular solute-binding protein family 1  25.08 
 
 
445 aa  75.9  0.000000000001  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_011369  Rleg2_3669  extracellular solute-binding protein family 1  23.49 
 
 
492 aa  75.1  0.000000000002  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_2832  extracellular solute-binding protein family 1  31.78 
 
 
417 aa  75.5  0.000000000002  Actinosynnema mirum DSM 43827  Bacteria  normal  0.617934  n/a   
 
 
-
 
NC_009667  Oant_2485  extracellular solute-binding protein  24.07 
 
 
415 aa  75.9  0.000000000002  Ochrobactrum anthropi ATCC 49188  Bacteria  decreased coverage  0.00421769  n/a   
 
 
-
 
NC_012848  Rleg_4863  extracellular solute-binding protein family 1  23.95 
 
 
492 aa  74.7  0.000000000003  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.426159 
 
 
-
 
NC_011366  Rleg2_5687  extracellular solute-binding protein family 1  40.5 
 
 
401 aa  75.1  0.000000000003  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.627079  normal 
 
 
-
 
NC_008262  CPR_0476  ABC transporter, substrate-binding protein  25.07 
 
 
427 aa  75.1  0.000000000003  Clostridium perfringens SM101  Bacteria  normal  n/a   
 
 
-
 
NC_009667  Oant_0354  extracellular solute-binding protein  24.06 
 
 
419 aa  74.3  0.000000000004  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.188589  n/a   
 
 
-
 
NC_013595  Sros_4988  extracellular solute-binding protein  25.33 
 
 
414 aa  74.3  0.000000000005  Streptosporangium roseum DSM 43021  Bacteria  normal  0.601947  normal 
 
 
-
 
NC_013525  Tter_0829  extracellular solute-binding protein family 1  24.46 
 
 
504 aa  73.9  0.000000000006  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_008541  Arth_3146  extracellular solute-binding protein  24.56 
 
 
424 aa  73.6  0.000000000007  Arthrobacter sp. FB24  Bacteria  normal  0.0629231  n/a   
 
 
-
 
NC_013202  Hmuk_0944  extracellular solute-binding protein family 1  27.81 
 
 
433 aa  73.2  0.00000000001  Halomicrobium mukohataei DSM 12286  Archaea  normal  normal  0.322748 
 
 
-
 
NC_012858  Rleg_6631  extracellular solute-binding protein family 1  36.75 
 
 
410 aa  72.4  0.00000000002  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.325237 
 
 
-
 
NC_008043  TM1040_3216  extracellular solute-binding protein  26.15 
 
 
425 aa  72  0.00000000002  Ruegeria sp. TM1040  Bacteria  normal  normal  0.949389 
 
 
-
 
NC_013947  Snas_0203  extracellular solute-binding protein family 1  25.3 
 
 
441 aa  72  0.00000000002  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.346278  normal  0.123927 
 
 
-
 
NC_009012  Cthe_1020  extracellular solute-binding protein  23.61 
 
 
459 aa  72  0.00000000002  Clostridium thermocellum ATCC 27405  Bacteria  unclonable  0.0000000124434  n/a   
 
 
-
 
NC_013131  Caci_4697  extracellular solute-binding protein family 1  29.27 
 
 
442 aa  71.6  0.00000000003  Catenulispora acidiphila DSM 44928  Bacteria  hitchhiker  0.00367387  normal 
 
 
-
 
NC_008698  Tpen_1453  extracellular solute-binding protein  23.93 
 
 
415 aa  71.6  0.00000000003  Thermofilum pendens Hrk 5  Archaea  normal  0.0104666  n/a   
 
 
-
 
NC_013517  Sterm_4038  extracellular solute-binding protein family 1  22.02 
 
 
405 aa  71.2  0.00000000004  Sebaldella termitidis ATCC 33386  Bacteria  normal  n/a   
 
 
-
 
NC_011899  Hore_19770  extracellular solute-binding protein family 1  28.07 
 
 
423 aa  70.9  0.00000000004  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_013946  Mrub_0045  extracellular solute-binding protein family 1  29.06 
 
 
414 aa  71.2  0.00000000004  Meiothermus ruber DSM 1279  Bacteria  normal  0.713374  normal 
 
 
-
 
NC_011988  Avi_6240  ABC transporter substrate binding protein (maltose)  35.54 
 
 
407 aa  70.9  0.00000000005  Agrobacterium vitis S4  Bacteria  normal  0.0994607  n/a   
 
 
-
 
NC_009380  Strop_0803  extracellular solute-binding protein  24.79 
 
 
433 aa  70.9  0.00000000005  Salinispora tropica CNB-440  Bacteria  normal  0.437157  normal 
 
 
-
 
NC_009074  BURPS668_3697  glycerol-3-phosphate transporter periplasmic binding protein  27.68 
 
 
441 aa  70.5  0.00000000006  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_014165  Tbis_1886  extracellular solute-binding protein family 1  24.22 
 
 
435 aa  70.5  0.00000000006  Thermobispora bispora DSM 43833  Bacteria  normal  normal  0.23125 
 
 
-
 
NC_013745  Htur_4488  extracellular solute-binding protein family 1  27.19 
 
 
434 aa  70.5  0.00000000006  Haloterrigena turkmenica DSM 5511  Archaea  normal  0.395657  n/a   
 
 
-
 
NC_009076  BURPS1106A_3755  glycerol-3-phosphate transporter periplasmic binding protein  27.23 
 
 
441 aa  70.1  0.00000000007  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_010001  Cphy_2308  extracellular solute-binding protein  25.77 
 
 
440 aa  70.1  0.00000000009  Clostridium phytofermentans ISDg  Bacteria  hitchhiker  0.000000253431  n/a   
 
 
-
 
NC_008783  BARBAKC583_0349  glycerol-3-phosphate ABC transporter, periplasmic glycerol-3-phosphate-binding protein  26.12 
 
 
441 aa  69.7  0.00000000009  Bartonella bacilliformis KC583  Bacteria  normal  n/a   
 
 
-
 
NC_006348  BMA2744  glycerol-3-phosphate transporter periplasmic binding protein  27.56 
 
 
441 aa  69.3  0.0000000001  Burkholderia mallei ATCC 23344  Bacteria  normal  n/a   
 
 
-
 
NC_007434  BURPS1710b_3726  glycerol-3-phosphate transporter periplasmic binding protein  27.56 
 
 
441 aa  69.3  0.0000000001  Burkholderia pseudomallei 1710b  Bacteria  normal  0.268589  n/a   
 
 
-
 
NC_011661  Dtur_1732  extracellular solute-binding protein family 1  25.12 
 
 
415 aa  69.3  0.0000000001  Dictyoglomus turgidum DSM 6724  Bacteria  unclonable  0.000000000368486  n/a   
 
 
-
 
NC_008785  BMASAVP1_A3209  glycerol-3-phosphate transporter periplasmic binding protein  27.56 
 
 
441 aa  69.3  0.0000000001  Burkholderia mallei SAVP1  Bacteria  normal  0.0248662  n/a   
 
 
-
 
NC_008836  BMA10229_A1760  glycerol-3-phosphate transporter periplasmic binding protein  27.56 
 
 
441 aa  69.3  0.0000000001  Burkholderia mallei NCTC 10229  Bacteria  normal  n/a   
 
 
-
 
NC_009080  BMA10247_2794  glycerol-3-phosphate transporter periplasmic binding protein  27.56 
 
 
441 aa  69.3  0.0000000001  Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
NC_010159  YpAngola_A1068  sugar ABC transporter periplasmic sugar-binding protein  25.08 
 
 
390 aa  69.3  0.0000000001  Yersinia pestis Angola  Bacteria  normal  normal  0.238718 
 
 
-
 
NC_009708  YpsIP31758_0528  sugar ABC transporter, periplasmic sugar-binding protein  25.08 
 
 
414 aa  69.3  0.0000000001  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  n/a   
 
 
-
 
NC_011992  Dtpsy_2659  extracellular solute-binding protein family 1  25.35 
 
 
431 aa  69.3  0.0000000001  Acidovorax ebreus TPSY  Bacteria  decreased coverage  0.00136924  n/a   
 
 
-
 
NC_007413  Ava_1229  extracellular solute-binding protein  24.18 
 
 
461 aa  68.6  0.0000000002  Anabaena variabilis ATCC 29413  Bacteria  normal  0.0257979  normal  0.868479 
 
 
-
 
NC_007644  Moth_1484  extracellular solute-binding protein  23.91 
 
 
444 aa  68.6  0.0000000002  Moorella thermoacetica ATCC 39073  Bacteria  unclonable  0.00000000000980441  normal 
 
 
-
 
NC_013947  Snas_2758  extracellular solute-binding protein family 1  22.37 
 
 
423 aa  68.9  0.0000000002  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.736779  normal 
 
 
-
 
NC_009953  Sare_0747  extracellular solute-binding protein  24.44 
 
 
433 aa  68.6  0.0000000003  Salinispora arenicola CNS-205  Bacteria  normal  hitchhiker  0.00190936 
 
 
-
 
NC_010003  Pmob_0289  extracellular solute-binding protein  24.38 
 
 
437 aa  68.2  0.0000000003  Petrotoga mobilis SJ95  Bacteria  unclonable  0.00000019091  n/a   
 
 
-
 
NC_013526  Tter_2451  extracellular solute-binding protein family 1  26.5 
 
 
449 aa  68.2  0.0000000003  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  0.135643  n/a   
 
 
-
 
NC_009668  Oant_3895  extracellular solute-binding protein  26.91 
 
 
411 aa  68.6  0.0000000003  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  n/a   
 
 
-
 
NC_013739  Cwoe_5802  extracellular solute-binding protein family 1  24.9 
 
 
444 aa  68.6  0.0000000003  Conexibacter woesei DSM 14684  Bacteria  normal  normal  0.0809589 
 
 
-
 
NC_013739  Cwoe_4883  extracellular solute-binding protein family 1  26.26 
 
 
436 aa  67.8  0.0000000004  Conexibacter woesei DSM 14684  Bacteria  normal  0.504344  normal 
 
 
-
 
NC_010465  YPK_0589  extracellular solute-binding protein  24.75 
 
 
414 aa  67.8  0.0000000004  Yersinia pseudotuberculosis YPIII  Bacteria  normal  n/a   
 
 
-
 
NC_011661  Dtur_0381  extracellular solute-binding protein family 1  23.93 
 
 
421 aa  67.8  0.0000000004  Dictyoglomus turgidum DSM 6724  Bacteria  normal  n/a   
 
 
-
 
NC_013411  GYMC61_2845  extracellular solute-binding protein family 1  24.75 
 
 
439 aa  67.4  0.0000000005  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_011884  Cyan7425_3276  extracellular solute-binding protein family 1  23.96 
 
 
420 aa  67.4  0.0000000005  Cyanothece sp. PCC 7425  Bacteria  normal  0.147153  normal  0.336546 
 
 
-
 
NC_013421  Pecwa_0845  extracellular solute-binding protein family 1  29.74 
 
 
435 aa  67.4  0.0000000006  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_013174  Jden_0513  extracellular solute-binding protein family 1  25.41 
 
 
447 aa  67.4  0.0000000006  Jonesia denitrificans DSM 20603  Bacteria  decreased coverage  0.000000038068  hitchhiker  0.000703825 
 
 
-
 
NC_008782  Ajs_3306  extracellular solute-binding protein  25.69 
 
 
431 aa  67.4  0.0000000006  Acidovorax sp. JS42  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_1927  extracellular solute-binding protein family 1  26.06 
 
 
439 aa  67  0.0000000006  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_014212  Mesil_2466  extracellular solute-binding protein family 1  23.53 
 
 
415 aa  66.6  0.0000000008  Meiothermus silvanus DSM 9946  Bacteria  normal  normal  0.0930087 
 
 
-
 
NC_012912  Dd1591_3386  extracellular solute-binding protein family 1  28.18 
 
 
440 aa  66.6  0.0000000008  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_2846  extracellular solute-binding protein family 1  29.28 
 
 
435 aa  66.6  0.0000000008  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal  0.687638 
 
 
-
 
NC_009664  Krad_0385  extracellular solute-binding protein family 1  27.87 
 
 
410 aa  66.6  0.0000000008  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal  0.0390662 
 
 
-
 
NC_007651  BTH_I3021  glycerol-3-phosphate transporter periplasmic binding protein  26.67 
 
 
441 aa  66.6  0.0000000009  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
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