More than 300 homologs were found in PanDaTox collection
for query gene Bcav_0310 on replicon NC_012669
Organism: Beutenbergia cavernae DSM 12333



Page 1 of 3    << first  < prev  1  2  3    next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_012669  Bcav_0310  extracellular solute-binding protein family 1  100 
 
 
443 aa  899    Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_009767  Rcas_2546  extracellular solute-binding protein  27.96 
 
 
488 aa  105  2e-21  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.39868  normal  0.139719 
 
 
-
 
NC_003909  BCE_1899  extracellular solute-binding protein, putative  27.27 
 
 
416 aa  102  1e-20  Bacillus cereus ATCC 10987  Bacteria  normal  0.41529  n/a   
 
 
-
 
NC_006274  BCZK1634  sugar ABC transporter, sugar-binding protein  27.27 
 
 
416 aa  102  1e-20  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_013411  GYMC61_2731  extracellular solute-binding protein family 1  24.26 
 
 
454 aa  102  1e-20  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_009523  RoseRS_2818  extracellular solute-binding protein  27.21 
 
 
488 aa  102  1e-20  Roseiflexus sp. RS-1  Bacteria  normal  0.179577  normal 
 
 
-
 
NC_013521  Sked_27690  ABC-type sugar transport system, periplasmic component  27.32 
 
 
431 aa  101  3e-20  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal  0.340884 
 
 
-
 
NC_008262  CPR_0476  ABC transporter, substrate-binding protein  25.67 
 
 
427 aa  100  4e-20  Clostridium perfringens SM101  Bacteria  normal  n/a   
 
 
-
 
NC_011831  Cagg_0729  extracellular solute-binding protein family 1  24.74 
 
 
443 aa  96.3  1e-18  Chloroflexus aggregans DSM 9485  Bacteria  decreased coverage  0.0000254304  normal 
 
 
-
 
NC_009767  Rcas_0274  extracellular solute-binding protein  26.75 
 
 
439 aa  95.9  1e-18  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.285114  normal 
 
 
-
 
NC_013526  Tter_2315  extracellular solute-binding protein family 1  25.84 
 
 
503 aa  94.4  4e-18  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_013526  Tter_2504  extracellular solute-binding protein family 1  26.01 
 
 
442 aa  94  5e-18  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_013526  Tter_2524  extracellular solute-binding protein family 1  24.66 
 
 
483 aa  92.8  1e-17  Thermobaculum terrenum ATCC BAA-798  Bacteria  decreased coverage  0.00000000331289  n/a   
 
 
-
 
NC_013525  Tter_0508  extracellular solute-binding protein family 1  25.39 
 
 
514 aa  92.8  1e-17  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_013172  Bfae_29320  ABC-type sugar transport system, periplasmic component  26.9 
 
 
443 aa  91.7  3e-17  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_013411  GYMC61_1727  extracellular solute-binding protein family 1  25.71 
 
 
422 aa  90.9  4e-17  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_010320  Teth514_2201  extracellular solute-binding protein  25.08 
 
 
420 aa  90.9  5e-17  Thermoanaerobacter sp. X514  Bacteria  normal  0.455559  n/a   
 
 
-
 
NC_011831  Cagg_2267  extracellular solute-binding protein family 1  25.17 
 
 
445 aa  90.5  5e-17  Chloroflexus aggregans DSM 9485  Bacteria  normal  hitchhiker  0.00064551 
 
 
-
 
NC_009523  RoseRS_0263  extracellular solute-binding protein  27.16 
 
 
439 aa  90.1  7e-17  Roseiflexus sp. RS-1  Bacteria  normal  0.962251  hitchhiker  0.00117926 
 
 
-
 
NC_013174  Jden_0513  extracellular solute-binding protein family 1  25 
 
 
447 aa  88.6  2e-16  Jonesia denitrificans DSM 20603  Bacteria  decreased coverage  0.000000038068  hitchhiker  0.000703825 
 
 
-
 
NC_011899  Hore_15560  extracellular solute-binding protein family 1  24.43 
 
 
418 aa  87  6e-16  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_012793  GWCH70_1392  extracellular solute-binding protein family 1  27.04 
 
 
445 aa  85.9  0.000000000000001  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_013172  Bfae_06270  ABC-type sugar transport system, periplasmic component  27.81 
 
 
426 aa  85.1  0.000000000000002  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_010320  Teth514_1099  extracellular solute-binding protein  24.92 
 
 
457 aa  85.5  0.000000000000002  Thermoanaerobacter sp. X514  Bacteria  normal  n/a   
 
 
-
 
NC_013159  Svir_16660  ABC-type sugar transport system, periplasmic component  23.92 
 
 
406 aa  83.6  0.000000000000006  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.613471  normal 
 
 
-
 
NC_008262  CPR_0904  ABC transporter, periplasmic substrate-binding protein, putative  27.47 
 
 
439 aa  83.2  0.00000000000001  Clostridium perfringens SM101  Bacteria  decreased coverage  0.00221898  n/a   
 
 
-
 
NC_010184  BcerKBAB4_0483  extracellular solute-binding protein  26.67 
 
 
458 aa  82  0.00000000000002  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_011661  Dtur_0381  extracellular solute-binding protein family 1  26.1 
 
 
421 aa  81.6  0.00000000000002  Dictyoglomus turgidum DSM 6724  Bacteria  normal  n/a   
 
 
-
 
NC_011368  Rleg2_5349  extracellular solute-binding protein family 1  26.92 
 
 
406 aa  82  0.00000000000002  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal  0.535832 
 
 
-
 
NC_013595  Sros_3538  Maltose-binding periplasmic protein/domains- like protein  24.66 
 
 
406 aa  81.3  0.00000000000003  Streptosporangium roseum DSM 43021  Bacteria  normal  0.385239  normal 
 
 
-
 
NC_011894  Mnod_6751  extracellular solute-binding protein family 1  28.03 
 
 
441 aa  80.9  0.00000000000004  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_009832  Spro_2571  extracellular solute-binding protein  23.78 
 
 
417 aa  80.9  0.00000000000004  Serratia proteamaculans 568  Bacteria  normal  normal 
 
 
-
 
NC_012669  Bcav_1680  extracellular solute-binding protein family 1  27.85 
 
 
430 aa  79.7  0.00000000000008  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.173253  normal 
 
 
-
 
NC_008541  Arth_3143  extracellular solute-binding protein  24.79 
 
 
473 aa  80.1  0.00000000000008  Arthrobacter sp. FB24  Bacteria  normal  0.536467  n/a   
 
 
-
 
NC_007777  Francci3_2252  extracellular solute-binding protein  26.82 
 
 
469 aa  79.3  0.0000000000001  Frankia sp. CcI3  Bacteria  hitchhiker  0.00844632  hitchhiker  0.0063434 
 
 
-
 
NC_011658  BCAH187_A0700  putative glycerol-3-phosphate ABC transporter, glycerol-3-phosphate-binding protein  27.01 
 
 
458 aa  79.3  0.0000000000001  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_012852  Rleg_6112  extracellular solute-binding protein family 1  25.24 
 
 
424 aa  79.3  0.0000000000001  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.521338  normal 
 
 
-
 
NC_013526  Tter_2513  extracellular solute-binding protein family 1  25.89 
 
 
441 aa  79.3  0.0000000000001  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_009667  Oant_0637  extracellular solute-binding protein  24.62 
 
 
425 aa  78.6  0.0000000000002  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  n/a   
 
 
-
 
NC_003909  BCE_0632  glycerol-3-phosphate ABC transporter, glycerol-3-phosphate-binding protein, putative  27.72 
 
 
458 aa  78.2  0.0000000000003  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_009523  RoseRS_1359  extracellular solute-binding protein  25.8 
 
 
458 aa  77.8  0.0000000000003  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_011772  BCG9842_B4733  putative glycerol-3-phosphate ABC transporter, glycerol-3-phosphate-binding protein  27.31 
 
 
458 aa  78.2  0.0000000000003  Bacillus cereus G9842  Bacteria  normal  normal 
 
 
-
 
NC_011725  BCB4264_A0606  putative glycerol-3-phosphate ABC transporter, glycerol-3-phosphate-binding protein  27.31 
 
 
458 aa  77.8  0.0000000000003  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_009565  TBFG_12078  sugar-binding lipoprotein  26.65 
 
 
439 aa  77.8  0.0000000000004  Mycobacterium tuberculosis F11  Bacteria  normal  normal 
 
 
-
 
NC_005945  BAS0538  glycerol-3-phosphate ABC transporter glycerol-3-phosphate-binding protein  26.94 
 
 
458 aa  77.4  0.0000000000005  Bacillus anthracis str. Sterne  Bacteria  normal  0.406699  n/a   
 
 
-
 
NC_005957  BT9727_0480  glycerol-3-phosphate ABC transporter, glycerol-3-phosphate-binding protein  26.94 
 
 
458 aa  77.4  0.0000000000005  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_006274  BCZK0482  glycerol-3-phosphate ABC transporter, glycerol-3-phosphate-binding protein  26.94 
 
 
458 aa  77.4  0.0000000000005  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_007530  GBAA_0569  glycerol-3-phosphate ABC transporter glycerol-3-phosphate-binding protein  26.94 
 
 
458 aa  77.4  0.0000000000005  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_011371  Rleg2_6524  extracellular solute-binding protein family 1  24.6 
 
 
424 aa  77  0.0000000000006  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.514278  normal  0.451088 
 
 
-
 
NC_011773  BCAH820_0625  putative glycerol-3-phosphate ABC transporter, glycerol-3-phosphate-binding protein  26.94 
 
 
458 aa  77  0.0000000000006  Bacillus cereus AH820  Bacteria  n/a    normal 
 
 
-
 
NC_010511  M446_6664  extracellular solute-binding protein  28.51 
 
 
452 aa  76.6  0.0000000000008  Methylobacterium sp. 4-46  Bacteria  normal  normal  0.0689323 
 
 
-
 
NC_009767  Rcas_0516  extracellular solute-binding protein  25.83 
 
 
488 aa  76.3  0.0000000000009  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal 
 
 
-
 
NC_013525  Tter_0265  extracellular solute-binding protein family 1  25.07 
 
 
510 aa  75.9  0.000000000001  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_012912  Dd1591_3386  extracellular solute-binding protein family 1  27.1 
 
 
440 aa  76.3  0.000000000001  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_009620  Smed_4916  extracellular solute-binding protein  25.22 
 
 
410 aa  75.9  0.000000000001  Sinorhizobium medicae WSM419  Bacteria  normal  0.06645  normal  0.512511 
 
 
-
 
NC_012669  Bcav_1296  extracellular solute-binding protein family 1  25.21 
 
 
443 aa  75.5  0.000000000002  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.190784  normal 
 
 
-
 
NC_012669  Bcav_0192  extracellular solute-binding protein family 1  28.88 
 
 
444 aa  75.5  0.000000000002  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.25123  normal 
 
 
-
 
NC_009953  Sare_0747  extracellular solute-binding protein  24.59 
 
 
433 aa  75.1  0.000000000002  Salinispora arenicola CNS-205  Bacteria  normal  hitchhiker  0.00190936 
 
 
-
 
NC_009523  RoseRS_3149  extracellular solute-binding protein  23.15 
 
 
427 aa  74.7  0.000000000003  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_013521  Sked_06340  maltose-binding periplasmic protein  26.42 
 
 
409 aa  74.3  0.000000000004  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.211092  normal 
 
 
-
 
NC_013526  Tter_2137  extracellular solute-binding protein family 1  23.35 
 
 
467 aa  73.9  0.000000000005  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_009523  RoseRS_3619  extracellular solute-binding protein  26.1 
 
 
488 aa  73.9  0.000000000005  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_013172  Bfae_05090  ABC-type sugar transport system, periplasmic component  26.19 
 
 
430 aa  73.6  0.000000000006  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_010003  Pmob_0289  extracellular solute-binding protein  22.48 
 
 
437 aa  73.6  0.000000000007  Petrotoga mobilis SJ95  Bacteria  unclonable  0.00000019091  n/a   
 
 
-
 
NC_012669  Bcav_1655  extracellular solute-binding protein family 1  26.8 
 
 
425 aa  73.2  0.000000000008  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.186521  normal  0.186231 
 
 
-
 
NC_013946  Mrub_0045  extracellular solute-binding protein family 1  28.06 
 
 
414 aa  72.4  0.00000000001  Meiothermus ruber DSM 1279  Bacteria  normal  0.713374  normal 
 
 
-
 
NC_009380  Strop_0803  extracellular solute-binding protein  24.92 
 
 
433 aa  72.8  0.00000000001  Salinispora tropica CNB-440  Bacteria  normal  0.437157  normal 
 
 
-
 
NC_013526  Tter_2218  extracellular solute-binding protein family 1  22.59 
 
 
479 aa  72.8  0.00000000001  Thermobaculum terrenum ATCC BAA-798  Bacteria  hitchhiker  0.00910899  n/a   
 
 
-
 
NC_012669  Bcav_0829  extracellular solute-binding protein family 1  25.05 
 
 
465 aa  72  0.00000000002  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal  0.308126 
 
 
-
 
NC_009636  Smed_2315  extracellular solute-binding protein  25.37 
 
 
455 aa  71.6  0.00000000002  Sinorhizobium medicae WSM419  Bacteria  normal  normal  0.271919 
 
 
-
 
NC_009767  Rcas_3566  extracellular solute-binding protein  25.25 
 
 
454 aa  71.6  0.00000000002  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.42847  normal  0.297516 
 
 
-
 
NC_013131  Caci_7906  extracellular solute-binding protein family 1  24.1 
 
 
420 aa  71.6  0.00000000003  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.819994  normal 
 
 
-
 
NC_013530  Xcel_0917  extracellular solute-binding protein family 1  28.35 
 
 
455 aa  71.2  0.00000000003  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.728334  n/a   
 
 
-
 
NC_013595  Sros_4988  extracellular solute-binding protein  23.32 
 
 
414 aa  70.9  0.00000000004  Streptosporangium roseum DSM 43021  Bacteria  normal  0.601947  normal 
 
 
-
 
NC_013526  Tter_2474  extracellular solute-binding protein family 1  22.8 
 
 
484 aa  70.9  0.00000000004  Thermobaculum terrenum ATCC BAA-798  Bacteria  hitchhiker  0.0000108946  n/a   
 
 
-
 
NC_010003  Pmob_0721  extracellular solute-binding protein  22.15 
 
 
437 aa  70.5  0.00000000006  Petrotoga mobilis SJ95  Bacteria  normal  0.540981  n/a   
 
 
-
 
NC_012034  Athe_0399  extracellular solute-binding protein family 1  21.72 
 
 
408 aa  70.1  0.00000000008  Anaerocellum thermophilum DSM 6725  Bacteria  unclonable  0.00000000195685  n/a   
 
 
-
 
NC_013205  Aaci_0075  extracellular solute-binding protein family 1  26.29 
 
 
441 aa  69.7  0.00000000009  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  n/a   
 
 
-
 
NC_013530  Xcel_1138  extracellular solute-binding protein family 1  28.3 
 
 
423 aa  69.7  0.00000000009  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.443513  n/a   
 
 
-
 
NC_013517  Sterm_4038  extracellular solute-binding protein family 1  25.46 
 
 
405 aa  69.7  0.0000000001  Sebaldella termitidis ATCC 33386  Bacteria  normal  n/a   
 
 
-
 
NC_014212  Mesil_2466  extracellular solute-binding protein family 1  24.32 
 
 
415 aa  69.3  0.0000000001  Meiothermus silvanus DSM 9946  Bacteria  normal  normal  0.0930087 
 
 
-
 
NC_013205  Aaci_0913  extracellular solute-binding protein family 1  23.42 
 
 
421 aa  69.3  0.0000000001  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  n/a   
 
 
-
 
NC_011886  Achl_3271  extracellular solute-binding protein family 1  23.53 
 
 
473 aa  69.3  0.0000000001  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_012669  Bcav_1698  extracellular solute-binding protein family 1  26.05 
 
 
447 aa  69.3  0.0000000001  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_008699  Noca_1420  extracellular solute-binding protein  21.85 
 
 
424 aa  68.6  0.0000000002  Nocardioides sp. JS614  Bacteria  normal  0.979516  n/a   
 
 
-
 
NC_012669  Bcav_1955  extracellular solute-binding protein family 1  26.85 
 
 
419 aa  68.6  0.0000000002  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.974693  hitchhiker  0.000475348 
 
 
-
 
NC_009921  Franean1_3944  extracellular solute-binding protein  25.23 
 
 
464 aa  68.6  0.0000000002  Frankia sp. EAN1pec  Bacteria  normal  0.920276  normal  0.0416082 
 
 
-
 
NC_009939  Dgeo_2919  ABC-type sugar transport system, periplasmic component  23.38 
 
 
407 aa  68.6  0.0000000002  Deinococcus geothermalis DSM 11300  Bacteria  n/a    n/a   
 
 
-
 
NC_010003  Pmob_0144  extracellular solute-binding protein  27.03 
 
 
403 aa  68.9  0.0000000002  Petrotoga mobilis SJ95  Bacteria  normal  0.442205  n/a   
 
 
-
 
NC_008043  TM1040_3216  extracellular solute-binding protein  25.85 
 
 
425 aa  68.2  0.0000000003  Ruegeria sp. TM1040  Bacteria  normal  normal  0.949389 
 
 
-
 
NC_013517  Sterm_0719  extracellular solute-binding protein family 1  22.83 
 
 
413 aa  68.2  0.0000000003  Sebaldella termitidis ATCC 33386  Bacteria  normal  0.0236757  n/a   
 
 
-
 
NC_012669  Bcav_1522  extracellular solute-binding protein family 1  24.64 
 
 
421 aa  68.2  0.0000000003  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.569671  normal 
 
 
-
 
NC_013946  Mrub_0791  extracellular solute-binding protein family 1  25.49 
 
 
399 aa  68.2  0.0000000003  Meiothermus ruber DSM 1279  Bacteria  normal  normal  0.418273 
 
 
-
 
NC_009664  Krad_3459  extracellular solute-binding protein family 1  29.89 
 
 
458 aa  68.2  0.0000000003  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.725469  normal 
 
 
-
 
NC_013595  Sros_4883  ABC-type sugar transport system periplasmic component-like protein  26.11 
 
 
417 aa  68.2  0.0000000003  Streptosporangium roseum DSM 43021  Bacteria  normal  0.134037  normal  0.0630481 
 
 
-
 
NC_013526  Tter_2574  extracellular solute-binding protein family 1  22.7 
 
 
453 aa  67.4  0.0000000004  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_012852  Rleg_6156  extracellular solute-binding protein family 1  23.52 
 
 
410 aa  67.4  0.0000000004  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.889741  hitchhiker  0.000305646 
 
 
-
 
NC_007644  Moth_1484  extracellular solute-binding protein  26.53 
 
 
444 aa  67.4  0.0000000005  Moorella thermoacetica ATCC 39073  Bacteria  unclonable  0.00000000000980441  normal 
 
 
-
 
NC_009486  Tpet_0322  extracellular solute-binding protein  23.44 
 
 
419 aa  67.4  0.0000000005  Thermotoga petrophila RKU-1  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_3988  extracellular solute-binding protein family 1  25.88 
 
 
422 aa  67.4  0.0000000005  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
Page 1 of 3    << first  < prev  1  2  3    next >  last >>