| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_0263 |
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| Symbol | |
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| ID | 5207198 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | - |
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| Start bp | 331594 |
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| End bp | 332913 |
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| Gene Length | 1320 bp |
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| Protein Length | 439 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640593892 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_001274648 |
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| Protein GI | 148654443 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.962251 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.00117926 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAACACC GCCTCTCGCT GCGCTCCGCG CTCTGTCTGC TGACGCTGTC TCCATTGCTT
GCCGCATGTG GCTGGTTTGC GCCGCCAACG CCGACGCCGA CGCCCGAACC GCGGGTGCTG
CGGGTATACA CGGTGCGTGA CCCGACGATC GAAGGGGTCG TTGAGATTAT CAGCCAGGGA
TTCCGTACCC GACATCCCGA TGTAACCATC GAATTCATCT ATGGCGATGG GAGTTATAGC
GAATTGCAGG GCAGCGCAGC CACCGGCAAC ATCCCCGATG TCGTCTGGGC GCCGGACGTG
ATAACGCCAG CGCTCATCGA GGCGGAACTG CTGCTCGACC TGGAAGAGTT CGCCAGGGGC
GACGGAAGCG TCAATCTGGA AGACGTGCAT CCAGTAGCGC TTGAACCTGG ACGGTCGCGC
GTTCGTCCCG GTCTCTACCT GATTCCCGCA TCCCTCGAAA CCATCCAGAT GTACTACAAT
AGTTCCTTGT GGGAACGCTC CGGCGCGCCG TTGCCGCGCG ACGATTGGAC GTGGGACGAT
CTGATTGCGG CATGTAAACG GGTGCAAGAA TCCACGCCGG GCGTCGATTG TCTGAGTTTC
ACGAATAGCG GATTGTTCGA CCACACCGCA TGGGTGTACT GGCTGCCATG GGTGCGCGGC
GCTGGCGGCG ATGCCCTCAG CGCCGACGGT GCGCAATCAA CGCTGAGTGC GCCGCAGTCG
CTCGAAGGGT TGCAGGGGTA CCTCGACCTC TGGATCCGGC ACAAGATCGC GGCACAACCG
GGCGCCAGCC AGGACGATTG TTTTGTTGCG CAAACGTGTG CGGCATTCTT CTCATTTGCC
GGCGCCGCAC GGATCTACCG TGAGCAAATC GGCGACCGCT TCGCGTGGGA CGTACAGATT
GTGCCAGCGC ATCGGGCAGG ACGTTTCACC GGTATCGGCT CATACGGCTT TGCCGTGACC
CGCGCTTCTC GCGAGCCGCA ACTGGCATGG GACTTTGTGA AATATATCAT CACGCCGGAA
GCGCAGCGCG CCATCGCTGC CGCCTATCTG GGCACGCCGG CGCTCCTGTC GCTGAGCAAC
GATCCGGCGG TGGTGCAGTT GCCGCCGCCG CTGGCGAATA TGCGCGCCTT CGTTGTCGGG
CGCGAGGCAG GCATTACGCC GCCGCGCTAC CCGACCGCCT GCGGCAGCGT CTACAACGGT
CCGGTTTCCG CTGCTATCGC CGATGCACTC AATGCTGCAC TACGCGAAAC AGTGTCGGTG
GAGGGCGCAT TTACTATTGC TGATCGCAAG ATACAGACCT GTCTGGACGC GAATCGGTAG
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| Protein sequence | MKHRLSLRSA LCLLTLSPLL AACGWFAPPT PTPTPEPRVL RVYTVRDPTI EGVVEIISQG
FRTRHPDVTI EFIYGDGSYS ELQGSAATGN IPDVVWAPDV ITPALIEAEL LLDLEEFARG
DGSVNLEDVH PVALEPGRSR VRPGLYLIPA SLETIQMYYN SSLWERSGAP LPRDDWTWDD
LIAACKRVQE STPGVDCLSF TNSGLFDHTA WVYWLPWVRG AGGDALSADG AQSTLSAPQS
LEGLQGYLDL WIRHKIAAQP GASQDDCFVA QTCAAFFSFA GAARIYREQI GDRFAWDVQI
VPAHRAGRFT GIGSYGFAVT RASREPQLAW DFVKYIITPE AQRAIAAAYL GTPALLSLSN
DPAVVQLPPP LANMRAFVVG REAGITPPRY PTACGSVYNG PVSAAIADAL NAALRETVSV
EGAFTIADRK IQTCLDANR
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