| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xcel_0917 |
|---|
| Symbol | |
|---|
| ID | 8648427 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xylanimonas cellulosilytica DSM 15894 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013530 |
|---|
| Strand | + |
|---|
| Start bp | 984193 |
|---|
| End bp | 985560 |
|---|
| Gene Length | 1368 bp |
|---|
| Protein Length | 455 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | |
|---|
| Product | extracellular solute-binding protein family 1 |
|---|
| Protein accession | YP_003325506 |
|---|
| Protein GI | 269955717 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.728334 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTGGGCGG CCGGCACGAC CGCCCGCGAC CGGACGAAGG AGTTCGAGAC GATGAGCGCA
ACGAAGCGCC GTGCGCGCAC CTGGGTCGCG GCGGCCGCCG TCCTGCCCCT GCTCGCGATG
ACGGCGGCCT GCTCCGGCGG CGCCGAGGGC ACCGAGGGCG GCAGCGAGGG TGGCGGCGAC
GGCAAGCTGA CCGTGTGGGC CTGGGATCCT GCCTTCAACA TCTTCGCGAT GGAGGAGGCC
GCCAAGATCT ACCAGGCCGA CCACCCGGAC TTCGAGATCG AGGTGGTCGA GACGCCGTGG
GACGACGTCC AGACCAAGCT CACGACGCTC GCCCAGTCGG GTGAGACCGG CCAGCTCCCC
GATATCTTCC TGATGCAGAA CAACGCGTTC CAGAAGAACG TCATCAACTA CCCCGAGCTG
TTCAGCGACT ACACCGGCTC CGACGTCGAC TTCTCGCAGT TCCCGCAGTC GGTGGTCGAC
TACTCGGTGG TCGACGGCGT CAACTACGGC CTGCCGTTCG ACAACGGCAC CGCCGTCACG
GGACTGCGCA CCGACGTGCT CGCGGAGGCC GGCTACACCA TCGACGACTT CACCGACATC
ACCTGGGACG AGTACATCGA GCTCGGCGAG GACGTCCTGG CGAAGACGGG CCAGCCGCTC
CTGTCCGGGG TGGCCGGCGA GGCGGACACG ATCATGATGA TGCTCCAGTC GGCCGGCGCC
TCGCTGTTCG ACGACGACGG CAACCCCACC ATCGGCGAGA ACGACGCCCT GCTGGCCGCG
ATCGACGTCT ACCACCGGCT CGCCGAGTCG GGCGTGCTGG CCGAACGGAA CTCGTGGGAC
GAGTACGTCG CCACCTTCGT CAACGGCGAG GTCGCGGGTG TCGTCAACGG CGTCTGGATC
CTCGGCTCCG TCCAGACGGC GCAGGACCAG GCGGGCGACT GGGCCATCAC CAACCTGCCC
CGGCTCGACG GCGTCGCCGG TGCGACGAAC TACTCGGCCA ACGGCGGGTC CTCGTGGGCG
ATCAGCGCGA ACGCCGACCG CGACCTCGCG ATCGACTTCC TCAACTCGAC CTTCGCCGGG
TCGACCGAGT TCTACGACAC GATCCTGCCG AGCTCGGGCG CGCTGGCGAA CTGGACCCCG
GCGGGCGAGA GCGACGTCTA CGCGGAGCCG CAGGAGTTCT TCGGCGGCGA CGCGATCTTC
TCCAAGGTCG TGGAGTACGC CACGCACGTG CCCAGCAACA ACACCGGCGC GTACTACTAC
GAGGGGCGTG ACGCGGTGAG CACCGCGATC ACGAAGATCA TGCAGGGCAC CGACCCGGCG
ACCGCGCTGG AGGAGGCGCA GAAGACCGTC GAGTTCGACA TGCAGTGA
|
|---|
| Protein sequence | MWAAGTTARD RTKEFETMSA TKRRARTWVA AAAVLPLLAM TAACSGGAEG TEGGSEGGGD
GKLTVWAWDP AFNIFAMEEA AKIYQADHPD FEIEVVETPW DDVQTKLTTL AQSGETGQLP
DIFLMQNNAF QKNVINYPEL FSDYTGSDVD FSQFPQSVVD YSVVDGVNYG LPFDNGTAVT
GLRTDVLAEA GYTIDDFTDI TWDEYIELGE DVLAKTGQPL LSGVAGEADT IMMMLQSAGA
SLFDDDGNPT IGENDALLAA IDVYHRLAES GVLAERNSWD EYVATFVNGE VAGVVNGVWI
LGSVQTAQDQ AGDWAITNLP RLDGVAGATN YSANGGSSWA ISANADRDLA IDFLNSTFAG
STEFYDTILP SSGALANWTP AGESDVYAEP QEFFGGDAIF SKVVEYATHV PSNNTGAYYY
EGRDAVSTAI TKIMQGTDPA TALEEAQKTV EFDMQ
|
|---|
| |