More than 300 homologs were found in PanDaTox collection
for query gene Rru_A0262 on replicon NC_007643
Organism: Rhodospirillum rubrum ATCC 11170



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007643  Rru_A0262  chemotaxis sensory transducer  100 
 
 
442 aa  885    Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.244306  n/a   
 
 
-
 
NC_009485  BBta_4739  methyl-accepting chemotaxis sensory transducer  34.24 
 
 
450 aa  202  9.999999999999999e-51  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_007925  RPC_1710  methyl-accepting chemotaxis sensory transducer  32.71 
 
 
449 aa  195  1e-48  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.140977  normal  0.0321459 
 
 
-
 
NC_010511  M446_5211  methyl-accepting chemotaxis sensory transducer  34.16 
 
 
445 aa  179  5.999999999999999e-44  Methylobacterium sp. 4-46  Bacteria  normal  0.351267  normal  0.0732889 
 
 
-
 
NC_011894  Mnod_5958  methyl-accepting chemotaxis sensory transducer  35.14 
 
 
445 aa  178  2e-43  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.28154  n/a   
 
 
-
 
NC_009485  BBta_0969  methyl-accepting chemotaxis sensory transducer  42.55 
 
 
562 aa  168  2e-40  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.956339  normal  0.570918 
 
 
-
 
NC_007643  Rru_A0120  chemotaxis sensory transducer  30.32 
 
 
445 aa  165  2.0000000000000002e-39  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.118781  n/a   
 
 
-
 
NC_007643  Rru_A3241  chemotaxis sensory transducer  35.98 
 
 
445 aa  162  1e-38  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.768967  n/a   
 
 
-
 
NC_010511  M446_6117  methyl-accepting chemotaxis sensory transducer  34.56 
 
 
713 aa  162  1e-38  Methylobacterium sp. 4-46  Bacteria  normal  0.140639  normal 
 
 
-
 
NC_007958  RPD_3107  chemotaxis sensory transducer  41.82 
 
 
674 aa  160  4e-38  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal  0.0664997 
 
 
-
 
NC_009485  BBta_6717  methyl-accepting chemotaxis sensory transducer  40.62 
 
 
741 aa  159  7e-38  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.447835  normal  0.587139 
 
 
-
 
NC_007925  RPC_1795  methyl-accepting chemotaxis sensory transducer  42.65 
 
 
561 aa  159  8e-38  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.432423  normal  0.0230577 
 
 
-
 
NC_007778  RPB_2358  methyl-accepting chemotaxis sensory transducer  41.09 
 
 
673 aa  159  1e-37  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal  0.207811 
 
 
-
 
NC_007958  RPD_0153  chemotaxis sensory transducer  46.26 
 
 
602 aa  156  6e-37  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_009485  BBta_2368  putative methyl-accepting chemotaxis receptor/sensory transducer precursor  38.13 
 
 
561 aa  155  1e-36  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.280114 
 
 
-
 
NC_011004  Rpal_2142  methyl-accepting chemotaxis sensory transducer  38.26 
 
 
428 aa  155  2e-36  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.293169  n/a   
 
 
-
 
NC_009485  BBta_6483  methyl-accepting chemotaxis protein  42.03 
 
 
565 aa  154  4e-36  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.877741  normal 
 
 
-
 
NC_009485  BBta_2904  putative methyl-accepting chemotaxis protein  40.14 
 
 
568 aa  152  8e-36  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.481458  normal  0.283558 
 
 
-
 
NC_011004  Rpal_5119  methyl-accepting chemotaxis sensory transducer  39.1 
 
 
563 aa  152  8.999999999999999e-36  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_011757  Mchl_0779  methyl-accepting chemotaxis sensory transducer with Cache sensor  45.5 
 
 
558 aa  152  8.999999999999999e-36  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.0546434  normal  0.151916 
 
 
-
 
NC_009485  BBta_1536  methyl-accepting chemotaxis protein  45.95 
 
 
716 aa  152  8.999999999999999e-36  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.566253  normal  0.284447 
 
 
-
 
NC_009485  BBta_6635  methyl-accepting chemotaxis protein  40.27 
 
 
565 aa  152  8.999999999999999e-36  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.459746  normal  0.104137 
 
 
-
 
NC_011004  Rpal_3598  methyl-accepting chemotaxis sensory transducer  40.36 
 
 
672 aa  152  1e-35  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_009485  BBta_2367  putative methyl-accepting chemotaxis receptor/sensory transducer precursor  40.81 
 
 
562 aa  152  1e-35  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.287749 
 
 
-
 
NC_009485  BBta_2901  methyl-accepting chemotaxis sensory transducer  40 
 
 
674 aa  152  1e-35  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.14772  normal  0.22504 
 
 
-
 
NC_010172  Mext_0820  chemotaxis sensory transducer  40.44 
 
 
608 aa  152  1e-35  Methylobacterium extorquens PA1  Bacteria  normal  0.254614  normal  0.216431 
 
 
-
 
NC_007778  RPB_4286  methyl-accepting chemotaxis sensory transducer  38.04 
 
 
563 aa  151  2e-35  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_007958  RPD_3547  chemotaxis sensory transducer  39.31 
 
 
566 aa  151  2e-35  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_007778  RPB_4280  methyl-accepting chemotaxis sensory transducer  44.93 
 
 
563 aa  151  3e-35  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_009485  BBta_1388  methyl-accepting chemotaxis sensory transducer  40.73 
 
 
656 aa  150  4e-35  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.0527529  normal  0.207734 
 
 
-
 
NC_007958  RPD_0995  chemotaxis sensory transducer  40.22 
 
 
656 aa  150  4e-35  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.880627  normal 
 
 
-
 
NC_007958  RPD_1025  methyl-accepting chemotaxis sensory transducer  38.57 
 
 
681 aa  150  4e-35  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_007958  RPD_3904  chemotaxis sensory transducer  38.89 
 
 
566 aa  150  4e-35  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_007958  RPD_0497  chemotaxis sensory transducer  39.6 
 
 
577 aa  149  7e-35  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_011004  Rpal_1830  methyl-accepting chemotaxis sensory transducer  37.86 
 
 
563 aa  149  1.0000000000000001e-34  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_011004  Rpal_2757  methyl-accepting chemotaxis sensory transducer  39.19 
 
 
561 aa  149  1.0000000000000001e-34  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.0630329  n/a   
 
 
-
 
NC_007925  RPC_4406  methyl-accepting chemotaxis sensory transducer  41.09 
 
 
566 aa  149  1.0000000000000001e-34  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.341232 
 
 
-
 
NC_007958  RPD_0994  chemotaxis sensory transducer  39.1 
 
 
656 aa  149  1.0000000000000001e-34  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.357708  normal 
 
 
-
 
NC_009485  BBta_7508  putative methyl-accepting chemotaxis protein (with a HAMP region)  45.37 
 
 
552 aa  149  1.0000000000000001e-34  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.692825  normal 
 
 
-
 
NC_011004  Rpal_5144  methyl-accepting chemotaxis sensory transducer  37.86 
 
 
686 aa  148  2.0000000000000003e-34  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_009485  BBta_2903  methyl-accepting chemotaxis sensory transducer  40.48 
 
 
568 aa  148  2.0000000000000003e-34  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.335645  normal  0.0996392 
 
 
-
 
NC_009485  BBta_2907  putative methyl-accepting chemotaxis protein  44.49 
 
 
556 aa  147  3e-34  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.835875  normal  0.0729634 
 
 
-
 
NC_011004  Rpal_4783  methyl-accepting chemotaxis sensory transducer  40.58 
 
 
730 aa  147  4.0000000000000006e-34  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_011004  Rpal_2025  methyl-accepting chemotaxis sensory transducer  39.27 
 
 
688 aa  147  4.0000000000000006e-34  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.0110809  n/a   
 
 
-
 
NC_007925  RPC_3379  methyl-accepting chemotaxis sensory transducer  45.05 
 
 
587 aa  147  4.0000000000000006e-34  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.787169  normal 
 
 
-
 
NC_007958  RPD_1857  chemotaxis sensory transducer  40 
 
 
563 aa  147  4.0000000000000006e-34  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_007925  RPC_4407  methyl-accepting chemotaxis sensory transducer  40.36 
 
 
566 aa  147  5e-34  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.365939 
 
 
-
 
NC_007925  RPC_2149  methyl-accepting chemotaxis sensory transducer  40.58 
 
 
675 aa  146  6e-34  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.0391093 
 
 
-
 
NC_007925  RPC_3161  methyl-accepting chemotaxis sensory transducer  38.91 
 
 
731 aa  146  6e-34  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.072786  normal 
 
 
-
 
NC_007778  RPB_2250  methyl-accepting chemotaxis sensory transducer  37.84 
 
 
670 aa  146  7.0000000000000006e-34  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_013173  Dbac_1209  methyl-accepting chemotaxis sensory transducer  36.82 
 
 
560 aa  146  9e-34  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.0163835  n/a   
 
 
-
 
NC_011004  Rpal_4271  methyl-accepting chemotaxis sensory transducer  38.97 
 
 
567 aa  145  1e-33  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_007778  RPB_3610  methyl-accepting chemotaxis sensory transducer  44.05 
 
 
563 aa  145  1e-33  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.735593  normal  0.400148 
 
 
-
 
NC_007925  RPC_3380  methyl-accepting chemotaxis sensory transducer  39.64 
 
 
567 aa  145  1e-33  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.689596 
 
 
-
 
NC_007958  RPD_0065  chemotaxis sensory transducer  39.38 
 
 
688 aa  145  1e-33  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal  0.0714339 
 
 
-
 
NC_007958  RPD_1918  chemotaxis sensory transducer  39.78 
 
 
688 aa  145  1e-33  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal  0.537222 
 
 
-
 
NC_009485  BBta_2900  putative methyl-accepting chemotaxis receptor/sensory transducer (chemoreceptor)  41.81 
 
 
675 aa  144  2e-33  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.142675  normal  0.173139 
 
 
-
 
NC_007964  Nham_1045  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  36 
 
 
564 aa  144  2e-33  Nitrobacter hamburgensis X14  Bacteria  normal  n/a   
 
 
-
 
NC_007778  RPB_1716  methyl-accepting chemotaxis sensory transducer  40.43 
 
 
564 aa  144  2e-33  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.0822312  normal  0.62395 
 
 
-
 
NC_007958  RPD_0336  chemotaxis sensory transducer  44.59 
 
 
563 aa  144  2e-33  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_009485  BBta_0865  methyl-accepting chemotaxis sensory transducer  38.38 
 
 
712 aa  145  2e-33  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.163995 
 
 
-
 
NC_007406  Nwi_0530  methyl-accepting chemotaxis protein  36.3 
 
 
569 aa  144  3e-33  Nitrobacter winogradskyi Nb-255  Bacteria  normal  0.667624  normal 
 
 
-
 
NC_009485  BBta_4464  methyl-accepting chemotaxis sensory transducer  39.27 
 
 
573 aa  144  3e-33  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.610641  normal  0.757777 
 
 
-
 
NC_011004  Rpal_5172  methyl-accepting chemotaxis sensory transducer  40 
 
 
656 aa  144  3e-33  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_009485  BBta_2905  putative methyl-accepting chemotaxis protein  38.91 
 
 
542 aa  144  3e-33  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.234112  normal  0.211145 
 
 
-
 
NC_011894  Mnod_5243  methyl-accepting chemotaxis sensory transducer  48.7 
 
 
562 aa  144  3e-33  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_007958  RPD_2465  chemotaxis sensory transducer  39.27 
 
 
561 aa  144  3e-33  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.5909  normal  0.697276 
 
 
-
 
NC_009485  BBta_2908  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  39.64 
 
 
561 aa  144  4e-33  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.07018 
 
 
-
 
NC_011004  Rpal_5120  methyl-accepting chemotaxis sensory transducer  38.6 
 
 
563 aa  144  4e-33  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_009485  BBta_2906  putative methyl-accepting chemotaxis protein  43.61 
 
 
564 aa  143  6e-33  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.430156  normal  0.106702 
 
 
-
 
NC_007958  RPD_3581  methyl-accepting chemotaxis sensory transducer  38.6 
 
 
567 aa  143  6e-33  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.0981346  normal  0.985512 
 
 
-
 
NC_007778  RPB_0192  methyl-accepting chemotaxis sensory transducer  39.07 
 
 
688 aa  143  7e-33  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_007925  RPC_3804  methyl-accepting chemotaxis sensory transducer  43.17 
 
 
655 aa  143  7e-33  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.772812  normal 
 
 
-
 
NC_007925  RPC_4527  methyl-accepting chemotaxis sensory transducer  37.68 
 
 
667 aa  143  7e-33  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.527831 
 
 
-
 
NC_009485  BBta_4269  putative methyl-accepting chemotaxis receptor/sensory transducer protein  39.34 
 
 
691 aa  142  8e-33  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.35374 
 
 
-
 
NC_009485  BBta_0575  methyl-accepting chemotaxis sensory transducer  36.23 
 
 
681 aa  142  8e-33  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_007925  RPC_3378  methyl-accepting chemotaxis sensory transducer  44.05 
 
 
563 aa  143  8e-33  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.104618  normal 
 
 
-
 
NC_007778  RPB_2983  methyl-accepting chemotaxis sensory transducer  38.23 
 
 
561 aa  142  9e-33  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal  0.0323515 
 
 
-
 
NC_009485  BBta_6993  putative methyl-accepting chemotaxis receptor/sensory transducer  36.84 
 
 
697 aa  142  9e-33  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_007964  Nham_1080  methyl-accepting chemotaxis sensory transducer  37.82 
 
 
698 aa  142  9.999999999999999e-33  Nitrobacter hamburgensis X14  Bacteria  normal  0.0139762  n/a   
 
 
-
 
NC_010172  Mext_3147  chemotaxis sensory transducer  39.24 
 
 
561 aa  142  9.999999999999999e-33  Methylobacterium extorquens PA1  Bacteria  normal  0.0908078  normal 
 
 
-
 
NC_009485  BBta_0885  putative methyl-accepting chemotaxis protein  44.93 
 
 
691 aa  142  9.999999999999999e-33  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.493714  normal 
 
 
-
 
NC_007958  RPD_0337  chemotaxis sensory transducer  38.57 
 
 
563 aa  142  9.999999999999999e-33  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.760858  normal  0.789667 
 
 
-
 
NC_011757  Mchl_3471  methyl-accepting chemotaxis sensory transducer  39.24 
 
 
561 aa  142  1.9999999999999998e-32  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.130295  normal 
 
 
-
 
NC_009485  BBta_2799  putative receptor/sensory transducer  40.29 
 
 
707 aa  141  1.9999999999999998e-32  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.0655652  normal 
 
 
-
 
NC_007643  Rru_A2076  chemotaxis sensory transducer  38.72 
 
 
561 aa  141  1.9999999999999998e-32  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.723039  n/a   
 
 
-
 
NC_007778  RPB_1321  methyl-accepting chemotaxis sensory transducer  38.18 
 
 
730 aa  142  1.9999999999999998e-32  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.0177086  normal  0.260794 
 
 
-
 
NC_007778  RPB_3545  methyl-accepting chemotaxis sensory transducer  38.71 
 
 
689 aa  141  1.9999999999999998e-32  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.457552  normal  0.598514 
 
 
-
 
NC_010505  Mrad2831_1766  methyl-accepting chemotaxis sensory transducer  39.86 
 
 
575 aa  141  1.9999999999999998e-32  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_007643  Rru_A2078  chemotaxis sensory transducer  38.4 
 
 
561 aa  140  3e-32  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.960991  n/a   
 
 
-
 
NC_007778  RPB_0489  methyl-accepting chemotaxis sensory transducer  43.69 
 
 
564 aa  141  3e-32  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.301128  normal 
 
 
-
 
NC_007925  RPC_1843  methyl-accepting chemotaxis sensory transducer  37.82 
 
 
568 aa  141  3e-32  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.618754 
 
 
-
 
NC_007925  RPC_2846  methyl-accepting chemotaxis sensory transducer  36.5 
 
 
565 aa  141  3e-32  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.430745  normal 
 
 
-
 
NC_010505  Mrad2831_3824  methyl-accepting chemotaxis sensory transducer  41.67 
 
 
561 aa  141  3e-32  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_007925  RPC_4101  methyl-accepting chemotaxis sensory transducer  38.71 
 
 
698 aa  140  3.9999999999999997e-32  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal 
 
 
-
 
NC_011004  Rpal_4118  methyl-accepting chemotaxis sensory transducer  38.44 
 
 
567 aa  140  4.999999999999999e-32  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_007925  RPC_2744  methyl-accepting chemotaxis sensory transducer  38.18 
 
 
572 aa  140  4.999999999999999e-32  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.696609  normal  0.585687 
 
 
-
 
NC_007925  RPC_2742  methyl-accepting chemotaxis sensory transducer  43.17 
 
 
560 aa  139  1e-31  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.429688 
 
 
-
 
NC_010725  Mpop_3344  methyl-accepting chemotaxis sensory transducer  39.58 
 
 
561 aa  139  1e-31  Methylobacterium populi BJ001  Bacteria  normal  0.828703  normal 
 
 
-
 
NC_007925  RPC_4809  methyl-accepting chemotaxis sensory transducer  44.72 
 
 
563 aa  139  1e-31  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal 
 
 
-
 
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