More than 300 homologs were found in PanDaTox collection
for query gene Rru_A3241 on replicon NC_007643
Organism: Rhodospirillum rubrum ATCC 11170



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007643  Rru_A3241  chemotaxis sensory transducer  100 
 
 
445 aa  875    Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.768967  n/a   
 
 
-
 
NC_007643  Rru_A0120  chemotaxis sensory transducer  46.24 
 
 
445 aa  364  2e-99  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.118781  n/a   
 
 
-
 
NC_009485  BBta_4739  methyl-accepting chemotaxis sensory transducer  40.81 
 
 
450 aa  285  1.0000000000000001e-75  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_007925  RPC_3161  methyl-accepting chemotaxis sensory transducer  53.62 
 
 
731 aa  257  3e-67  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.072786  normal 
 
 
-
 
NC_007925  RPC_1710  methyl-accepting chemotaxis sensory transducer  37.73 
 
 
449 aa  247  3e-64  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.140977  normal  0.0321459 
 
 
-
 
NC_007958  RPD_1918  chemotaxis sensory transducer  52.16 
 
 
688 aa  245  9e-64  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal  0.537222 
 
 
-
 
NC_009485  BBta_2901  methyl-accepting chemotaxis sensory transducer  50.9 
 
 
674 aa  244  1.9999999999999999e-63  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.14772  normal  0.22504 
 
 
-
 
NC_011004  Rpal_5119  methyl-accepting chemotaxis sensory transducer  52.79 
 
 
563 aa  243  6e-63  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_007643  Rru_A1408  chemotaxis sensory transducer  55.43 
 
 
568 aa  243  6e-63  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.591131  n/a   
 
 
-
 
NC_007958  RPD_1025  methyl-accepting chemotaxis sensory transducer  52.94 
 
 
681 aa  243  7e-63  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_009485  BBta_0969  methyl-accepting chemotaxis sensory transducer  50.74 
 
 
562 aa  241  1e-62  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.956339  normal  0.570918 
 
 
-
 
NC_007925  RPC_4527  methyl-accepting chemotaxis sensory transducer  53.26 
 
 
667 aa  242  1e-62  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.527831 
 
 
-
 
NC_007958  RPD_0065  chemotaxis sensory transducer  51.08 
 
 
688 aa  241  1e-62  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal  0.0714339 
 
 
-
 
NC_007778  RPB_2250  methyl-accepting chemotaxis sensory transducer  51.82 
 
 
670 aa  240  4e-62  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_007778  RPB_2358  methyl-accepting chemotaxis sensory transducer  51.47 
 
 
673 aa  240  4e-62  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal  0.207811 
 
 
-
 
NC_007925  RPC_2846  methyl-accepting chemotaxis sensory transducer  52.57 
 
 
565 aa  239  5.999999999999999e-62  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.430745  normal 
 
 
-
 
NC_009485  BBta_7508  putative methyl-accepting chemotaxis protein (with a HAMP region)  50.54 
 
 
552 aa  239  6.999999999999999e-62  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.692825  normal 
 
 
-
 
NC_007778  RPB_0192  methyl-accepting chemotaxis sensory transducer  51.08 
 
 
688 aa  239  6.999999999999999e-62  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_007925  RPC_2742  methyl-accepting chemotaxis sensory transducer  52.71 
 
 
560 aa  239  1e-61  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.429688 
 
 
-
 
NC_011004  Rpal_2025  methyl-accepting chemotaxis sensory transducer  50.18 
 
 
688 aa  238  2e-61  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.0110809  n/a   
 
 
-
 
NC_007778  RPB_3545  methyl-accepting chemotaxis sensory transducer  51.8 
 
 
689 aa  237  2e-61  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.457552  normal  0.598514 
 
 
-
 
NC_007925  RPC_3379  methyl-accepting chemotaxis sensory transducer  52.71 
 
 
587 aa  238  2e-61  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.787169  normal 
 
 
-
 
NC_011004  Rpal_3598  methyl-accepting chemotaxis sensory transducer  50.9 
 
 
672 aa  237  4e-61  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_007925  RPC_2149  methyl-accepting chemotaxis sensory transducer  50.9 
 
 
675 aa  236  7e-61  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.0391093 
 
 
-
 
NC_009485  BBta_4464  methyl-accepting chemotaxis sensory transducer  50.73 
 
 
573 aa  236  8e-61  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.610641  normal  0.757777 
 
 
-
 
NC_007925  RPC_4407  methyl-accepting chemotaxis sensory transducer  49.64 
 
 
566 aa  236  8e-61  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.365939 
 
 
-
 
NC_011004  Rpal_2142  methyl-accepting chemotaxis sensory transducer  42.15 
 
 
428 aa  236  9e-61  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.293169  n/a   
 
 
-
 
NC_007643  Rru_A1802  chemotaxis sensory transducer  52.55 
 
 
438 aa  234  2.0000000000000002e-60  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_009485  BBta_4269  putative methyl-accepting chemotaxis receptor/sensory transducer protein  51.67 
 
 
691 aa  235  2.0000000000000002e-60  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.35374 
 
 
-
 
NC_007925  RPC_3377  methyl-accepting chemotaxis sensory transducer  50.93 
 
 
563 aa  234  2.0000000000000002e-60  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.528008  normal 
 
 
-
 
NC_011004  Rpal_1830  methyl-accepting chemotaxis sensory transducer  51.67 
 
 
563 aa  234  3e-60  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_007778  RPB_4286  methyl-accepting chemotaxis sensory transducer  52.04 
 
 
563 aa  233  4.0000000000000004e-60  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_007958  RPD_3107  chemotaxis sensory transducer  50.37 
 
 
674 aa  233  4.0000000000000004e-60  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal  0.0664997 
 
 
-
 
NC_011004  Rpal_2757  methyl-accepting chemotaxis sensory transducer  49.46 
 
 
561 aa  233  5e-60  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.0630329  n/a   
 
 
-
 
NC_007925  RPC_4101  methyl-accepting chemotaxis sensory transducer  51.03 
 
 
698 aa  233  5e-60  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal 
 
 
-
 
NC_007643  Rru_A1293  methyl-accepting chemotaxis sensory transducer  54.65 
 
 
562 aa  233  6e-60  Rhodospirillum rubrum ATCC 11170  Bacteria  decreased coverage  0.00511002  n/a   
 
 
-
 
NC_007778  RPB_1321  methyl-accepting chemotaxis sensory transducer  50.36 
 
 
730 aa  231  1e-59  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.0177086  normal  0.260794 
 
 
-
 
NC_007925  RPC_3378  methyl-accepting chemotaxis sensory transducer  52.42 
 
 
563 aa  231  1e-59  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.104618  normal 
 
 
-
 
NC_007925  RPC_3804  methyl-accepting chemotaxis sensory transducer  50.9 
 
 
655 aa  232  1e-59  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.772812  normal 
 
 
-
 
NC_009485  BBta_2368  putative methyl-accepting chemotaxis receptor/sensory transducer precursor  50.72 
 
 
561 aa  232  1e-59  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.280114 
 
 
-
 
NC_009485  BBta_2904  putative methyl-accepting chemotaxis protein  49.28 
 
 
568 aa  232  1e-59  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.481458  normal  0.283558 
 
 
-
 
NC_011004  Rpal_1871  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  49.26 
 
 
716 aa  231  2e-59  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_009485  BBta_0330  putative methyl-accepting chemotaxis receptor/sensory transducer  51.44 
 
 
676 aa  231  2e-59  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.0869057 
 
 
-
 
NC_007958  RPD_0994  chemotaxis sensory transducer  48.74 
 
 
656 aa  231  2e-59  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.357708  normal 
 
 
-
 
NC_007958  RPD_3547  chemotaxis sensory transducer  51.08 
 
 
566 aa  231  2e-59  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_009485  BBta_6717  methyl-accepting chemotaxis sensory transducer  50.36 
 
 
741 aa  230  3e-59  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.447835  normal  0.587139 
 
 
-
 
NC_007925  RPC_4580  methyl-accepting chemotaxis sensory transducer  50.93 
 
 
563 aa  231  3e-59  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.174371  normal 
 
 
-
 
NC_009485  BBta_0575  methyl-accepting chemotaxis sensory transducer  49.82 
 
 
681 aa  231  3e-59  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_007958  RPD_0995  chemotaxis sensory transducer  48.74 
 
 
656 aa  230  5e-59  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.880627  normal 
 
 
-
 
NC_009485  BBta_6483  methyl-accepting chemotaxis protein  50 
 
 
565 aa  229  6e-59  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.877741  normal 
 
 
-
 
NC_007925  RPC_4406  methyl-accepting chemotaxis sensory transducer  48.92 
 
 
566 aa  229  1e-58  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.341232 
 
 
-
 
NC_009485  BBta_2907  putative methyl-accepting chemotaxis protein  50.9 
 
 
556 aa  228  2e-58  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.835875  normal  0.0729634 
 
 
-
 
NC_011004  Rpal_4118  methyl-accepting chemotaxis sensory transducer  50.9 
 
 
567 aa  228  2e-58  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_011004  Rpal_5172  methyl-accepting chemotaxis sensory transducer  49.44 
 
 
656 aa  228  2e-58  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_007778  RPB_2983  methyl-accepting chemotaxis sensory transducer  49.82 
 
 
561 aa  228  2e-58  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal  0.0323515 
 
 
-
 
NC_009485  BBta_2905  putative methyl-accepting chemotaxis protein  49.81 
 
 
542 aa  228  2e-58  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.234112  normal  0.211145 
 
 
-
 
NC_007958  RPD_2465  chemotaxis sensory transducer  49.82 
 
 
561 aa  227  3e-58  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.5909  normal  0.697276 
 
 
-
 
NC_007925  RPC_0061  methyl-accepting chemotaxis sensory transducer  50.72 
 
 
674 aa  226  4e-58  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal 
 
 
-
 
NC_007925  RPC_1795  methyl-accepting chemotaxis sensory transducer  48.91 
 
 
561 aa  227  4e-58  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.432423  normal  0.0230577 
 
 
-
 
NC_007925  RPC_3380  methyl-accepting chemotaxis sensory transducer  48.56 
 
 
567 aa  226  4e-58  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.689596 
 
 
-
 
NC_011004  Rpal_4787  methyl-accepting chemotaxis sensory transducer  52.94 
 
 
561 aa  227  4e-58  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.708956  n/a   
 
 
-
 
NC_011004  Rpal_5120  methyl-accepting chemotaxis sensory transducer  49.81 
 
 
563 aa  226  6e-58  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_007958  RPD_1867  chemotaxis sensory transducer  49.46 
 
 
714 aa  226  6e-58  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal  0.133032 
 
 
-
 
NC_009485  BBta_2900  putative methyl-accepting chemotaxis receptor/sensory transducer (chemoreceptor)  50.35 
 
 
675 aa  226  9e-58  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.142675  normal  0.173139 
 
 
-
 
NC_007643  Rru_A2484  chemotaxis sensory transducer  52.42 
 
 
563 aa  225  1e-57  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.1562  n/a   
 
 
-
 
NC_010172  Mext_3147  chemotaxis sensory transducer  46.29 
 
 
561 aa  225  1e-57  Methylobacterium extorquens PA1  Bacteria  normal  0.0908078  normal 
 
 
-
 
NC_009485  BBta_2903  methyl-accepting chemotaxis sensory transducer  49.64 
 
 
568 aa  225  1e-57  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.335645  normal  0.0996392 
 
 
-
 
NC_007925  RPC_4147  methyl-accepting chemotaxis sensory transducer  50.37 
 
 
694 aa  225  1e-57  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal 
 
 
-
 
NC_011004  Rpal_5144  methyl-accepting chemotaxis sensory transducer  51.43 
 
 
686 aa  225  1e-57  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_011757  Mchl_0679  methyl-accepting chemotaxis sensory transducer  53.31 
 
 
565 aa  224  2e-57  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal  0.0248904 
 
 
-
 
NC_011004  Rpal_4783  methyl-accepting chemotaxis sensory transducer  49.46 
 
 
730 aa  225  2e-57  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_007778  RPB_0914  methyl-accepting chemotaxis sensory transducer  51.07 
 
 
689 aa  225  2e-57  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal  0.497103 
 
 
-
 
NC_010172  Mext_0667  chemotaxis sensory transducer  53.31 
 
 
565 aa  225  2e-57  Methylobacterium extorquens PA1  Bacteria  normal  0.510632  normal  0.195802 
 
 
-
 
NC_007778  RPB_4280  methyl-accepting chemotaxis sensory transducer  51.09 
 
 
563 aa  224  2e-57  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_011757  Mchl_3471  methyl-accepting chemotaxis sensory transducer  46.29 
 
 
561 aa  224  2e-57  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.130295  normal 
 
 
-
 
NC_011757  Mchl_3907  methyl-accepting chemotaxis sensory transducer  52.08 
 
 
565 aa  224  3e-57  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal 
 
 
-
 
NC_009485  BBta_2906  putative methyl-accepting chemotaxis protein  50.72 
 
 
564 aa  223  4e-57  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.430156  normal  0.106702 
 
 
-
 
NC_009485  BBta_1840  methyl-accepting chemotaxis sensory transducer  46.18 
 
 
561 aa  223  4.9999999999999996e-57  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.745103 
 
 
-
 
NC_007925  RPC_1843  methyl-accepting chemotaxis sensory transducer  47.65 
 
 
568 aa  223  6e-57  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.618754 
 
 
-
 
NC_009485  BBta_5110  hypothetical protein  51.3 
 
 
688 aa  223  7e-57  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.791751 
 
 
-
 
NC_007643  Rru_A3563  chemotaxis sensory transducer  49.81 
 
 
563 aa  223  8e-57  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_009485  BBta_2908  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  48.31 
 
 
561 aa  223  8e-57  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.07018 
 
 
-
 
NC_009485  BBta_2902  methyl-accepting chemotaxis sensory transducer  51.6 
 
 
563 aa  222  9.999999999999999e-57  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.32606  normal  0.0943242 
 
 
-
 
NC_010505  Mrad2831_2241  methyl-accepting chemotaxis sensory transducer  52.21 
 
 
566 aa  221  9.999999999999999e-57  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_009485  BBta_6635  methyl-accepting chemotaxis protein  48.9 
 
 
565 aa  222  9.999999999999999e-57  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.459746  normal  0.104137 
 
 
-
 
NC_009485  BBta_2367  putative methyl-accepting chemotaxis receptor/sensory transducer precursor  48.75 
 
 
562 aa  222  9.999999999999999e-57  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.287749 
 
 
-
 
NC_007964  Nham_0772  methyl-accepting chemotaxis sensory transducer  50.36 
 
 
561 aa  222  9.999999999999999e-57  Nitrobacter hamburgensis X14  Bacteria  normal  n/a   
 
 
-
 
NC_007958  RPD_3904  chemotaxis sensory transducer  52.79 
 
 
566 aa  222  9.999999999999999e-57  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_009485  BBta_7375  methyl-accepting chemotaxis sensory transducer  52.31 
 
 
655 aa  221  9.999999999999999e-57  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_010172  Mext_3616  chemotaxis sensory transducer  52.08 
 
 
305 aa  221  1.9999999999999999e-56  Methylobacterium extorquens PA1  Bacteria  normal  0.460138  normal 
 
 
-
 
NC_011757  Mchl_2346  methyl-accepting chemotaxis sensory transducer  47.55 
 
 
556 aa  220  3.9999999999999997e-56  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal  0.395485 
 
 
-
 
NC_009485  BBta_0885  putative methyl-accepting chemotaxis protein  49.07 
 
 
691 aa  220  3.9999999999999997e-56  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.493714  normal 
 
 
-
 
NC_007778  RPB_4561  methyl-accepting chemotaxis sensory transducer  49.82 
 
 
711 aa  220  3.9999999999999997e-56  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_007925  RPC_2744  methyl-accepting chemotaxis sensory transducer  48.38 
 
 
572 aa  220  3.9999999999999997e-56  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.696609  normal  0.585687 
 
 
-
 
NC_010172  Mext_2072  chemotaxis sensory transducer  47.55 
 
 
556 aa  219  5e-56  Methylobacterium extorquens PA1  Bacteria  normal  0.68132  normal  0.341201 
 
 
-
 
NC_011004  Rpal_4941  methyl-accepting chemotaxis sensory transducer  50.55 
 
 
563 aa  219  6e-56  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.396774  n/a   
 
 
-
 
NC_009485  BBta_1388  methyl-accepting chemotaxis sensory transducer  50.74 
 
 
656 aa  219  6e-56  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.0527529  normal  0.207734 
 
 
-
 
NC_011757  Mchl_1427  methyl-accepting chemotaxis sensory transducer  51.55 
 
 
562 aa  219  6e-56  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.309452  normal 
 
 
-
 
NC_007958  RPD_0153  chemotaxis sensory transducer  50.9 
 
 
602 aa  219  6e-56  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_011004  Rpal_0924  methyl-accepting chemotaxis sensory transducer  51.3 
 
 
712 aa  219  7.999999999999999e-56  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.991242  n/a   
 
 
-
 
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