| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_0924 |
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| Symbol | |
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| ID | 6408578 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 982953 |
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| End bp | 985091 |
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| Gene Length | 2139 bp |
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| Protein Length | 712 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642710838 |
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| Product | methyl-accepting chemotaxis sensory transducer |
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| Protein accession | YP_001989957 |
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| Protein GI | 192289352 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.991242 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTGGGA AATTCGCGAA ATTCCGACGT CTGCGGCTGA AATTTCCGCA ACTCGGAATT
CGTGGCAGCC TGTTCGCTGC GTTCACGGTG ATCGCCGGCA TGGCAATCCT GATCAGCGCG
TGGGCCGGAA TCAGCCTGCA TCAGCTTGGG CGCACGATCG CCGAACTGAG CGGCCGCGAC
ATTCCCAAAC TCGCTGCCAG CCTCCAGCTC GCCACCGAAA GCGAAAGTCT CGCCAGCCAG
GCACCGATCC TTCTCGACTC GCTCTCCGCC GAACAACTCC GTGAGCGCTC AGCCCGGATG
AAGGCGGCGC AGCAGGTCGC GATCCAGAAA CTCGCCGACA TCACCACCTA TGGCGGCGAC
AAGGCAGTCG TTTCGGCGCT GAGCGAAACC CTGAAGAATA TCGACGACAC CATCCGCAGC
CTCGGCGCAG CCGCCAAGGA GCGGCTCGAT CTGACCACGC AGCACGCCAA ACTGTACGAA
GAGTTGCGCC GCTCGCACGA CGCCTTCATT GCAGTTGCCA ACCCGGCGAT GCTTGATGCG
CAGACTCAGA TGAATGCCGT GCTCGGTTCG GCCAATCTGT CGCAGGACGA CGCCACAGCG
ACCGGACGCC AGATCGAACA GCTCGGCAAC GTCATCGCCC AGAGCAATCT GATCGCCTCG
AACCTGATGG CGGCTCTTTC GGCCTCCAGC GCCGATGACC TGGAGCCGGT TGAAGCCAGC
TTCAAGGAAG CCCGTCAGGT GGTGAACACC AATCTCGACG GCCTCCCGCA GAACCAGACC
ACCGCCAACA TCAAGACCGC AGCGCAGAAG CTGATGGCGC TCGGCGACGG CAAGACCGGC
GCATTCAAGC TGCGCCAGCT CGAACTCGAT GCCCGCGACT ATCGCGATCT GCTGCTCGAC
GAGACCCGCA AGCTCAACGT CGGCCTCGGC ATCAGCGTCA AGCAGCTCGT CGACAACGTC
CGCAACGAGA CGACGGTCGG CACCTCGGAC GCGCAGGCGC AAATCACGCT GGCCACGCGG
GTGATGATCG GGCTCGGCGC GGCGACCCTG ATCGGCTCGG CGCTGTTCGT CTGGCTGTAT
GTCGGCCGCA GCATCCTGCG CCGGATTGGC GGCCTGCAGA AGTCGATGCA GAGCCTGTCG
GCCGGCGACC TCAGCACCGC CATCGAGCGC GGCAGCCGCC GCGACGAAAT CGCCGTGATG
GCCGAGTCGC TGGAAGTGTT CCGCGACAAC ATGATCCGGG CCCGGACGTT GAGCGAGGAG
CAGGACAAGG ATCGGGCCGC CAAGGCCGAG CGGACCCAGC GGATCGAGGC TCGGATCGCC
GAATTCGAGG CGACCGTGCG CAGTGCAATG GAGAAGCTGC AATCCTCCGC CGACCAGATG
CAGGAAACCG CGCACACAAT GGCGACCACC TCCGAACAGT CGAGCGCGCT GGTCACCACC
GTCGCGTCGG CTGCGGAAGA AACCTCGGTC AACGTTCAGA CCGTGGCAAC CGGCACCGAG
CAACTCGCCT CGTCGATCGC CGAGATCAGC CGTCAGGTCA CCACCTCGGC GGAGATCGCG
ACCCGCGCCG TGCGCGAAGC GGGCGAGACC GACACCACCA TGCAGGGCCT CGCCGATAAC
GCCGAGCGGA TCAGCGCGGT GATCGACCTG ATCCAGAGCA TCGCATCCCA GACCAACCTG
CTGGCGCTCA ATGCCACGAT CGAGGCGGCG CGTGCCGGTG ACGCCGGCCG CGGCTTCGCG
GTGGTGGCCG CCGAGGTCAA GGATCTCGCC AGCCAGACCG CCAAGGCGAC CGAGGAGATC
CGGGCGCAGA TCGCCGCGAT GCAGGGGGTG ACCAGTTCGG CCGTTGGCGC GATCCGCAAT
ATCGGCCAGA CCATTACTTC GATCAACGAG GTGACCACCG CCATCACCGC CGCCGTCGAA
GAACAGGGCG CGGCGACCCG CGAGATCGCC CGCAACATCC AGCATGCAGC CGGCGGCACC
AGCGAAGTCT CCAGTAACAT CGTCGGCGTC AGCGCCGCCG CCTCACAGGC CGGCTCCGCT
GCAGCCGAGG TGCTGAACGC CTCCGGCTCG CTGCGCCAGG AAGCGGCGCT GCTGCGCGAG
GAGATCGACG CGTTCCTGAC CAATATCCGC GCCGCCTGA
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| Protein sequence | MSGKFAKFRR LRLKFPQLGI RGSLFAAFTV IAGMAILISA WAGISLHQLG RTIAELSGRD
IPKLAASLQL ATESESLASQ APILLDSLSA EQLRERSARM KAAQQVAIQK LADITTYGGD
KAVVSALSET LKNIDDTIRS LGAAAKERLD LTTQHAKLYE ELRRSHDAFI AVANPAMLDA
QTQMNAVLGS ANLSQDDATA TGRQIEQLGN VIAQSNLIAS NLMAALSASS ADDLEPVEAS
FKEARQVVNT NLDGLPQNQT TANIKTAAQK LMALGDGKTG AFKLRQLELD ARDYRDLLLD
ETRKLNVGLG ISVKQLVDNV RNETTVGTSD AQAQITLATR VMIGLGAATL IGSALFVWLY
VGRSILRRIG GLQKSMQSLS AGDLSTAIER GSRRDEIAVM AESLEVFRDN MIRARTLSEE
QDKDRAAKAE RTQRIEARIA EFEATVRSAM EKLQSSADQM QETAHTMATT SEQSSALVTT
VASAAEETSV NVQTVATGTE QLASSIAEIS RQVTTSAEIA TRAVREAGET DTTMQGLADN
AERISAVIDL IQSIASQTNL LALNATIEAA RAGDAGRGFA VVAAEVKDLA SQTAKATEEI
RAQIAAMQGV TSSAVGAIRN IGQTITSINE VTTAITAAVE EQGAATREIA RNIQHAAGGT
SEVSSNIVGV SAAASQAGSA AAEVLNASGS LRQEAALLRE EIDAFLTNIR AA
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