More than 300 homologs were found in PanDaTox collection
for query gene BBta_0865 on replicon NC_009485
Organism: Bradyrhizobium sp. BTAi1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011004  Rpal_0924  methyl-accepting chemotaxis sensory transducer  61.54 
 
 
712 aa  799    Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.991242  n/a   
 
 
-
 
NC_009485  BBta_0865  methyl-accepting chemotaxis sensory transducer  100 
 
 
712 aa  1392    Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.163995 
 
 
-
 
NC_007778  RPB_4561  methyl-accepting chemotaxis sensory transducer  61.55 
 
 
711 aa  794    Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_007958  RPD_0840  chemotaxis sensory transducer  60.25 
 
 
712 aa  805    Rhodopseudomonas palustris BisB5  Bacteria  normal  normal  0.174635 
 
 
-
 
NC_007778  RPB_3545  methyl-accepting chemotaxis sensory transducer  49.45 
 
 
689 aa  298  2e-79  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.457552  normal  0.598514 
 
 
-
 
NC_007925  RPC_4147  methyl-accepting chemotaxis sensory transducer  51.15 
 
 
694 aa  296  7e-79  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal 
 
 
-
 
NC_007958  RPD_0065  chemotaxis sensory transducer  45.41 
 
 
688 aa  296  1e-78  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal  0.0714339 
 
 
-
 
NC_007958  RPD_1918  chemotaxis sensory transducer  48.5 
 
 
688 aa  295  2e-78  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal  0.537222 
 
 
-
 
NC_007958  RPD_3904  chemotaxis sensory transducer  47.98 
 
 
566 aa  293  7e-78  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_011004  Rpal_5119  methyl-accepting chemotaxis sensory transducer  44.81 
 
 
563 aa  291  3e-77  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_009485  BBta_2368  putative methyl-accepting chemotaxis receptor/sensory transducer precursor  46.92 
 
 
561 aa  288  2.9999999999999996e-76  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.280114 
 
 
-
 
NC_011004  Rpal_2025  methyl-accepting chemotaxis sensory transducer  46.17 
 
 
688 aa  288  2.9999999999999996e-76  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.0110809  n/a   
 
 
-
 
NC_007778  RPB_0192  methyl-accepting chemotaxis sensory transducer  46.87 
 
 
688 aa  288  2.9999999999999996e-76  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_007643  Rru_A2484  chemotaxis sensory transducer  46.77 
 
 
563 aa  286  5.999999999999999e-76  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.1562  n/a   
 
 
-
 
NC_007958  RPD_3547  chemotaxis sensory transducer  46.59 
 
 
566 aa  285  2.0000000000000002e-75  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_011004  Rpal_4787  methyl-accepting chemotaxis sensory transducer  49.3 
 
 
561 aa  285  2.0000000000000002e-75  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.708956  n/a   
 
 
-
 
NC_007925  RPC_4406  methyl-accepting chemotaxis sensory transducer  46.07 
 
 
566 aa  285  2.0000000000000002e-75  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.341232 
 
 
-
 
NC_007925  RPC_4407  methyl-accepting chemotaxis sensory transducer  45.43 
 
 
566 aa  283  6.000000000000001e-75  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.365939 
 
 
-
 
NC_010172  Mext_0820  chemotaxis sensory transducer  50.72 
 
 
608 aa  283  7.000000000000001e-75  Methylobacterium extorquens PA1  Bacteria  normal  0.254614  normal  0.216431 
 
 
-
 
NC_007925  RPC_2149  methyl-accepting chemotaxis sensory transducer  47.86 
 
 
675 aa  283  1e-74  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.0391093 
 
 
-
 
NC_007643  Rru_A1293  methyl-accepting chemotaxis sensory transducer  47.11 
 
 
562 aa  282  2e-74  Rhodospirillum rubrum ATCC 11170  Bacteria  decreased coverage  0.00511002  n/a   
 
 
-
 
NC_007925  RPC_4105  methyl-accepting chemotaxis sensory transducer  49.44 
 
 
561 aa  282  2e-74  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.916882  normal 
 
 
-
 
NC_009485  BBta_1840  methyl-accepting chemotaxis sensory transducer  45.62 
 
 
561 aa  281  3e-74  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.745103 
 
 
-
 
NC_007925  RPC_3378  methyl-accepting chemotaxis sensory transducer  42.53 
 
 
563 aa  281  3e-74  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.104618  normal 
 
 
-
 
NC_007778  RPB_4286  methyl-accepting chemotaxis sensory transducer  46.2 
 
 
563 aa  281  4e-74  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_009485  BBta_6993  putative methyl-accepting chemotaxis receptor/sensory transducer  45.77 
 
 
697 aa  281  4e-74  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_007925  RPC_4104  methyl-accepting chemotaxis sensory transducer  47.33 
 
 
586 aa  280  6e-74  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.783692  normal 
 
 
-
 
NC_011757  Mchl_0779  methyl-accepting chemotaxis sensory transducer with Cache sensor  51.29 
 
 
558 aa  280  9e-74  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.0546434  normal  0.151916 
 
 
-
 
NC_008347  Mmar10_0713  methyl-accepting chemotaxis sensory transducer  34.62 
 
 
685 aa  279  1e-73  Maricaulis maris MCS10  Bacteria  normal  normal  0.862704 
 
 
-
 
NC_007925  RPC_2846  methyl-accepting chemotaxis sensory transducer  46.6 
 
 
565 aa  278  2e-73  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.430745  normal 
 
 
-
 
NC_007925  RPC_3380  methyl-accepting chemotaxis sensory transducer  45.13 
 
 
567 aa  279  2e-73  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.689596 
 
 
-
 
NC_009485  BBta_0969  methyl-accepting chemotaxis sensory transducer  46.48 
 
 
562 aa  278  3e-73  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.956339  normal  0.570918 
 
 
-
 
NC_009485  BBta_4464  methyl-accepting chemotaxis sensory transducer  45.09 
 
 
573 aa  278  3e-73  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.610641  normal  0.757777 
 
 
-
 
NC_007643  Rru_A3563  chemotaxis sensory transducer  47.41 
 
 
563 aa  277  4e-73  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_011004  Rpal_4118  methyl-accepting chemotaxis sensory transducer  46.81 
 
 
567 aa  277  4e-73  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_007778  RPB_1316  methyl-accepting chemotaxis sensory transducer  43.96 
 
 
561 aa  277  5e-73  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal  0.234166 
 
 
-
 
NC_009485  BBta_6483  methyl-accepting chemotaxis protein  43.6 
 
 
565 aa  277  6e-73  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.877741  normal 
 
 
-
 
NC_011004  Rpal_5120  methyl-accepting chemotaxis sensory transducer  44.05 
 
 
563 aa  277  6e-73  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_011004  Rpal_1830  methyl-accepting chemotaxis sensory transducer  45.28 
 
 
563 aa  275  1.0000000000000001e-72  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_007778  RPB_4280  methyl-accepting chemotaxis sensory transducer  47.35 
 
 
563 aa  275  2.0000000000000002e-72  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_010172  Mext_2072  chemotaxis sensory transducer  49.32 
 
 
556 aa  275  2.0000000000000002e-72  Methylobacterium extorquens PA1  Bacteria  normal  0.68132  normal  0.341201 
 
 
-
 
NC_007925  RPC_3377  methyl-accepting chemotaxis sensory transducer  44.92 
 
 
563 aa  275  3e-72  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.528008  normal 
 
 
-
 
NC_007643  Rru_A1408  chemotaxis sensory transducer  46.65 
 
 
568 aa  274  5.000000000000001e-72  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.591131  n/a   
 
 
-
 
NC_009485  BBta_2367  putative methyl-accepting chemotaxis receptor/sensory transducer precursor  47.74 
 
 
562 aa  273  5.000000000000001e-72  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.287749 
 
 
-
 
NC_009485  BBta_6635  methyl-accepting chemotaxis protein  45.8 
 
 
565 aa  273  5.000000000000001e-72  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.459746  normal  0.104137 
 
 
-
 
NC_011757  Mchl_3471  methyl-accepting chemotaxis sensory transducer  48.75 
 
 
561 aa  273  6e-72  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.130295  normal 
 
 
-
 
NC_011004  Rpal_3598  methyl-accepting chemotaxis sensory transducer  46.03 
 
 
672 aa  273  7e-72  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_011757  Mchl_2346  methyl-accepting chemotaxis sensory transducer  49.32 
 
 
556 aa  273  7e-72  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal  0.395485 
 
 
-
 
NC_009485  BBta_0885  putative methyl-accepting chemotaxis protein  44.53 
 
 
691 aa  273  8.000000000000001e-72  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.493714  normal 
 
 
-
 
NC_007958  RPD_1857  chemotaxis sensory transducer  46.13 
 
 
563 aa  272  1e-71  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_010172  Mext_3147  chemotaxis sensory transducer  48.47 
 
 
561 aa  271  2e-71  Methylobacterium extorquens PA1  Bacteria  normal  0.0908078  normal 
 
 
-
 
NC_007778  RPB_2653  methyl-accepting chemotaxis sensory transducer  43.19 
 
 
691 aa  272  2e-71  Rhodopseudomonas palustris HaA2  Bacteria  decreased coverage  0.00184965  normal  0.0777916 
 
 
-
 
NC_009485  BBta_5110  hypothetical protein  48.84 
 
 
688 aa  271  2e-71  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.791751 
 
 
-
 
NC_007778  RPB_2250  methyl-accepting chemotaxis sensory transducer  46.15 
 
 
670 aa  271  2.9999999999999997e-71  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_007925  RPC_4580  methyl-accepting chemotaxis sensory transducer  45.48 
 
 
563 aa  270  5.9999999999999995e-71  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.174371  normal 
 
 
-
 
NC_007925  RPC_3161  methyl-accepting chemotaxis sensory transducer  45.25 
 
 
731 aa  270  8.999999999999999e-71  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.072786  normal 
 
 
-
 
NC_011757  Mchl_4791  methyl-accepting chemotaxis sensory transducer  49.14 
 
 
563 aa  268  2e-70  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.685315  normal 
 
 
-
 
NC_009485  BBta_4269  putative methyl-accepting chemotaxis receptor/sensory transducer protein  48.2 
 
 
691 aa  269  2e-70  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.35374 
 
 
-
 
NC_007778  RPB_0914  methyl-accepting chemotaxis sensory transducer  45.84 
 
 
689 aa  268  2e-70  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal  0.497103 
 
 
-
 
NC_007778  RPB_1317  methyl-accepting chemotaxis sensory transducer  45.74 
 
 
560 aa  268  2e-70  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal  0.14669 
 
 
-
 
NC_007958  RPD_3107  chemotaxis sensory transducer  45.97 
 
 
674 aa  268  2e-70  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal  0.0664997 
 
 
-
 
NC_009485  BBta_0644  putative methyl-accepting chemotaxis receptor/sensory transducer  49.12 
 
 
565 aa  266  8e-70  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_007925  RPC_2742  methyl-accepting chemotaxis sensory transducer  45.53 
 
 
560 aa  265  2e-69  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.429688 
 
 
-
 
NC_007925  RPC_2744  methyl-accepting chemotaxis sensory transducer  44.33 
 
 
572 aa  265  3e-69  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.696609  normal  0.585687 
 
 
-
 
NC_010725  Mpop_0581  methyl-accepting chemotaxis sensory transducer  46.24 
 
 
562 aa  264  3e-69  Methylobacterium populi BJ001  Bacteria  normal  0.0281709  decreased coverage  0.00474558 
 
 
-
 
NC_007643  Rru_A0158  methyl-accepting chemotaxis sensory transducer  45.68 
 
 
561 aa  264  4e-69  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_011004  Rpal_4271  methyl-accepting chemotaxis sensory transducer  42.96 
 
 
567 aa  264  4.999999999999999e-69  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_010172  Mext_1266  chemotaxis sensory transducer  46.88 
 
 
562 aa  263  6.999999999999999e-69  Methylobacterium extorquens PA1  Bacteria  normal  normal 
 
 
-
 
NC_007778  RPB_2358  methyl-accepting chemotaxis sensory transducer  44.66 
 
 
673 aa  263  8e-69  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal  0.207811 
 
 
-
 
NC_010505  Mrad2831_3824  methyl-accepting chemotaxis sensory transducer  46.89 
 
 
561 aa  263  8.999999999999999e-69  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_007643  Rru_A2366  methyl-accepting chemotaxis sensory transducer  45.43 
 
 
560 aa  263  1e-68  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.196109  n/a   
 
 
-
 
NC_007778  RPB_0489  methyl-accepting chemotaxis sensory transducer  43.8 
 
 
564 aa  263  1e-68  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.301128  normal 
 
 
-
 
NC_007778  RPB_3610  methyl-accepting chemotaxis sensory transducer  46.33 
 
 
563 aa  262  1e-68  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.735593  normal  0.400148 
 
 
-
 
NC_009485  BBta_2843  putative histidine kinase, HAMP region  46.15 
 
 
682 aa  262  2e-68  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_007643  Rru_A2774  chemotaxis sensory transducer  32.6 
 
 
729 aa  262  2e-68  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.784687  n/a   
 
 
-
 
NC_007958  RPD_0337  chemotaxis sensory transducer  40.91 
 
 
563 aa  262  2e-68  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.760858  normal  0.789667 
 
 
-
 
NC_009485  BBta_7508  putative methyl-accepting chemotaxis protein (with a HAMP region)  47.89 
 
 
552 aa  261  3e-68  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.692825  normal 
 
 
-
 
NC_010725  Mpop_2032  methyl-accepting chemotaxis sensory transducer  49.04 
 
 
558 aa  261  3e-68  Methylobacterium populi BJ001  Bacteria  normal  normal  0.176129 
 
 
-
 
NC_010511  M446_0383  methyl-accepting chemotaxis sensory transducer  43.74 
 
 
559 aa  261  3e-68  Methylobacterium sp. 4-46  Bacteria  normal  normal  0.50218 
 
 
-
 
NC_007958  RPD_1025  methyl-accepting chemotaxis sensory transducer  45.76 
 
 
681 aa  261  3e-68  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_010725  Mpop_3344  methyl-accepting chemotaxis sensory transducer  49.03 
 
 
561 aa  261  4e-68  Methylobacterium populi BJ001  Bacteria  normal  0.828703  normal 
 
 
-
 
NC_011757  Mchl_3733  methyl-accepting chemotaxis sensory transducer  47.07 
 
 
558 aa  260  5.0000000000000005e-68  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.152196  normal 
 
 
-
 
NC_009485  BBta_2799  putative receptor/sensory transducer  48.5 
 
 
707 aa  260  6e-68  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.0655652  normal 
 
 
-
 
NC_009485  BBta_2905  putative methyl-accepting chemotaxis protein  45.07 
 
 
542 aa  260  7e-68  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.234112  normal  0.211145 
 
 
-
 
NC_010725  Mpop_1216  methyl-accepting chemotaxis sensory transducer  44.96 
 
 
562 aa  260  7e-68  Methylobacterium populi BJ001  Bacteria  normal  0.743011  normal  0.567814 
 
 
-
 
NC_009485  BBta_6717  methyl-accepting chemotaxis sensory transducer  44.7 
 
 
741 aa  260  8e-68  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.447835  normal  0.587139 
 
 
-
 
NC_010517  Mrad2831_6434  methyl-accepting chemotaxis sensory transducer  48.13 
 
 
557 aa  260  8e-68  Methylobacterium radiotolerans JCM 2831  Bacteria  n/a    normal 
 
 
-
 
NC_010505  Mrad2831_2241  methyl-accepting chemotaxis sensory transducer  50.29 
 
 
566 aa  259  9e-68  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_009485  BBta_0330  putative methyl-accepting chemotaxis receptor/sensory transducer  43.96 
 
 
676 aa  259  1e-67  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.0869057 
 
 
-
 
NC_010172  Mext_3424  chemotaxis sensory transducer  46.81 
 
 
558 aa  259  1e-67  Methylobacterium extorquens PA1  Bacteria  normal  normal  0.574813 
 
 
-
 
NC_007925  RPC_1843  methyl-accepting chemotaxis sensory transducer  44 
 
 
568 aa  259  1e-67  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.618754 
 
 
-
 
NC_009485  BBta_2901  methyl-accepting chemotaxis sensory transducer  46.56 
 
 
674 aa  258  2e-67  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.14772  normal  0.22504 
 
 
-
 
NC_007778  RPB_1977  methyl-accepting chemotaxis sensory transducer  45.07 
 
 
651 aa  258  2e-67  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.064764  normal 
 
 
-
 
NC_007925  RPC_3476  methyl-accepting chemotaxis sensory transducer  45.79 
 
 
641 aa  258  2e-67  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.640734  normal 
 
 
-
 
NC_007925  RPC_4809  methyl-accepting chemotaxis sensory transducer  46.74 
 
 
563 aa  259  2e-67  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal 
 
 
-
 
NC_011004  Rpal_4941  methyl-accepting chemotaxis sensory transducer  46.43 
 
 
563 aa  258  2e-67  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.396774  n/a   
 
 
-
 
NC_011757  Mchl_1427  methyl-accepting chemotaxis sensory transducer  46.34 
 
 
562 aa  258  3e-67  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.309452  normal 
 
 
-
 
NC_007925  RPC_3804  methyl-accepting chemotaxis sensory transducer  43.62 
 
 
655 aa  258  3e-67  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.772812  normal 
 
 
-
 
NC_007958  RPD_0994  chemotaxis sensory transducer  42.66 
 
 
656 aa  258  3e-67  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.357708  normal 
 
 
-
 
NC_007925  RPC_1795  methyl-accepting chemotaxis sensory transducer  43.38 
 
 
561 aa  258  4e-67  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.432423  normal  0.0230577 
 
 
-
 
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