More than 300 homologs were found in PanDaTox collection
for query gene Sama_0643 on replicon NC_008700
Organism: Shewanella amazonensis SB2B



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008700  Sama_0643  putative methyl-accepting chemotaxis sensory transducer  100 
 
 
478 aa  954    Shewanella amazonensis SB2B  Bacteria  hitchhiker  0.000131612  normal 
 
 
-
 
NC_009456  VC0395_0713  methyl-accepting chemotaxis protein  64.11 
 
 
473 aa  606  9.999999999999999e-173  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_009784  VIBHAR_05936  hypothetical protein  65.42 
 
 
480 aa  603  1.0000000000000001e-171  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_013457  VEA_000202  methyl-accepting chemotaxis protein  65.2 
 
 
476 aa  593  1e-168  Vibrio sp. Ex25  Bacteria  normal  0.856149  n/a   
 
 
-
 
NC_009092  Shew_2902  methyl-accepting chemotaxis sensory transducer  63.81 
 
 
479 aa  578  1e-164  Shewanella loihica PV-4  Bacteria  normal  0.56843  normal  0.473301 
 
 
-
 
NC_008345  Sfri_3719  methyl-accepting chemotaxis sensory transducer  60.75 
 
 
479 aa  568  1e-160  Shewanella frigidimarina NCIMB 400  Bacteria  normal  0.0481837  n/a   
 
 
-
 
NC_007954  Sden_3066  chemotaxis sensory transducer  60.67 
 
 
488 aa  564  1.0000000000000001e-159  Shewanella denitrificans OS217  Bacteria  normal  0.301784  n/a   
 
 
-
 
NC_008577  Shewana3_1499  methyl-accepting chemotaxis sensory transducer  43.42 
 
 
484 aa  347  3e-94  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_008321  Shewmr4_1442  methyl-accepting chemotaxis sensory transducer  43.42 
 
 
484 aa  345  8e-94  Shewanella sp. MR-4  Bacteria  normal  normal 
 
 
-
 
NC_008322  Shewmr7_1507  methyl-accepting chemotaxis sensory transducer  43.42 
 
 
484 aa  344  2e-93  Shewanella sp. MR-7  Bacteria  normal  normal 
 
 
-
 
NC_009092  Shew_2263  methyl-accepting chemotaxis sensory transducer  43.03 
 
 
482 aa  342  8e-93  Shewanella loihica PV-4  Bacteria  hitchhiker  0.00569391  normal  0.100749 
 
 
-
 
NC_009052  Sbal_2727  methyl-accepting chemotaxis sensory transducer  42.65 
 
 
484 aa  340  5e-92  Shewanella baltica OS155  Bacteria  hitchhiker  0.00000872044  n/a   
 
 
-
 
NC_009997  Sbal195_2820  methyl-accepting chemotaxis sensory transducer  42.65 
 
 
484 aa  338  8e-92  Shewanella baltica OS195  Bacteria  normal  0.0806929  normal  0.41842 
 
 
-
 
NC_009665  Shew185_2744  methyl-accepting chemotaxis sensory transducer  42.65 
 
 
484 aa  338  9.999999999999999e-92  Shewanella baltica OS185  Bacteria  normal  0.234847  n/a   
 
 
-
 
NC_011663  Sbal223_1632  methyl-accepting chemotaxis sensory transducer  42.65 
 
 
484 aa  337  2.9999999999999997e-91  Shewanella baltica OS223  Bacteria  normal  0.19262  hitchhiker  0.00019204 
 
 
-
 
NC_008345  Sfri_1416  methyl-accepting chemotaxis sensory transducer  42.03 
 
 
481 aa  337  2.9999999999999997e-91  Shewanella frigidimarina NCIMB 400  Bacteria  normal  0.493152  n/a   
 
 
-
 
NC_008700  Sama_2140  putative methyl-accepting chemotaxis sensory transducer  42.18 
 
 
479 aa  332  1e-89  Shewanella amazonensis SB2B  Bacteria  normal  normal 
 
 
-
 
NC_010506  Swoo_2947  methyl-accepting chemotaxis sensory transducer  43.6 
 
 
482 aa  329  7e-89  Shewanella woodyi ATCC 51908  Bacteria  normal  normal 
 
 
-
 
NC_007954  Sden_0861  chemotaxis sensory transducer  42.13 
 
 
481 aa  327  3e-88  Shewanella denitrificans OS217  Bacteria  normal  n/a   
 
 
-
 
NC_009438  Sputcn32_2422  methyl-accepting chemotaxis sensory transducer  42.62 
 
 
484 aa  326  6e-88  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_009901  Spea_1637  methyl-accepting chemotaxis sensory transducer  41.2 
 
 
482 aa  325  8.000000000000001e-88  Shewanella pealeana ATCC 700345  Bacteria  normal  0.301948  n/a   
 
 
-
 
NC_009831  Ssed_1664  methyl-accepting chemotaxis sensory transducer  41.72 
 
 
482 aa  325  2e-87  Shewanella sediminis HAW-EB3  Bacteria  normal  0.587548  normal 
 
 
-
 
NC_008700  Sama_1954  putative methyl-accepting chemotaxis sensory transducer  38.29 
 
 
504 aa  288  1e-76  Shewanella amazonensis SB2B  Bacteria  normal  0.0290306  normal 
 
 
-
 
NC_009092  Shew_2217  methyl-accepting chemotaxis sensory transducer  37.15 
 
 
500 aa  280  4e-74  Shewanella loihica PV-4  Bacteria  normal  0.802205  normal  0.183546 
 
 
-
 
NC_008321  Shewmr4_1807  methyl-accepting chemotaxis sensory transducer  38.25 
 
 
505 aa  279  7e-74  Shewanella sp. MR-4  Bacteria  normal  normal 
 
 
-
 
NC_008322  Shewmr7_2170  methyl-accepting chemotaxis sensory transducer  38.25 
 
 
505 aa  279  7e-74  Shewanella sp. MR-7  Bacteria  normal  normal 
 
 
-
 
NC_009665  Shew185_1899  methyl-accepting chemotaxis sensory transducer  38.07 
 
 
506 aa  277  4e-73  Shewanella baltica OS185  Bacteria  hitchhiker  0.000132488  n/a   
 
 
-
 
NC_011663  Sbal223_2420  methyl-accepting chemotaxis sensory transducer  38.07 
 
 
506 aa  277  4e-73  Shewanella baltica OS223  Bacteria  normal  0.0671416  hitchhiker  0.00255163 
 
 
-
 
NC_008577  Shewana3_1862  methyl-accepting chemotaxis sensory transducer  38.45 
 
 
505 aa  277  4e-73  Shewanella sp. ANA-3  Bacteria  normal  0.149959  normal 
 
 
-
 
NC_009052  Sbal_1872  methyl-accepting chemotaxis sensory transducer  37.67 
 
 
506 aa  276  8e-73  Shewanella baltica OS155  Bacteria  normal  0.0204582  n/a   
 
 
-
 
NC_009438  Sputcn32_1827  methyl-accepting chemotaxis sensory transducer  37.07 
 
 
502 aa  275  1.0000000000000001e-72  Shewanella putrefaciens CN-32  Bacteria  hitchhiker  0.00626539  n/a   
 
 
-
 
NC_009997  Sbal195_1906  methyl-accepting chemotaxis sensory transducer  38.34 
 
 
506 aa  275  1.0000000000000001e-72  Shewanella baltica OS195  Bacteria  hitchhiker  0.00117287  normal 
 
 
-
 
NC_004347  SO_2083  methyl-accepting chemotaxis protein  45.56 
 
 
505 aa  275  2.0000000000000002e-72  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_009831  Ssed_2599  methyl-accepting chemotaxis sensory transducer  37.8 
 
 
501 aa  274  2.0000000000000002e-72  Shewanella sediminis HAW-EB3  Bacteria  decreased coverage  0.000558383  normal 
 
 
-
 
NC_007954  Sden_1601  chemotaxis sensory transducer  44.51 
 
 
500 aa  264  3e-69  Shewanella denitrificans OS217  Bacteria  normal  0.78336  n/a   
 
 
-
 
NC_013456  VEA_003409  methyl-accepting chemotaxis protein  36.27 
 
 
467 aa  258  1e-67  Vibrio sp. Ex25  Bacteria  decreased coverage  0.0000050033  n/a   
 
 
-
 
NC_009901  Spea_2471  methyl-accepting chemotaxis sensory transducer  36.77 
 
 
499 aa  257  3e-67  Shewanella pealeana ATCC 700345  Bacteria  normal  n/a   
 
 
-
 
NC_009783  VIBHAR_02368  hypothetical protein  36.66 
 
 
472 aa  254  4.0000000000000004e-66  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_008345  Sfri_3852  methyl-accepting chemotaxis sensory transducer  39.02 
 
 
467 aa  246  6e-64  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_009831  Ssed_4500  methyl-accepting chemotaxis protein  34.02 
 
 
467 aa  234  2.0000000000000002e-60  Shewanella sediminis HAW-EB3  Bacteria  normal  hitchhiker  0.000000193555 
 
 
-
 
NC_009439  Pmen_2650  methyl-accepting chemotaxis sensory transducer  38.16 
 
 
568 aa  202  8e-51  Pseudomonas mendocina ymp  Bacteria  normal  normal 
 
 
-
 
NC_008340  Mlg_1937  methyl-accepting chemotaxis sensory transducer  39.83 
 
 
541 aa  190  4e-47  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  0.158854  normal  0.960341 
 
 
-
 
NC_009438  Sputcn32_0619  methyl-accepting chemotaxis sensory transducer  37.88 
 
 
634 aa  187  5e-46  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_008740  Maqu_2346  methyl-accepting chemotaxis sensory transducer  40.73 
 
 
564 aa  186  1.0000000000000001e-45  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_008577  Shewana3_3611  methyl-accepting chemotaxis sensory transducer  35.44 
 
 
634 aa  185  2.0000000000000003e-45  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_013889  TK90_0949  methyl-accepting chemotaxis sensory transducer  41.48 
 
 
636 aa  184  4.0000000000000006e-45  Thioalkalivibrio sp. K90mix  Bacteria  normal  normal  0.0451727 
 
 
-
 
NC_007492  Pfl01_4715  chemotaxis sensory transducer  37.57 
 
 
713 aa  182  8.000000000000001e-45  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.233277  normal  0.171171 
 
 
-
 
NC_008789  Hhal_0443  methyl-accepting chemotaxis sensory transducer  36.44 
 
 
541 aa  182  1e-44  Halorhodospira halophila SL1  Bacteria  normal  n/a   
 
 
-
 
NC_009656  PSPA7_5279  putative chemotaxis transducer  35.53 
 
 
712 aa  181  2e-44  Pseudomonas aeruginosa PA7  Bacteria  normal  0.0493383  n/a   
 
 
-
 
NC_011901  Tgr7_1963  putative methyl-accepting chemotaxis sensory transducer  40.65 
 
 
637 aa  181  4e-44  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.870205  n/a   
 
 
-
 
NC_009092  Shew_0596  methyl-accepting chemotaxis sensory transducer  35.01 
 
 
640 aa  178  2e-43  Shewanella loihica PV-4  Bacteria  normal  normal  0.270432 
 
 
-
 
NC_008463  PA14_26280  putative chemotaxis transducer  36.34 
 
 
545 aa  177  4e-43  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal  0.917899 
 
 
-
 
NC_008463  PA14_61300  putative chemotaxis transducer  35.44 
 
 
712 aa  177  5e-43  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal  0.862971 
 
 
-
 
NC_009831  Ssed_3856  methyl-accepting chemotaxis sensory transducer  36.39 
 
 
640 aa  176  9e-43  Shewanella sediminis HAW-EB3  Bacteria  normal  normal  0.825575 
 
 
-
 
NC_009831  Ssed_4463  methyl-accepting chemotaxis sensory transducer  36.58 
 
 
552 aa  176  9e-43  Shewanella sediminis HAW-EB3  Bacteria  normal  normal  0.43301 
 
 
-
 
NC_004347  SO_4053  methyl-accepting chemotaxis protein  35.66 
 
 
634 aa  176  9.999999999999999e-43  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_009438  Sputcn32_2347  methyl-accepting chemotaxis sensory transducer  36.36 
 
 
533 aa  174  2.9999999999999996e-42  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_009783  VIBHAR_00866  hypothetical protein  39.43 
 
 
418 aa  174  2.9999999999999996e-42  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_013456  VEA_004525  methyl-accepting chemotaxis protein  38.71 
 
 
418 aa  174  2.9999999999999996e-42  Vibrio sp. Ex25  Bacteria  normal  n/a   
 
 
-
 
NC_008463  PA14_29760  putative chemotaxis transducer  37.94 
 
 
714 aa  174  3.9999999999999995e-42  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_009656  PSPA7_2546  putative chemotaxis transducer  37.94 
 
 
714 aa  173  5e-42  Pseudomonas aeruginosa PA7  Bacteria  normal  0.410637  n/a   
 
 
-
 
NC_009457  VC0395_A2016  methyl-accepting chemotaxis protein  39.77 
 
 
433 aa  173  6.999999999999999e-42  Vibrio cholerae O395  Bacteria  hitchhiker  0.0000104003  n/a   
 
 
-
 
NC_013456  VEA_001822  methyl-accepting chemotaxis protein  36.91 
 
 
557 aa  172  9e-42  Vibrio sp. Ex25  Bacteria  unclonable  0.00000124429  n/a   
 
 
-
 
NC_011901  Tgr7_2492  methyl-accepting chemotaxis sensory transducer  37.5 
 
 
572 aa  172  1e-41  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_009901  Spea_3491  methyl-accepting chemotaxis sensory transducer with Cache sensor  38.29 
 
 
626 aa  172  1e-41  Shewanella pealeana ATCC 700345  Bacteria  normal  n/a   
 
 
-
 
NC_008740  Maqu_0633  methyl-accepting chemotaxis sensory transducer  39.39 
 
 
552 aa  172  1e-41  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_011312  VSAL_I2193  methyl-accepting chemotaxis protein  35.75 
 
 
697 aa  172  1e-41  Aliivibrio salmonicida LFI1238  Bacteria  normal  n/a   
 
 
-
 
NC_009784  VIBHAR_04784  histidine kinase  36.76 
 
 
628 aa  172  1e-41  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_009439  Pmen_1998  methyl-accepting chemotaxis sensory transducer  39.55 
 
 
714 aa  172  1e-41  Pseudomonas mendocina ymp  Bacteria  normal  normal  0.0164438 
 
 
-
 
NC_008739  Maqu_3979  methyl-accepting chemotaxis sensory transducer  39.39 
 
 
552 aa  172  1e-41  Marinobacter aquaeolei VT8  Bacteria  normal  0.594367  n/a   
 
 
-
 
NC_011901  Tgr7_0157  methyl-accepting chemotaxis sensory transducer  35.57 
 
 
646 aa  171  2e-41  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.805637  n/a   
 
 
-
 
NC_004578  PSPTO_2616  methyl-accepting chemotaxis protein  33.91 
 
 
633 aa  171  3e-41  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  decreased coverage  0.00438795  n/a   
 
 
-
 
NC_009654  Mmwyl1_1586  methyl-accepting chemotaxis sensory transducer  33.79 
 
 
626 aa  171  3e-41  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_009439  Pmen_3669  methyl-accepting chemotaxis sensory transducer  38.31 
 
 
716 aa  171  4e-41  Pseudomonas mendocina ymp  Bacteria  normal  0.170337  normal 
 
 
-
 
NC_010501  PputW619_1254  methyl-accepting chemotaxis sensory transducer  34.09 
 
 
639 aa  170  4e-41  Pseudomonas putida W619  Bacteria  normal  0.523103  normal  0.0331864 
 
 
-
 
NC_011901  Tgr7_0712  putative methyl-accepting chemotaxis sensory transducer  37.84 
 
 
624 aa  171  4e-41  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_008345  Sfri_0581  methyl-accepting chemotaxis sensory transducer  35.53 
 
 
554 aa  170  5e-41  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_009457  VC0395_A2596  methyl-accepting chemotaxis protein  35.44 
 
 
564 aa  170  6e-41  Vibrio cholerae O395  Bacteria  unclonable  0.00000000000057467  n/a   
 
 
-
 
NC_009997  Sbal195_1793  methyl-accepting chemotaxis sensory transducer  33.6 
 
 
533 aa  169  1e-40  Shewanella baltica OS195  Bacteria  normal  0.0175347  normal  0.776493 
 
 
-
 
NC_008340  Mlg_1098  methyl-accepting chemotaxis sensory transducer  31.84 
 
 
637 aa  169  1e-40  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  0.0167241  normal 
 
 
-
 
NC_011663  Sbal223_2530  methyl-accepting chemotaxis sensory transducer with Cache sensor  33.6 
 
 
533 aa  169  1e-40  Shewanella baltica OS223  Bacteria  normal  0.616311  hitchhiker  0.00580613 
 
 
-
 
NC_011312  VSAL_I2678  methyl-accepting chemotaxis protein  35.56 
 
 
533 aa  168  2e-40  Aliivibrio salmonicida LFI1238  Bacteria  normal  0.221197  n/a   
 
 
-
 
NC_008345  Sfri_1939  methyl-accepting chemotaxis sensory transducer  34.05 
 
 
638 aa  168  2e-40  Shewanella frigidimarina NCIMB 400  Bacteria  normal  0.573171  n/a   
 
 
-
 
NC_004578  PSPTO_1059  methyl-accepting chemotaxis protein  33.78 
 
 
629 aa  167  2.9999999999999998e-40  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_009092  Shew_0808  methyl-accepting chemotaxis sensory transducer  37.92 
 
 
554 aa  167  2.9999999999999998e-40  Shewanella loihica PV-4  Bacteria  normal  normal 
 
 
-
 
NC_007912  Sde_2316  putative methyl-accepting chemotaxis sensory transducer  34.88 
 
 
548 aa  167  2.9999999999999998e-40  Saccharophagus degradans 2-40  Bacteria  normal  normal  0.0208981 
 
 
-
 
NC_007005  Psyr_0380  histidine kinase, HAMP region: chemotaxis sensory transducer  33.51 
 
 
638 aa  167  4e-40  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_010322  PputGB1_5070  methyl-accepting chemotaxis sensory transducer  34.81 
 
 
638 aa  167  4e-40  Pseudomonas putida GB-1  Bacteria  normal  normal 
 
 
-
 
NC_011901  Tgr7_1324  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  38.21 
 
 
523 aa  167  5e-40  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.587106  n/a   
 
 
-
 
NC_011901  Tgr7_1674  methyl-accepting chemotaxis sensory transducer  35.8 
 
 
543 aa  167  5.9999999999999996e-40  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_004578  PSPTO_2511  methyl-accepting chemotaxis protein  34.4 
 
 
653 aa  166  5.9999999999999996e-40  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.295069  n/a   
 
 
-
 
NC_009457  VC0395_A1249  methyl-accepting chemotaxis protein  34.58 
 
 
596 aa  166  5.9999999999999996e-40  Vibrio cholerae O395  Bacteria  hitchhiker  0.000483868  n/a   
 
 
-
 
NC_009439  Pmen_3139  methyl-accepting chemotaxis sensory transducer  34.71 
 
 
640 aa  166  5.9999999999999996e-40  Pseudomonas mendocina ymp  Bacteria  normal  0.753261  normal  0.0120166 
 
 
-
 
NC_009901  Spea_3492  methyl-accepting chemotaxis sensory transducer with Cache sensor  38.17 
 
 
626 aa  166  6.9999999999999995e-40  Shewanella pealeana ATCC 700345  Bacteria  normal  n/a   
 
 
-
 
NC_007492  Pfl01_4382  chemotaxis sensory transducer  36.82 
 
 
738 aa  166  6.9999999999999995e-40  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal  0.218372 
 
 
-
 
NC_009901  Spea_4196  methyl-accepting chemotaxis sensory transducer  37.39 
 
 
552 aa  166  6.9999999999999995e-40  Shewanella pealeana ATCC 700345  Bacteria  normal  0.14959  n/a   
 
 
-
 
NC_008322  Shewmr7_3799  methyl-accepting chemotaxis sensory transducer  34.49 
 
 
527 aa  166  6.9999999999999995e-40  Shewanella sp. MR-7  Bacteria  normal  normal 
 
 
-
 
NC_008577  Shewana3_3924  methyl-accepting chemotaxis sensory transducer  32.48 
 
 
527 aa  166  9e-40  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_007005  Psyr_0905  histidine kinase, HAMP region: chemotaxis sensory transducer  33.6 
 
 
640 aa  166  9e-40  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.746842  normal 
 
 
-
 
NC_009656  PSPA7_2234  putative chemotaxis transducer  36.06 
 
 
545 aa  166  9e-40  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
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