More than 300 homologs were found in PanDaTox collection
for query gene PCC7424_0178 on replicon NC_011729
Organism: Cyanothece sp. PCC 7424



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011729  PCC7424_0178  response regulator receiver modulated diguanylate cyclase  100 
 
 
322 aa  657    Cyanothece sp. PCC 7424  Bacteria  n/a    normal  0.895619 
 
 
-
 
NC_013161  Cyan8802_1169  response regulator receiver modulated diguanylate cyclase  61.64 
 
 
308 aa  387  1e-106  Cyanothece sp. PCC 8802  Bacteria  normal  normal 
 
 
-
 
NC_011726  PCC8801_1139  response regulator receiver modulated diguanylate cyclase  61.64 
 
 
308 aa  387  1e-106  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_011726  PCC8801_2041  response regulator receiver modulated diguanylate cyclase  54.07 
 
 
317 aa  348  9e-95  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_013161  Cyan8802_2067  response regulator receiver modulated diguanylate cyclase  54.07 
 
 
317 aa  348  9e-95  Cyanothece sp. PCC 8802  Bacteria  normal  normal 
 
 
-
 
NC_014248  Aazo_1477  response regulator receiver modulated diguanylate cyclase  55.99 
 
 
317 aa  345  5e-94  'Nostoc azollae' 0708  Bacteria  normal  n/a   
 
 
-
 
NC_011831  Cagg_1006  response regulator receiver modulated diguanylate cyclase  44.7 
 
 
312 aa  256  4e-67  Chloroflexus aggregans DSM 9485  Bacteria  normal  normal 
 
 
-
 
NC_013216  Dtox_1577  response regulator receiver modulated diguanylate cyclase  40.58 
 
 
314 aa  237  2e-61  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  normal 
 
 
-
 
NC_011891  A2cp1_3625  response regulator receiver modulated diguanylate cyclase  40.13 
 
 
322 aa  231  1e-59  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_011145  AnaeK_3557  response regulator receiver modulated diguanylate cyclase  40.46 
 
 
322 aa  230  3e-59  Anaeromyxobacter sp. K  Bacteria  normal  0.457648  n/a   
 
 
-
 
NC_007912  Sde_2463  response regulator receiver modulated diguanylate cyclase  40.54 
 
 
301 aa  229  6e-59  Saccharophagus degradans 2-40  Bacteria  normal  normal 
 
 
-
 
NC_011729  PCC7424_2263  response regulator receiver modulated diguanylate cyclase  37.5 
 
 
317 aa  226  5.0000000000000005e-58  Cyanothece sp. PCC 7424  Bacteria  n/a    hitchhiker  0.00220053 
 
 
-
 
NC_007760  Adeh_3473  response regulator receiver modulated diguanylate cyclase  40.13 
 
 
351 aa  225  9e-58  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  n/a   
 
 
-
 
NC_010814  Glov_2955  response regulator receiver modulated diguanylate cyclase  40.53 
 
 
308 aa  223  4.9999999999999996e-57  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_011729  PCC7424_0984  response regulator receiver modulated diguanylate cyclase  40.84 
 
 
353 aa  221  1.9999999999999999e-56  Cyanothece sp. PCC 7424  Bacteria  n/a    normal  0.194443 
 
 
-
 
NC_010002  Daci_1192  response regulator receiver modulated diguanylate cyclase  40.51 
 
 
316 aa  219  3.9999999999999997e-56  Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
NC_009483  Gura_0195  response regulator receiver modulated diguanylate cyclase  40.94 
 
 
309 aa  216  2.9999999999999998e-55  Geobacter uraniireducens Rf4  Bacteria  normal  0.0106599  n/a   
 
 
-
 
NC_011884  Cyan7425_3210  response regulator receiver modulated diguanylate cyclase  36.84 
 
 
337 aa  216  4e-55  Cyanothece sp. PCC 7425  Bacteria  normal  0.32327  normal  0.712325 
 
 
-
 
NC_014248  Aazo_5066  response regulator receiver modulated diguanylate cyclase  40.31 
 
 
338 aa  216  4e-55  'Nostoc azollae' 0708  Bacteria  normal  n/a   
 
 
-
 
NC_013422  Hneap_0133  response regulator receiver modulated diguanylate cyclase  40.94 
 
 
461 aa  215  9e-55  Halothiobacillus neapolitanus c2  Bacteria  normal  n/a   
 
 
-
 
NC_010814  Glov_0963  response regulator receiver modulated diguanylate cyclase  39.73 
 
 
300 aa  214  9.999999999999999e-55  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_007517  Gmet_0069  response regulator receiver modulated diguanylate cyclase  36.57 
 
 
314 aa  213  3.9999999999999995e-54  Geobacter metallireducens GS-15  Bacteria  normal  normal  0.840661 
 
 
-
 
NC_012918  GM21_2951  response regulator receiver modulated diguanylate cyclase  38.74 
 
 
306 aa  213  3.9999999999999995e-54  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_011146  Gbem_1332  response regulator receiver modulated diguanylate cyclase  38.41 
 
 
306 aa  212  4.9999999999999996e-54  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_008576  Mmc1_3528  response regulator receiver modulated diguanylate cyclase  41.81 
 
 
310 aa  212  5.999999999999999e-54  Magnetococcus sp. MC-1  Bacteria  normal  normal 
 
 
-
 
NC_008609  Ppro_1341  response regulator receiver modulated diguanylate cyclase  39.27 
 
 
319 aa  209  4e-53  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_008789  Hhal_0365  response regulator receiver modulated diguanylate cyclase  38.36 
 
 
308 aa  209  5e-53  Halorhodospira halophila SL1  Bacteria  normal  n/a   
 
 
-
 
NC_009675  Anae109_2257  response regulator receiver modulated diguanylate cyclase  37.04 
 
 
509 aa  208  1e-52  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  normal  0.0520127 
 
 
-
 
NC_009831  Ssed_1382  response regulator receiver protein  38.85 
 
 
302 aa  206  5e-52  Shewanella sediminis HAW-EB3  Bacteria  normal  normal 
 
 
-
 
NC_009092  Shew_3790  response regulator receiver modulated diguanylate cyclase  39.12 
 
 
300 aa  205  7e-52  Shewanella loihica PV-4  Bacteria  normal  normal 
 
 
-
 
NC_002939  GSU1643  GGDEF/response regulator receiver domain-containing protein  38.28 
 
 
316 aa  205  1e-51  Geobacter sulfurreducens PCA  Bacteria  normal  0.176359  n/a   
 
 
-
 
NC_008700  Sama_0065  response regulator receiver protein  36.75 
 
 
305 aa  204  2e-51  Shewanella amazonensis SB2B  Bacteria  normal  normal 
 
 
-
 
NC_010506  Swoo_1513  response regulator receiver modulated diguanylate cyclase  38.85 
 
 
301 aa  204  2e-51  Shewanella woodyi ATCC 51908  Bacteria  normal  normal  0.0153071 
 
 
-
 
NC_013173  Dbac_2032  response regulator receiver modulated diguanylate cyclase  38.63 
 
 
310 aa  203  3e-51  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_010814  Glov_3614  response regulator receiver modulated diguanylate cyclase  36.27 
 
 
310 aa  203  3e-51  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_002939  GSU3376  GGDEF/response regulator receiver domain-containing protein  39.67 
 
 
308 aa  202  5e-51  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_007484  Noc_0847  two component diguanylate cyclase  40.06 
 
 
327 aa  202  5e-51  Nitrosococcus oceani ATCC 19707  Bacteria  normal  n/a   
 
 
-
 
NC_007005  Psyr_2939  GGDEF  39.48 
 
 
318 aa  201  9.999999999999999e-51  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.417006  normal 
 
 
-
 
NC_009675  Anae109_3583  response regulator receiver modulated diguanylate cyclase  40.26 
 
 
322 aa  201  9.999999999999999e-51  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  hitchhiker  0.000864033 
 
 
-
 
NC_011146  Gbem_1228  response regulator receiver modulated diguanylate cyclase  39.05 
 
 
349 aa  201  9.999999999999999e-51  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_011663  Sbal223_4132  response regulator receiver modulated diguanylate cyclase  39.74 
 
 
310 aa  199  6e-50  Shewanella baltica OS223  Bacteria  normal  normal 
 
 
-
 
NC_008228  Patl_2089  diguanylate cyclase  38.22 
 
 
306 aa  198  9e-50  Pseudoalteromonas atlantica T6c  Bacteria  normal  n/a   
 
 
-
 
NC_009997  Sbal195_4336  response regulator receiver modulated diguanylate cyclase  39.4 
 
 
310 aa  197  2.0000000000000003e-49  Shewanella baltica OS195  Bacteria  normal  normal 
 
 
-
 
NC_007413  Ava_1030  response regulator receiver modulated diguanylate cyclase  38.22 
 
 
330 aa  197  2.0000000000000003e-49  Anabaena variabilis ATCC 29413  Bacteria  normal  normal  0.33399 
 
 
-
 
NC_009665  Shew185_4204  response regulator receiver modulated diguanylate cyclase  39.74 
 
 
310 aa  197  3e-49  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_008700  Sama_0748  response regulator receiver protein  36.68 
 
 
312 aa  196  3e-49  Shewanella amazonensis SB2B  Bacteria  normal  normal 
 
 
-
 
NC_008577  Shewana3_4015  response regulator receiver modulated diguanylate cyclase  38.41 
 
 
315 aa  196  4.0000000000000005e-49  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_007760  Adeh_1556  response regulator receiver modulated diguanylate cyclase  36.05 
 
 
300 aa  196  5.000000000000001e-49  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  n/a   
 
 
-
 
NC_011145  AnaeK_2309  response regulator receiver modulated diguanylate cyclase  35.64 
 
 
434 aa  195  1e-48  Anaeromyxobacter sp. K  Bacteria  normal  0.484645  n/a   
 
 
-
 
NC_011891  A2cp1_2397  response regulator receiver modulated diguanylate cyclase  35.64 
 
 
434 aa  195  1e-48  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  0.593336  n/a   
 
 
-
 
NC_012880  Dd703_3123  response regulator receiver modulated diguanylate cyclase  37.21 
 
 
312 aa  193  4e-48  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_007954  Sden_1684  GGDEF domain-containing protein  37.29 
 
 
323 aa  192  7e-48  Shewanella denitrificans OS217  Bacteria  normal  n/a   
 
 
-
 
NC_010814  Glov_2442  response regulator receiver modulated diguanylate cyclase  36.54 
 
 
316 aa  191  1e-47  Geobacter lovleyi SZ  Bacteria  normal  0.103678  n/a   
 
 
-
 
NC_007575  Suden_0218  diguanylate cyclase  41.47 
 
 
304 aa  191  1e-47  Sulfurimonas denitrificans DSM 1251  Bacteria  normal  n/a   
 
 
-
 
NC_008228  Patl_3669  diguanylate cyclase  36.21 
 
 
300 aa  191  1e-47  Pseudoalteromonas atlantica T6c  Bacteria  normal  0.0119902  n/a   
 
 
-
 
NC_012560  Avin_29300  Response regulator  37.29 
 
 
310 aa  191  2e-47  Azotobacter vinelandii DJ  Bacteria  normal  n/a   
 
 
-
 
NC_007354  Ecaj_0304  response regulator PleD  39.13 
 
 
458 aa  190  2e-47  Ehrlichia canis str. Jake  Bacteria  normal  0.0864091  n/a   
 
 
-
 
NC_008346  Swol_0600  response regulator receiver protein  38.18 
 
 
301 aa  190  2e-47  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  normal  n/a   
 
 
-
 
NC_010424  Daud_1846  response regulator receiver modulated diguanylate cyclase  34.88 
 
 
314 aa  191  2e-47  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  n/a   
 
 
-
 
NC_008228  Patl_4177  diguanylate cyclase  38.82 
 
 
347 aa  190  2e-47  Pseudoalteromonas atlantica T6c  Bacteria  normal  n/a   
 
 
-
 
NC_002978  WD0221  response regulator PleD  40.15 
 
 
460 aa  189  8e-47  Wolbachia endosymbiont of Drosophila melanogaster  Bacteria  normal  n/a   
 
 
-
 
NC_002939  GSU2313  response regulator  36.82 
 
 
301 aa  187  1e-46  Geobacter sulfurreducens PCA  Bacteria  normal  0.483613  n/a   
 
 
-
 
NC_007799  ECH_0773  response regulator PleD  37.95 
 
 
458 aa  188  1e-46  Ehrlichia chaffeensis str. Arkansas  Bacteria  normal  n/a   
 
 
-
 
NC_011138  MADE_00724  putative response regulator  38.54 
 
 
329 aa  187  2e-46  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  n/a   
 
 
-
 
NC_013173  Dbac_0019  response regulator receiver modulated diguanylate cyclase  36.11 
 
 
341 aa  186  4e-46  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.0416556  n/a   
 
 
-
 
NC_007614  Nmul_A2693  diguanylate cyclase  35.03 
 
 
302 aa  186  4e-46  Nitrosospira multiformis ATCC 25196  Bacteria  normal  n/a   
 
 
-
 
NC_011726  PCC8801_0820  response regulator receiver modulated diguanylate cyclase/phosphodiesterase  35.74 
 
 
593 aa  186  5e-46  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_013216  Dtox_3787  response regulator receiver modulated diguanylate cyclase  36.5 
 
 
344 aa  186  5e-46  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  0.919533  normal  0.90313 
 
 
-
 
NC_013161  Cyan8802_0849  response regulator receiver modulated diguanylate cyclase/phosphodiesterase  35.74 
 
 
593 aa  186  5e-46  Cyanothece sp. PCC 8802  Bacteria  normal  0.386146  normal 
 
 
-
 
NC_008347  Mmar10_1277  response regulator receiver modulated diguanylate cyclase  37.5 
 
 
454 aa  186  7e-46  Maricaulis maris MCS10  Bacteria  normal  0.410696  normal  0.0388481 
 
 
-
 
NC_008347  Mmar10_0119  response regulator receiver modulated diguanylate cyclase  34.54 
 
 
324 aa  185  7e-46  Maricaulis maris MCS10  Bacteria  normal  0.969085  normal 
 
 
-
 
NC_010718  Nther_1974  response regulator receiver modulated diguanylate cyclase  35.22 
 
 
340 aa  185  8e-46  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  normal  0.098619 
 
 
-
 
NC_008254  Meso_1348  response regulator PleD  38.84 
 
 
457 aa  184  1.0000000000000001e-45  Chelativorans sp. BNC1  Bacteria  normal  n/a   
 
 
-
 
NC_009654  Mmwyl1_2023  response regulator receiver modulated diguanylate cyclase  35.92 
 
 
312 aa  184  2.0000000000000003e-45  Marinomonas sp. MWYL1  Bacteria  normal  0.174701  normal 
 
 
-
 
NC_011831  Cagg_0841  response regulator receiver modulated diguanylate cyclase  34 
 
 
715 aa  184  2.0000000000000003e-45  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.101081  normal 
 
 
-
 
NC_010524  Lcho_3544  response regulator receiver modulated diguanylate cyclase  35.91 
 
 
322 aa  184  2.0000000000000003e-45  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  0.0106122 
 
 
-
 
NC_009654  Mmwyl1_1645  response regulator receiver modulated diguanylate cyclase  36.3 
 
 
308 aa  183  3e-45  Marinomonas sp. MWYL1  Bacteria  normal  normal  0.456967 
 
 
-
 
NC_009719  Plav_2815  response regulator receiver modulated diguanylate cyclase  35.69 
 
 
457 aa  183  4.0000000000000006e-45  Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.631579  normal  0.0857187 
 
 
-
 
NC_007912  Sde_3005  response regulator receiver modulated diguanylate cyclase  35.91 
 
 
303 aa  183  4.0000000000000006e-45  Saccharophagus degradans 2-40  Bacteria  normal  hitchhiker  0.000288968 
 
 
-
 
NC_009439  Pmen_0723  response regulator receiver modulated diguanylate cyclase  33.23 
 
 
540 aa  183  4.0000000000000006e-45  Pseudomonas mendocina ymp  Bacteria  normal  normal 
 
 
-
 
NC_011830  Dhaf_1561  response regulator receiver modulated diguanylate cyclase  37.74 
 
 
455 aa  182  6e-45  Desulfitobacterium hafniense DCB-2  Bacteria  hitchhiker  0.0000000734361  n/a   
 
 
-
 
NC_009485  BBta_4746  response regulator PleD  36.82 
 
 
466 aa  182  6e-45  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.0979514  normal  0.753316 
 
 
-
 
NC_011728  BbuZS7_0421  response regulatory protein  37.95 
 
 
305 aa  181  2e-44  Borrelia burgdorferi ZS7  Bacteria  normal  0.972098  n/a   
 
 
-
 
NC_010506  Swoo_0828  response regulator receiver modulated diguanylate cyclase  37.23 
 
 
324 aa  180  2.9999999999999997e-44  Shewanella woodyi ATCC 51908  Bacteria  normal  normal 
 
 
-
 
NC_008609  Ppro_0115  response regulator receiver modulated diguanylate cyclase  37.31 
 
 
304 aa  179  7e-44  Pelobacter propionicus DSM 2379  Bacteria  normal  0.113218  n/a   
 
 
-
 
NC_011901  Tgr7_2459  response regulator receiver modulated diguanylate cyclase  34.82 
 
 
335 aa  178  1e-43  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.685644  n/a   
 
 
-
 
NC_011369  Rleg2_1290  response regulator PleD  36.12 
 
 
457 aa  177  2e-43  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.0138689  hitchhiker  0.00259394 
 
 
-
 
NC_012850  Rleg_1382  response regulator PleD  36.12 
 
 
457 aa  176  6e-43  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.390598 
 
 
-
 
NC_010338  Caul_1497  response regulator PleD  35.2 
 
 
454 aa  176  6e-43  Caulobacter sp. K31  Bacteria  normal  normal  0.122959 
 
 
-
 
NC_011662  Tmz1t_3851  response regulator receiver modulated diguanylate cyclase  32.48 
 
 
634 aa  175  7e-43  Thauera sp. MZ1T  Bacteria  normal  0.0571122  n/a   
 
 
-
 
NC_002977  MCA1203  response regulator  32.83 
 
 
634 aa  176  7e-43  Methylococcus capsulatus str. Bath  Bacteria  normal  n/a   
 
 
-
 
NC_013522  Taci_0157  response regulator receiver modulated diguanylate cyclase  34.55 
 
 
917 aa  175  9.999999999999999e-43  Thermanaerovibrio acidaminovorans DSM 6589  Bacteria  normal  n/a   
 
 
-
 
NC_007925  RPC_3308  response regulator PleD  36.21 
 
 
457 aa  175  9.999999999999999e-43  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.268667  normal 
 
 
-
 
NC_004578  PSPTO_4837  response regulator  31.39 
 
 
551 aa  174  1.9999999999999998e-42  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.978785  n/a   
 
 
-
 
NC_007406  Nwi_1432  response regulator PleD  35.88 
 
 
457 aa  174  1.9999999999999998e-42  Nitrobacter winogradskyi Nb-255  Bacteria  normal  normal 
 
 
-
 
NC_009831  Ssed_1645  hypothetical protein  34.78 
 
 
344 aa  174  1.9999999999999998e-42  Shewanella sediminis HAW-EB3  Bacteria  normal  0.176846  normal 
 
 
-
 
NC_009654  Mmwyl1_0135  response regulator receiver modulated diguanylate cyclase  37.42 
 
 
306 aa  174  1.9999999999999998e-42  Marinomonas sp. MWYL1  Bacteria  normal  normal  0.248217 
 
 
-
 
NC_008463  PA14_16500  two-component response regulator  35.56 
 
 
347 aa  174  1.9999999999999998e-42  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.67066  normal 
 
 
-
 
NC_009636  Smed_0926  response regulator PleD  37.55 
 
 
455 aa  173  2.9999999999999996e-42  Sinorhizobium medicae WSM419  Bacteria  normal  normal  0.773886 
 
 
-
 
NC_008345  Sfri_2812  diguanylate cyclase  32.28 
 
 
315 aa  173  2.9999999999999996e-42  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
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