Gene Meso_1348 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMeso_1348 
SymbolpleD 
ID4181582 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChelativorans sp. BNC1 
KingdomBacteria 
Replicon accessionNC_008254 
Strand
Start bp1440155 
End bp1441528 
Gene Length1374 bp 
Protein Length457 aa 
Translation table11 
GC content61% 
IMG OID638067237 
Productresponse regulator PleD 
Protein accessionYP_673909 
Protein GI110633701 
COG category[T] Signal transduction mechanisms 
COG ID[COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain 
TIGRFAM ID[TIGR00254] diguanylate cyclase (GGDEF) domain 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTGCCC GTATCCTTGT GGTGGATGAT GTTCCTGCCA ATCTGCGCCT GCTGGAGGCA 
CGGCTCCTCG CCGAATATTA CGACGTGGTG ACCGCCCGTT CGGGACCGGA CGCCATCGAT
ATCTGCGAAT CAAGCAAGAT CGACGTTGTG CTCCTGGACG TGATGATGCC GGGAATGGAC
GGCTTCGAGG TCTGCCGGCG CTTGAAAGCC GATCCGCTCA CGACGCATAT CCCCGTGATC
ATGATCACCG CGCTCGACCA GCCGTCGGAT CGCGTCCGCG GCTTGGAGGC CGGAGCCGAT
GATTTTCTGA CGAAGCCAGT CAACGACCTG CAGCTTCTGA CGCGTGTAAA GAGCCTAACC
AGGCTCAAGG CATTGACGGA CGAGCTCAGG CTGCGCGCGG CTACGACGCG CAACATCGGC
ATTGAGCAGC TGCTGCAGAA GAAGAGTGTC GATGACGAGG AAAAGCCTTC GGTGCTCCTC
ATCGATGAGG ATAAAGCTGC CGGCAGGCAG CTTGCCAGAA TGCTGCAGGA TCATTTTGCG
CTGGATGCCG TCGACGACCC GCAGGAAGGC TTGGTTCGCG CCGCCGAAAG GTCTTACGAG
TGCATCATCG TATCGAGCAG CTTTGTTGCC TATGACCCGC TGCGGCTGTG CTCGCAGCTA
AGGGCGATGG ACCGCACGCG GCTCGTTCCC ATCATCCTCT TTGCGGGCGA GGGCGATGAG
ACAGTGATCA TTCGCGGGCT CGAACTGGCG GTGAATGATT ATGTGCTGCG CCCGGTGGAA
CGGCAGGAAC TGATCGCGCG GCTGCGCACG CAGATCCGCC GCAAGCGATA CAATGACAGC
CTGCGCTCCA GTGTCGCCCA GACTGTGGAA ATGGCGATCA CCGATCCGCT GACCGGCCTT
CATAACCGGC GGTATCTTGA TAGTCACCTT CAGAGCCTTT TCGACCGCGC GGAGGCCAGG
CGCCGTCCGC TTTCGGTCAT GATCGTCGAT ATCGACCGCT TCAAGTCAAT CAACGACACC
TACGGACATG ATGGCGGTGA CGCGGTATTG CGCGCGGTGG CCGCGCGGCT GCGCCGGAGC
CTGCGTGGGA TCGATCTCGT GTGCCGTTAC GGCGGTGAAG AATTCGTGGT TGTGATGCCG
GAAACGGAAC TTTCGATCGC AGAGCGCGTC GGCGAGCGCA TCAGGCAGCA GATCGCCGAA
GGCGCTTTTT TGCTGGGCGA TTCAGCCGGT GCCATTTCTG TCACGGTCAG CATAGGGGTG
GCGGCGCTTC TCCAGCCGCA GGATACCGTG GAGGCGCTGA TGAAGCGCGC TGATATGGCG
CTTTATGAGG CGAAGTCGAG CGGTCGCAAT CGGGTGGTCG CACCGGCTGC CTGA
 
Protein sequence
MTARILVVDD VPANLRLLEA RLLAEYYDVV TARSGPDAID ICESSKIDVV LLDVMMPGMD 
GFEVCRRLKA DPLTTHIPVI MITALDQPSD RVRGLEAGAD DFLTKPVNDL QLLTRVKSLT
RLKALTDELR LRAATTRNIG IEQLLQKKSV DDEEKPSVLL IDEDKAAGRQ LARMLQDHFA
LDAVDDPQEG LVRAAERSYE CIIVSSSFVA YDPLRLCSQL RAMDRTRLVP IILFAGEGDE
TVIIRGLELA VNDYVLRPVE RQELIARLRT QIRRKRYNDS LRSSVAQTVE MAITDPLTGL
HNRRYLDSHL QSLFDRAEAR RRPLSVMIVD IDRFKSINDT YGHDGGDAVL RAVAARLRRS
LRGIDLVCRY GGEEFVVVMP ETELSIAERV GERIRQQIAE GAFLLGDSAG AISVTVSIGV
AALLQPQDTV EALMKRADMA LYEAKSSGRN RVVAPAA