More than 300 homologs were found in PanDaTox collection
for query gene PCC7424_2263 on replicon NC_011729
Organism: Cyanothece sp. PCC 7424



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011729  PCC7424_2263  response regulator receiver modulated diguanylate cyclase  100 
 
 
317 aa  632  1e-180  Cyanothece sp. PCC 7424  Bacteria  n/a    hitchhiker  0.00220053 
 
 
-
 
NC_013161  Cyan8802_2067  response regulator receiver modulated diguanylate cyclase  39.12 
 
 
317 aa  257  1e-67  Cyanothece sp. PCC 8802  Bacteria  normal  normal 
 
 
-
 
NC_011726  PCC8801_2041  response regulator receiver modulated diguanylate cyclase  39.12 
 
 
317 aa  257  1e-67  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_011726  PCC8801_1139  response regulator receiver modulated diguanylate cyclase  37.66 
 
 
308 aa  234  2.0000000000000002e-60  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_013161  Cyan8802_1169  response regulator receiver modulated diguanylate cyclase  37.66 
 
 
308 aa  234  2.0000000000000002e-60  Cyanothece sp. PCC 8802  Bacteria  normal  normal 
 
 
-
 
NC_011729  PCC7424_0178  response regulator receiver modulated diguanylate cyclase  37.5 
 
 
322 aa  226  4e-58  Cyanothece sp. PCC 7424  Bacteria  n/a    normal  0.895619 
 
 
-
 
NC_014248  Aazo_1477  response regulator receiver modulated diguanylate cyclase  33.65 
 
 
317 aa  213  3.9999999999999995e-54  'Nostoc azollae' 0708  Bacteria  normal  n/a   
 
 
-
 
NC_011831  Cagg_1006  response regulator receiver modulated diguanylate cyclase  31.79 
 
 
312 aa  171  2e-41  Chloroflexus aggregans DSM 9485  Bacteria  normal  normal 
 
 
-
 
NC_008576  Mmc1_3528  response regulator receiver modulated diguanylate cyclase  32.89 
 
 
310 aa  152  5.9999999999999996e-36  Magnetococcus sp. MC-1  Bacteria  normal  normal 
 
 
-
 
NC_009831  Ssed_1382  response regulator receiver protein  30.41 
 
 
302 aa  147  2.0000000000000003e-34  Shewanella sediminis HAW-EB3  Bacteria  normal  normal 
 
 
-
 
NC_010814  Glov_2955  response regulator receiver modulated diguanylate cyclase  29.84 
 
 
308 aa  142  5e-33  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_007484  Noc_0847  two component diguanylate cyclase  28.17 
 
 
327 aa  140  1.9999999999999998e-32  Nitrosococcus oceani ATCC 19707  Bacteria  normal  n/a   
 
 
-
 
NC_007912  Sde_2463  response regulator receiver modulated diguanylate cyclase  26.01 
 
 
301 aa  140  3.9999999999999997e-32  Saccharophagus degradans 2-40  Bacteria  normal  normal 
 
 
-
 
NC_008228  Patl_4177  diguanylate cyclase  27.22 
 
 
347 aa  137  2e-31  Pseudoalteromonas atlantica T6c  Bacteria  normal  n/a   
 
 
-
 
NC_013173  Dbac_2032  response regulator receiver modulated diguanylate cyclase  30.1 
 
 
310 aa  137  2e-31  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_009483  Gura_0195  response regulator receiver modulated diguanylate cyclase  26.94 
 
 
309 aa  134  9.999999999999999e-31  Geobacter uraniireducens Rf4  Bacteria  normal  0.0106599  n/a   
 
 
-
 
NC_002939  GSU1671  response regulator/GGDEF domain-containing protein  25.91 
 
 
322 aa  134  3e-30  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_010814  Glov_0963  response regulator receiver modulated diguanylate cyclase  26.17 
 
 
300 aa  133  3e-30  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_010506  Swoo_1513  response regulator receiver modulated diguanylate cyclase  29.8 
 
 
301 aa  132  6e-30  Shewanella woodyi ATCC 51908  Bacteria  normal  normal  0.0153071 
 
 
-
 
NC_007354  Ecaj_0304  response regulator PleD  29.04 
 
 
458 aa  132  6.999999999999999e-30  Ehrlichia canis str. Jake  Bacteria  normal  0.0864091  n/a   
 
 
-
 
NC_008228  Patl_2089  diguanylate cyclase  29.08 
 
 
306 aa  130  2.0000000000000002e-29  Pseudoalteromonas atlantica T6c  Bacteria  normal  n/a   
 
 
-
 
NC_007413  Ava_1030  response regulator receiver modulated diguanylate cyclase  27.15 
 
 
330 aa  130  4.0000000000000003e-29  Anabaena variabilis ATCC 29413  Bacteria  normal  normal  0.33399 
 
 
-
 
NC_010814  Glov_2442  response regulator receiver modulated diguanylate cyclase  25.67 
 
 
316 aa  129  5.0000000000000004e-29  Geobacter lovleyi SZ  Bacteria  normal  0.103678  n/a   
 
 
-
 
NC_011891  A2cp1_3625  response regulator receiver modulated diguanylate cyclase  26.64 
 
 
322 aa  129  7.000000000000001e-29  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_007799  ECH_0773  response regulator PleD  28.09 
 
 
458 aa  129  7.000000000000001e-29  Ehrlichia chaffeensis str. Arkansas  Bacteria  normal  n/a   
 
 
-
 
NC_011145  AnaeK_3557  response regulator receiver modulated diguanylate cyclase  26.64 
 
 
322 aa  129  8.000000000000001e-29  Anaeromyxobacter sp. K  Bacteria  normal  0.457648  n/a   
 
 
-
 
NC_011884  Cyan7425_3210  response regulator receiver modulated diguanylate cyclase  28.31 
 
 
337 aa  128  1.0000000000000001e-28  Cyanothece sp. PCC 7425  Bacteria  normal  0.32327  normal  0.712325 
 
 
-
 
NC_008700  Sama_0748  response regulator receiver protein  26.25 
 
 
312 aa  127  2.0000000000000002e-28  Shewanella amazonensis SB2B  Bacteria  normal  normal 
 
 
-
 
NC_007517  Gmet_0069  response regulator receiver modulated diguanylate cyclase  25 
 
 
314 aa  127  3e-28  Geobacter metallireducens GS-15  Bacteria  normal  normal  0.840661 
 
 
-
 
NC_007760  Adeh_3473  response regulator receiver modulated diguanylate cyclase  26.54 
 
 
351 aa  127  3e-28  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  n/a   
 
 
-
 
NC_011146  Gbem_1228  response regulator receiver modulated diguanylate cyclase  25.82 
 
 
349 aa  126  4.0000000000000003e-28  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_007908  Rfer_3547  diguanylate cyclase  28.96 
 
 
314 aa  127  4.0000000000000003e-28  Rhodoferax ferrireducens T118  Bacteria  normal  0.928319  n/a   
 
 
-
 
NC_010718  Nther_1974  response regulator receiver modulated diguanylate cyclase  27.16 
 
 
340 aa  126  5e-28  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  normal  0.098619 
 
 
-
 
NC_013216  Dtox_1577  response regulator receiver modulated diguanylate cyclase  24.35 
 
 
314 aa  125  7e-28  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  normal 
 
 
-
 
NC_010424  Daud_1846  response regulator receiver modulated diguanylate cyclase  22.9 
 
 
314 aa  125  8.000000000000001e-28  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  n/a   
 
 
-
 
NC_014248  Aazo_5066  response regulator receiver modulated diguanylate cyclase  28.75 
 
 
338 aa  124  2e-27  'Nostoc azollae' 0708  Bacteria  normal  n/a   
 
 
-
 
NC_009485  BBta_4746  response regulator PleD  27.13 
 
 
466 aa  124  3e-27  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.0979514  normal  0.753316 
 
 
-
 
NC_010814  Glov_3614  response regulator receiver modulated diguanylate cyclase  24.08 
 
 
310 aa  123  3e-27  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_007614  Nmul_A1860  diguanylate cyclase  28.47 
 
 
312 aa  123  4e-27  Nitrosospira multiformis ATCC 25196  Bacteria  normal  n/a   
 
 
-
 
NC_002978  WD0221  response regulator PleD  29.02 
 
 
460 aa  123  5e-27  Wolbachia endosymbiont of Drosophila melanogaster  Bacteria  normal  n/a   
 
 
-
 
NC_008609  Ppro_1341  response regulator receiver modulated diguanylate cyclase  28 
 
 
319 aa  122  9e-27  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_011729  PCC7424_0984  response regulator receiver modulated diguanylate cyclase  27.84 
 
 
353 aa  122  9.999999999999999e-27  Cyanothece sp. PCC 7424  Bacteria  n/a    normal  0.194443 
 
 
-
 
NC_008789  Hhal_0365  response regulator receiver modulated diguanylate cyclase  26.25 
 
 
308 aa  122  9.999999999999999e-27  Halorhodospira halophila SL1  Bacteria  normal  n/a   
 
 
-
 
NC_008228  Patl_3669  diguanylate cyclase  26.07 
 
 
300 aa  122  9.999999999999999e-27  Pseudoalteromonas atlantica T6c  Bacteria  normal  0.0119902  n/a   
 
 
-
 
NC_013216  Dtox_3787  response regulator receiver modulated diguanylate cyclase  26.85 
 
 
344 aa  122  9.999999999999999e-27  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  0.919533  normal  0.90313 
 
 
-
 
NC_009675  Anae109_2257  response regulator receiver modulated diguanylate cyclase  25.25 
 
 
509 aa  120  1.9999999999999998e-26  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  normal  0.0520127 
 
 
-
 
NC_013526  Tter_2192  response regulator receiver modulated diguanylate cyclase  24.41 
 
 
303 aa  120  1.9999999999999998e-26  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_008254  Meso_1348  response regulator PleD  26.23 
 
 
457 aa  121  1.9999999999999998e-26  Chelativorans sp. BNC1  Bacteria  normal  n/a   
 
 
-
 
NC_011769  DvMF_2758  diguanylate cyclase with PAS/PAC sensor  32.52 
 
 
698 aa  120  1.9999999999999998e-26  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_011891  A2cp1_2397  response regulator receiver modulated diguanylate cyclase  25 
 
 
434 aa  120  3e-26  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  0.593336  n/a   
 
 
-
 
NC_011145  AnaeK_2309  response regulator receiver modulated diguanylate cyclase  25 
 
 
434 aa  120  3e-26  Anaeromyxobacter sp. K  Bacteria  normal  0.484645  n/a   
 
 
-
 
NC_008346  Swol_0600  response regulator receiver protein  25.5 
 
 
301 aa  120  3e-26  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  normal  n/a   
 
 
-
 
NC_002939  GSU2313  response regulator  24.92 
 
 
301 aa  120  3.9999999999999996e-26  Geobacter sulfurreducens PCA  Bacteria  normal  0.483613  n/a   
 
 
-
 
NC_007614  Nmul_A2693  diguanylate cyclase  23.47 
 
 
302 aa  120  3.9999999999999996e-26  Nitrosospira multiformis ATCC 25196  Bacteria  normal  n/a   
 
 
-
 
NC_009523  RoseRS_3816  diguanylate cyclase with PAS/PAC sensor  35.09 
 
 
797 aa  119  4.9999999999999996e-26  Roseiflexus sp. RS-1  Bacteria  normal  0.250791  normal  0.392847 
 
 
-
 
NC_002939  GSU1643  GGDEF/response regulator receiver domain-containing protein  22.11 
 
 
316 aa  118  9.999999999999999e-26  Geobacter sulfurreducens PCA  Bacteria  normal  0.176359  n/a   
 
 
-
 
NC_009767  Rcas_0995  diguanylate cyclase with GAF sensor  31.98 
 
 
792 aa  118  9.999999999999999e-26  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.37011  normal 
 
 
-
 
NC_007760  Adeh_1556  response regulator receiver modulated diguanylate cyclase  24.83 
 
 
300 aa  119  9.999999999999999e-26  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  n/a   
 
 
-
 
NC_010524  Lcho_3544  response regulator receiver modulated diguanylate cyclase  25.84 
 
 
322 aa  118  9.999999999999999e-26  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  0.0106122 
 
 
-
 
NC_008700  Sama_0065  response regulator receiver protein  25.5 
 
 
305 aa  118  9.999999999999999e-26  Shewanella amazonensis SB2B  Bacteria  normal  normal 
 
 
-
 
NC_002939  GSU3376  GGDEF/response regulator receiver domain-containing protein  25.49 
 
 
308 aa  117  1.9999999999999998e-25  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_012560  Avin_29300  Response regulator  26 
 
 
310 aa  117  1.9999999999999998e-25  Azotobacter vinelandii DJ  Bacteria  normal  n/a   
 
 
-
 
NC_007406  Nwi_1432  response regulator PleD  27.18 
 
 
457 aa  117  1.9999999999999998e-25  Nitrobacter winogradskyi Nb-255  Bacteria  normal  normal 
 
 
-
 
NC_011663  Sbal223_4132  response regulator receiver modulated diguanylate cyclase  27.12 
 
 
310 aa  117  1.9999999999999998e-25  Shewanella baltica OS223  Bacteria  normal  normal 
 
 
-
 
NC_009636  Smed_0926  response regulator PleD  25.98 
 
 
455 aa  117  1.9999999999999998e-25  Sinorhizobium medicae WSM419  Bacteria  normal  normal  0.773886 
 
 
-
 
NC_007778  RPB_2413  response regulator PleD  29.46 
 
 
457 aa  117  1.9999999999999998e-25  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.592932  normal  0.173821 
 
 
-
 
NC_008347  Mmar10_0119  response regulator receiver modulated diguanylate cyclase  23.82 
 
 
324 aa  117  3e-25  Maricaulis maris MCS10  Bacteria  normal  0.969085  normal 
 
 
-
 
NC_007958  RPD_3038  response regulator PleD  29.46 
 
 
457 aa  117  3e-25  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.372566  normal  0.319547 
 
 
-
 
NC_004311  BRA0610  response regulator PleD  26.17 
 
 
461 aa  116  3.9999999999999997e-25  Brucella suis 1330  Bacteria  normal  0.961713  n/a   
 
 
-
 
NC_013173  Dbac_1483  response regulator receiver modulated diguanylate cyclase  24.63 
 
 
335 aa  116  5e-25  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.882912  n/a   
 
 
-
 
NC_009997  Sbal195_4336  response regulator receiver modulated diguanylate cyclase  25.74 
 
 
310 aa  116  6e-25  Shewanella baltica OS195  Bacteria  normal  normal 
 
 
-
 
NC_011662  Tmz1t_3851  response regulator receiver modulated diguanylate cyclase  21.77 
 
 
634 aa  116  6e-25  Thauera sp. MZ1T  Bacteria  normal  0.0571122  n/a   
 
 
-
 
NC_012918  GM21_2951  response regulator receiver modulated diguanylate cyclase  25.29 
 
 
306 aa  115  7.999999999999999e-25  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_011146  Gbem_1332  response regulator receiver modulated diguanylate cyclase  24.9 
 
 
306 aa  115  7.999999999999999e-25  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_007964  Nham_2442  response regulator PleD  27.72 
 
 
457 aa  115  7.999999999999999e-25  Nitrobacter hamburgensis X14  Bacteria  normal  0.696702  n/a   
 
 
-
 
NC_008577  Shewana3_4015  response regulator receiver modulated diguanylate cyclase  26.76 
 
 
315 aa  115  1.0000000000000001e-24  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_007005  Psyr_2939  GGDEF  27.8 
 
 
318 aa  115  1.0000000000000001e-24  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.417006  normal 
 
 
-
 
NC_009668  Oant_3677  response regulator PleD  26.03 
 
 
461 aa  115  1.0000000000000001e-24  Ochrobactrum anthropi ATCC 49188  Bacteria  decreased coverage  0.00345303  n/a   
 
 
-
 
NC_013422  Hneap_0133  response regulator receiver modulated diguanylate cyclase  24.16 
 
 
461 aa  115  1.0000000000000001e-24  Halothiobacillus neapolitanus c2  Bacteria  normal  n/a   
 
 
-
 
NC_009675  Anae109_3583  response regulator receiver modulated diguanylate cyclase  24.27 
 
 
322 aa  114  2.0000000000000002e-24  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  hitchhiker  0.000864033 
 
 
-
 
NC_011004  Rpal_3541  response regulator PleD  28.68 
 
 
457 aa  114  2.0000000000000002e-24  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_009665  Shew185_4204  response regulator receiver modulated diguanylate cyclase  26.4 
 
 
310 aa  114  2.0000000000000002e-24  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_008228  Patl_0265  diguanylate cyclase  28.74 
 
 
310 aa  114  2.0000000000000002e-24  Pseudoalteromonas atlantica T6c  Bacteria  normal  0.021653  n/a   
 
 
-
 
NC_011831  Cagg_1830  response regulator receiver modulated diguanylate cyclase  24.58 
 
 
941 aa  114  3e-24  Chloroflexus aggregans DSM 9485  Bacteria  normal  normal 
 
 
-
 
NC_011894  Mnod_7417  response regulator receiver modulated diguanylate cyclase  23.67 
 
 
457 aa  113  4.0000000000000004e-24  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.196799  n/a   
 
 
-
 
NC_007298  Daro_0709  response regulator receiver modulated diguanylate cyclase  23.78 
 
 
322 aa  113  4.0000000000000004e-24  Dechloromonas aromatica RCB  Bacteria  normal  normal  0.169559 
 
 
-
 
NC_007413  Ava_3170  response regulator receiver modulated diguanylate cyclase  26.23 
 
 
344 aa  113  4.0000000000000004e-24  Anabaena variabilis ATCC 29413  Bacteria  normal  normal  0.103544 
 
 
-
 
NC_002939  GSU3350  sensor histidine kinase/GGDEF domain-containing protein  23.03 
 
 
565 aa  113  5e-24  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_011989  Avi_1750  response regulator PleD  26.48 
 
 
457 aa  113  5e-24  Agrobacterium vitis S4  Bacteria  normal  0.263569  n/a   
 
 
-
 
NC_013161  Cyan8802_0849  response regulator receiver modulated diguanylate cyclase/phosphodiesterase  26.75 
 
 
593 aa  112  7.000000000000001e-24  Cyanothece sp. PCC 8802  Bacteria  normal  0.386146  normal 
 
 
-
 
NC_011726  PCC8801_0820  response regulator receiver modulated diguanylate cyclase/phosphodiesterase  26.75 
 
 
593 aa  112  7.000000000000001e-24  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_012880  Dd703_3123  response regulator receiver modulated diguanylate cyclase  26.09 
 
 
312 aa  112  9e-24  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_009654  Mmwyl1_0135  response regulator receiver modulated diguanylate cyclase  29.77 
 
 
306 aa  111  1.0000000000000001e-23  Marinomonas sp. MWYL1  Bacteria  normal  normal  0.248217 
 
 
-
 
NC_009504  BOV_A0575  response regulator PleD  26.17 
 
 
456 aa  112  1.0000000000000001e-23  Brucella ovis ATCC 25840  Bacteria  normal  n/a   
 
 
-
 
NC_011369  Rleg2_1290  response regulator PleD  25.98 
 
 
457 aa  112  1.0000000000000001e-23  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.0138689  hitchhiker  0.00259394 
 
 
-
 
NC_007484  Noc_1271  hybrid signal transduction histidine kinase and diguanylate cyclase/phosphodiesterase  26.62 
 
 
1499 aa  111  1.0000000000000001e-23  Nitrosococcus oceani ATCC 19707  Bacteria  normal  0.422796  n/a   
 
 
-
 
NC_011138  MADE_00724  putative response regulator  26.26 
 
 
329 aa  112  1.0000000000000001e-23  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  n/a   
 
 
-
 
NC_008347  Mmar10_1277  response regulator receiver modulated diguanylate cyclase  23.81 
 
 
454 aa  111  1.0000000000000001e-23  Maricaulis maris MCS10  Bacteria  normal  0.410696  normal  0.0388481 
 
 
-
 
NC_013739  Cwoe_3139  response regulator receiver modulated diguanylate cyclase  22.15 
 
 
676 aa  111  1.0000000000000001e-23  Conexibacter woesei DSM 14684  Bacteria  normal  normal  0.990746 
 
 
-
 
NC_007778  RPB_2521  diguanylate cyclase  30.68 
 
 
350 aa  112  1.0000000000000001e-23  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal  0.848783 
 
 
-
 
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