Gene Hneap_0133 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHneap_0133 
Symbol 
ID8533247 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothiobacillus neapolitanus c2 
KingdomBacteria 
Replicon accessionNC_013422 
Strand
Start bp126577 
End bp127962 
Gene Length1386 bp 
Protein Length461 aa 
Translation table11 
GC content61% 
IMG OID646382511 
Productresponse regulator receiver modulated diguanylate cyclase 
Protein accessionYP_003262044 
Protein GI261854761 
COG category[T] Signal transduction mechanisms 
COG ID[COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain 
TIGRFAM ID[TIGR00254] diguanylate cyclase (GGDEF) domain 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCGACA CCCACCCTTG CGACGCCCAC ATCCGTCACG ACCTGCGCAC ACCGCTCAAT 
CACATGATCG GCTACACGGA AATGCTGCTG GACGACCTGC CGCCCACGTG CAACGACCTG
CTTTCTCCTC GCCTCAAGAC GCTGCTCGAT GATGCCTATC GGATGCTGGA GACCATCAAC
CGCCCCGCGC CGATGTCCAG CGGGCATTTC GATGGCCTGT TTCCGGATTG GCGAGCGAAA
ATGGCCTTAA TCGAAGCGGA CTTCAACGGC CTGAAGTCCA CGATCGAAAA TGCCTGGCAG
GAAGCCTGCC CCGATGTCGA AAAAATCGGT TCGGCGATCG GCAACATGCG CGCTTTACTC
GAATCGCTCA GCGCAAAACC CTCTATCGAT CTCGGCGACG CACGCAGTCA GCAAAACGCA
CGCGAAACAG CCACCCATGC CACAGGCGGC AGTGGCCATG CCGGCGGTCA TTTGCTCATT
GTCGACGACC GCCAGGAAAA TCTCGAACTG ATGCAGCGCC GCCTGATCCG CGAAGGCTAC
CGCGTCACCG TCAGCAATTC AGGACGGGAA GCGCTTGACC GACTAGAATC CGAGCAGTTT
GACGTCATCC TGCTCGACTG GCTCATGCCC GACATGAGCG GCACGGAAGT GCTGGCAAAG
ATCCGCAGCA AATCGTCTGC CCACGAACAG CCCGTCATCG TGGTAACAGC GCGACACGGC
TCGGAGACCA TCGTCGATGC GCTCACCCAG GGCGCCAACG ACTATCTGGC CAAGCCGCTG
GACTTCCCGG TGGCACTGGC GCGTATCGCG ACACAGGTCT ATCTGCGCCG GGTGACCCAG
CAACTGGCCG ATGCGAACCG ACAACTCAAG CAGTTCTCTT ATATCGACGG TCTCACGGCG
ATTGCCAACC GTCGCAAGTT CGACGAATAC CTGATGACAA CATGGCGCCG CGCGCAGCAG
GAAGGCGCGC CCGTCTCGCT GATCTTGATT GATGTCGATT ACTTCAAGCG CTACAACGAT
TCGCTGGGGC ACGAAGCCGG TGACCACGCA CTGATGCGCG TCGCCAAGGC GGTCAGTTCC
AGCCTGTATC GCGTCAAGGA TCTGGCCGCC CGCTACGGCG GTGAGGAATT CGCCGTCATC
CTGCCAGAAA CCGAACTGGC CGATGCACTC AGTGTTGCCG AACGCGTCCG CAGCGCGGTC
ATGTCGCTGG AACTGCCGCA CCCGGACAGC ACCGTCATGC CCGTTGTAAC GGCAAGCCTG
GGCGTGGGCG AATGGCGCCC CACCGCCTTC TGCGAACCCA GCGCCTTGAT CAACCTGGCA
GACAAAGGGC TATATCAAGC CAAGGCTTCC GGGCGAAATC AGGTCGGCAC GCTGGGGCAA
AATTAG
 
Protein sequence
MADTHPCDAH IRHDLRTPLN HMIGYTEMLL DDLPPTCNDL LSPRLKTLLD DAYRMLETIN 
RPAPMSSGHF DGLFPDWRAK MALIEADFNG LKSTIENAWQ EACPDVEKIG SAIGNMRALL
ESLSAKPSID LGDARSQQNA RETATHATGG SGHAGGHLLI VDDRQENLEL MQRRLIREGY
RVTVSNSGRE ALDRLESEQF DVILLDWLMP DMSGTEVLAK IRSKSSAHEQ PVIVVTARHG
SETIVDALTQ GANDYLAKPL DFPVALARIA TQVYLRRVTQ QLADANRQLK QFSYIDGLTA
IANRRKFDEY LMTTWRRAQQ EGAPVSLILI DVDYFKRYND SLGHEAGDHA LMRVAKAVSS
SLYRVKDLAA RYGGEEFAVI LPETELADAL SVAERVRSAV MSLELPHPDS TVMPVVTASL
GVGEWRPTAF CEPSALINLA DKGLYQAKAS GRNQVGTLGQ N