Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ppro_0115 |
Symbol | |
ID | 4573523 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelobacter propionicus DSM 2379 |
Kingdom | Bacteria |
Replicon accession | NC_008609 |
Strand | - |
Start bp | 131951 |
End bp | 132865 |
Gene Length | 915 bp |
Protein Length | 304 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 639754156 |
Product | response regulator receiver modulated diguanylate cyclase |
Protein accession | YP_899811 |
Protein GI | 118578561 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.113218 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACGCAC GTACACCGGA CCAGGAGTAT TTGAAGAGCC TCACGGTTCT GTATGTGGAG GACGAAGAAG ATGCCCGGGA ACAGTTTACC CTGTTTCTCA GGCGCATCGT GGGGATGCTG ATAGTCGCCA GGGACGGCGC CGAGGGACTG GAGGCCTACC GTACGCACCA TCCCCACATA ATCATAACCG ACATACAGAT GCCGAATATG GACGGACTGA CCATGGCAGG GGAAATCCGC CATTCCGACA GGAACGTGCA GATACTGCTC CTGACCGCCT TTGAGGATGT GGATTACCTG AAACGCTCCA TCAATATCGG CGTTGACAAG TATGTCACCA AGCCGGTCAA CGGTTTTCAA CTCCACGAGA CCCTGCTTGA GTGCGCCCAC AGCCTGCTGG CCGAGGAAGC GCTCCAGTGC GCCGCCCGCA CCGATCACCT CACCGGAATT GCCAACAGAT GGGAGTTCAT CAACCGCTTC AACACTGAAA AAGGGAGGGC GGAACGCCAT GGGACCCCAC TGTCCATCAT TATTGCCGAC ATAGATCACT TCAAGAGCGT CAACGACACC TTCGGCCACA ACGCAGGGGA CAGGGTCCTG AGGAGCGTGG CCAACGCCAT AAGCTCTTCG ATCCGCGTGG AAGATGCCTG CGGACGCTGG GGGGGAGAGG AATTTATGCT GCTGCTGCCG GACACAAACC TGGATGCCGC AGCCAGGGTG GCCGAAAAAC TGCGCCAGGC AGTGAGCGAA CTGTCAATCC CCTGGGAAGG GGAAAGCATA GCAGTTACCC TGAGCATGGG GGTTGGACAG TTCAGGCCGG GCATGACTCT CGACGAGTGC ATACAGCCCG TTGATCATGC CCTGTACCGC GCAAAGACAG GAGGGAGAAA CCGCGTCGAA CTGGCAGCGC CTTGA
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Protein sequence | MNARTPDQEY LKSLTVLYVE DEEDAREQFT LFLRRIVGML IVARDGAEGL EAYRTHHPHI IITDIQMPNM DGLTMAGEIR HSDRNVQILL LTAFEDVDYL KRSINIGVDK YVTKPVNGFQ LHETLLECAH SLLAEEALQC AARTDHLTGI ANRWEFINRF NTEKGRAERH GTPLSIIIAD IDHFKSVNDT FGHNAGDRVL RSVANAISSS IRVEDACGRW GGEEFMLLLP DTNLDAAARV AEKLRQAVSE LSIPWEGESI AVTLSMGVGQ FRPGMTLDEC IQPVDHALYR AKTGGRNRVE LAAP
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