Gene Ppro_0115 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPpro_0115 
Symbol 
ID4573523 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelobacter propionicus DSM 2379 
KingdomBacteria 
Replicon accessionNC_008609 
Strand
Start bp131951 
End bp132865 
Gene Length915 bp 
Protein Length304 aa 
Translation table11 
GC content58% 
IMG OID639754156 
Productresponse regulator receiver modulated diguanylate cyclase 
Protein accessionYP_899811 
Protein GI118578561 
COG category[T] Signal transduction mechanisms 
COG ID[COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain 
TIGRFAM ID[TIGR00254] diguanylate cyclase (GGDEF) domain 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.113218 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACGCAC GTACACCGGA CCAGGAGTAT TTGAAGAGCC TCACGGTTCT GTATGTGGAG 
GACGAAGAAG ATGCCCGGGA ACAGTTTACC CTGTTTCTCA GGCGCATCGT GGGGATGCTG
ATAGTCGCCA GGGACGGCGC CGAGGGACTG GAGGCCTACC GTACGCACCA TCCCCACATA
ATCATAACCG ACATACAGAT GCCGAATATG GACGGACTGA CCATGGCAGG GGAAATCCGC
CATTCCGACA GGAACGTGCA GATACTGCTC CTGACCGCCT TTGAGGATGT GGATTACCTG
AAACGCTCCA TCAATATCGG CGTTGACAAG TATGTCACCA AGCCGGTCAA CGGTTTTCAA
CTCCACGAGA CCCTGCTTGA GTGCGCCCAC AGCCTGCTGG CCGAGGAAGC GCTCCAGTGC
GCCGCCCGCA CCGATCACCT CACCGGAATT GCCAACAGAT GGGAGTTCAT CAACCGCTTC
AACACTGAAA AAGGGAGGGC GGAACGCCAT GGGACCCCAC TGTCCATCAT TATTGCCGAC
ATAGATCACT TCAAGAGCGT CAACGACACC TTCGGCCACA ACGCAGGGGA CAGGGTCCTG
AGGAGCGTGG CCAACGCCAT AAGCTCTTCG ATCCGCGTGG AAGATGCCTG CGGACGCTGG
GGGGGAGAGG AATTTATGCT GCTGCTGCCG GACACAAACC TGGATGCCGC AGCCAGGGTG
GCCGAAAAAC TGCGCCAGGC AGTGAGCGAA CTGTCAATCC CCTGGGAAGG GGAAAGCATA
GCAGTTACCC TGAGCATGGG GGTTGGACAG TTCAGGCCGG GCATGACTCT CGACGAGTGC
ATACAGCCCG TTGATCATGC CCTGTACCGC GCAAAGACAG GAGGGAGAAA CCGCGTCGAA
CTGGCAGCGC CTTGA
 
Protein sequence
MNARTPDQEY LKSLTVLYVE DEEDAREQFT LFLRRIVGML IVARDGAEGL EAYRTHHPHI 
IITDIQMPNM DGLTMAGEIR HSDRNVQILL LTAFEDVDYL KRSINIGVDK YVTKPVNGFQ
LHETLLECAH SLLAEEALQC AARTDHLTGI ANRWEFINRF NTEKGRAERH GTPLSIIIAD
IDHFKSVNDT FGHNAGDRVL RSVANAISSS IRVEDACGRW GGEEFMLLLP DTNLDAAARV
AEKLRQAVSE LSIPWEGESI AVTLSMGVGQ FRPGMTLDEC IQPVDHALYR AKTGGRNRVE
LAAP