Gene Tmz1t_3851 details

Gene Information

• Locus tag: Tmz1t_3851
• ID: 7874093
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Thauera sp. MZ1T
• Kingdom: Bacteria
• Replicon accession: NC_011662
• Strand: +
• Start bp: 4249339
• End bp: 4251243
• Gene Length: 1905 bp
• Protein Length: 634 aa
• Translation table: 11
• GC content: 70%
• IMG OID: 643700793
• Product: response regulator receiver modulated diguanylate cyclase
• Protein accession: YP_002890817
• Protein GI: 237654503
• COG category: [T] Signal transduction mechanisms
• COG ID: [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain
• TIGRFAM ID: [TIGR00254] diguanylate cyclase (GGDEF) domain

Plasmid Coverage information

• Num covering plasmid clones: 9
• Plasmid unclonability p-value: 0.0571122
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAAACCC TCGAACACAT TCCCCTGAAC GGCGAACTCC CCAGTCCGAA AGGAGTCGCG 
CTGGCGATCC TCGAACTGTG CCGCAAGGAC GACGCCACGA TCGCCGAAGT GGCGCGCATC 
GCGCAGACCG ACCCGGCGCT GGCGAGCCGC CTGATTCGCC AGGCCAACTC GGCGGCGCAC 
GGCGGCGGGC GACCGGTGGC CTCGGTCACC GAGGCAATCA TGCGCCTGGG TATGGGCACG 
GTGCGCAACC TCGCGCTCGG CTTCTCGTTG GTGGACCAAT ACCAGAACGG GCCCTGCGGA 
CAATTCGACT ACCAGGGCTT CTGGTCGCAC TCGCTGCTGA TGGGGCTGGC GATGCAGAAG 
TTCAGCAACA TGACGGGGGC CGGCGCGAGC GAGGAGCTCT TCGCCTGCGG CCTGCTCGCC 
CAGGTGGGCC GGCTCTCGCT CGCCACCGTC TATCCCGTCG AGTACGGCCG CCTGCTCGAC 
GGCCAGGACG GTGTGGCGCG CAACCTGGTG GCGCTCGAGC AGGAGCACCT GCAGACCGAC 
CACAACGAGC TCACCGCCGC GCTGCTCGGC GAGTGGGGCA TCCCCGGCGC GCTGATCGAG 
CCGATCTACC ACCACGAGGA GCCGGAGCAC TCCGGCTTCT CCACCGGCTC GCGCCCCTAC 
CAGCTCGTGC ACCTGTTCTA CCTCGCCCGC CGCGTCGCCG ACCTCGGGCT GGCCGGCGAG 
AACGAGCGCA ACGCCTGCAC CGCCGAATTG CTGCTGCTCG GGGGCAGGAT CGGCCTCGAC 
GCCGAGCAGC TCGGCGCCAC GGTGGACGAC CTGGTGCAGC AGTGGCGCAC TTGGGGCGAG 
CTGCTGCGCG TGCCGGCCTC GGCGCTGCCC TCGTTCGCGC ACATGTCGGC GGCGCACGCG 
ATGCGCGACG AGAAGAGCGA TGGCGCGGCG GCGCTGCGCG TGCTGCTGGT CGACGACGAC 
CCCACCACGC GCTGCATGAT GGAGGGCGTG CTGTCCGGGG CGCTCGGCCA CGCGGTGGTG 
TGCGCCAACA ACGGTCGCGA GGCGCTTGCG CTGGCGGTCG AGACCCAGCC GCAGATCGTC 
GTCACCGACT GGATGATGCC GGGCATGGAC GGGCTGGACC TCGCGCGTGC GCTGCGCGCG 
ACCGAGTGGG GGCAGACCAT GTACCTGATC ATGCTCACCG GGCATGAAAA CGAGGACGAG 
GTGAGCGAGG CCTTCGAGGC CGGGGTGGAC GATTTCCTGG TGAAGCCGGT CAACGTGCGC 
ACCCTGCGCG CGCGTCTGCG CGCCGCCCGG CACTACGTGC AGCTGCTCGA GGCGTGGGAG 
CGCGACCGTG CCCAGCTCAA GCAGTTCGCG GCCGAGCTGG CGATCAGCAA CCGCCGCCTC 
GCCCACGCGG CGATGACCGA CCTGCTCACC AACCTGCCCA ACCGCCGCTC GGGCATGAAC 
GCGCTCGCCA AGGCCTGGGC CGCCTCCAGC CGCTTCGAAC AGCCGCTGTC GGTGATGATG 
CTCGACATCG ACCACTTCAA GCGCATCAAC GACAGCCACG GCCACGCGGT GGGCGACACC 
GTGCTGCGCG ACGTCGCCCA GGCCATCCAG CAGTCGGCGC GCAAGGACGA CAGCATGTGC 
CGCATGGGTG GCGAGGAATT CCTCGTGATC TGCCCGAACA CCGACCTCAA GGCGGCGGTC 
CAGGCCGCCG AGCGCCTGCG CCGCATGGTC GAGCGCCTGC GCATCCAGGC CGGCGAAACG 
GAAATACAGA CCTCGGTGAG CATCGGCGTG GCCACCCGCG AGGTCGGCAT GACCGAGACC 
GACGCCCTCG TCAATGCCGC CGATCGCGCG CTCTACCGCG CCAAGCAAGC CGGCCGCAAC 
CGCAGCTGCG TGGTGGTGCA GGGGCAGATG CGGTGCTTTC CGTGA 

 

Protein sequence

MKTLEHIPLN GELPSPKGVA LAILELCRKD DATIAEVARI AQTDPALASR LIRQANSAAH 
GGGRPVASVT EAIMRLGMGT VRNLALGFSL VDQYQNGPCG QFDYQGFWSH SLLMGLAMQK 
FSNMTGAGAS EELFACGLLA QVGRLSLATV YPVEYGRLLD GQDGVARNLV ALEQEHLQTD 
HNELTAALLG EWGIPGALIE PIYHHEEPEH SGFSTGSRPY QLVHLFYLAR RVADLGLAGE 
NERNACTAEL LLLGGRIGLD AEQLGATVDD LVQQWRTWGE LLRVPASALP SFAHMSAAHA 
MRDEKSDGAA ALRVLLVDDD PTTRCMMEGV LSGALGHAVV CANNGREALA LAVETQPQIV 
VTDWMMPGMD GLDLARALRA TEWGQTMYLI MLTGHENEDE VSEAFEAGVD DFLVKPVNVR 
TLRARLRAAR HYVQLLEAWE RDRAQLKQFA AELAISNRRL AHAAMTDLLT NLPNRRSGMN 
ALAKAWAASS RFEQPLSVMM LDIDHFKRIN DSHGHAVGDT VLRDVAQAIQ QSARKDDSMC 
RMGGEEFLVI CPNTDLKAAV QAAERLRRMV ERLRIQAGET EIQTSVSIGV ATREVGMTET 
DALVNAADRA LYRAKQAGRN RSCVVVQGQM RCFP