More than 300 homologs were found in PanDaTox collection
for query gene Mmwyl1_0135 on replicon NC_009654
Organism: Marinomonas sp. MWYL1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009654  Mmwyl1_0135  response regulator receiver modulated diguanylate cyclase  100 
 
 
306 aa  625  1e-178  Marinomonas sp. MWYL1  Bacteria  normal  normal  0.248217 
 
 
-
 
NC_009654  Mmwyl1_1645  response regulator receiver modulated diguanylate cyclase  57.53 
 
 
308 aa  338  5e-92  Marinomonas sp. MWYL1  Bacteria  normal  normal  0.456967 
 
 
-
 
NC_010506  Swoo_0828  response regulator receiver modulated diguanylate cyclase  43.43 
 
 
324 aa  236  3e-61  Shewanella woodyi ATCC 51908  Bacteria  normal  normal 
 
 
-
 
NC_008609  Ppro_1341  response regulator receiver modulated diguanylate cyclase  39.86 
 
 
319 aa  236  4e-61  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_008789  Hhal_0365  response regulator receiver modulated diguanylate cyclase  42.62 
 
 
308 aa  236  4e-61  Halorhodospira halophila SL1  Bacteria  normal  n/a   
 
 
-
 
NC_011663  Sbal223_4132  response regulator receiver modulated diguanylate cyclase  39.46 
 
 
310 aa  233  3e-60  Shewanella baltica OS223  Bacteria  normal  normal 
 
 
-
 
NC_009665  Shew185_4204  response regulator receiver modulated diguanylate cyclase  39.45 
 
 
310 aa  231  1e-59  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_009997  Sbal195_4336  response regulator receiver modulated diguanylate cyclase  39.12 
 
 
310 aa  230  3e-59  Shewanella baltica OS195  Bacteria  normal  normal 
 
 
-
 
NC_012560  Avin_29300  Response regulator  39.18 
 
 
310 aa  229  4e-59  Azotobacter vinelandii DJ  Bacteria  normal  n/a   
 
 
-
 
NC_010524  Lcho_3544  response regulator receiver modulated diguanylate cyclase  42.07 
 
 
322 aa  226  3e-58  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  0.0106122 
 
 
-
 
NC_008577  Shewana3_4015  response regulator receiver modulated diguanylate cyclase  39.45 
 
 
315 aa  225  6e-58  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_007954  Sden_1684  GGDEF domain-containing protein  38.57 
 
 
323 aa  225  8e-58  Shewanella denitrificans OS217  Bacteria  normal  n/a   
 
 
-
 
NC_013173  Dbac_2032  response regulator receiver modulated diguanylate cyclase  39.74 
 
 
310 aa  224  2e-57  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_010002  Daci_1192  response regulator receiver modulated diguanylate cyclase  37.41 
 
 
316 aa  224  2e-57  Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
NC_008576  Mmc1_3528  response regulator receiver modulated diguanylate cyclase  39.46 
 
 
310 aa  223  4e-57  Magnetococcus sp. MC-1  Bacteria  normal  normal 
 
 
-
 
NC_012880  Dd703_3123  response regulator receiver modulated diguanylate cyclase  38.05 
 
 
312 aa  223  4e-57  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_007005  Psyr_2939  GGDEF  39.42 
 
 
318 aa  220  3e-56  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.417006  normal 
 
 
-
 
NC_010814  Glov_2955  response regulator receiver modulated diguanylate cyclase  40 
 
 
308 aa  217  2e-55  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_011884  Cyan7425_3210  response regulator receiver modulated diguanylate cyclase  36.53 
 
 
337 aa  216  2.9999999999999998e-55  Cyanothece sp. PCC 7425  Bacteria  normal  0.32327  normal  0.712325 
 
 
-
 
NC_011830  Dhaf_1561  response regulator receiver modulated diguanylate cyclase  41.72 
 
 
455 aa  216  4e-55  Desulfitobacterium hafniense DCB-2  Bacteria  hitchhiker  0.0000000734361  n/a   
 
 
-
 
NC_007413  Ava_1030  response regulator receiver modulated diguanylate cyclase  40.2 
 
 
330 aa  212  4.9999999999999996e-54  Anabaena variabilis ATCC 29413  Bacteria  normal  normal  0.33399 
 
 
-
 
NC_010002  Daci_1507  response regulator receiver modulated diguanylate cyclase  38.18 
 
 
308 aa  209  4e-53  Delftia acidovorans SPH-1  Bacteria  normal  normal  0.914031 
 
 
-
 
NC_008345  Sfri_2812  diguanylate cyclase  36.55 
 
 
315 aa  209  4e-53  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_008228  Patl_2089  diguanylate cyclase  36.33 
 
 
306 aa  208  1e-52  Pseudoalteromonas atlantica T6c  Bacteria  normal  n/a   
 
 
-
 
NC_011146  Gbem_1228  response regulator receiver modulated diguanylate cyclase  41.83 
 
 
349 aa  207  2e-52  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_010506  Swoo_1513  response regulator receiver modulated diguanylate cyclase  40.67 
 
 
301 aa  204  1e-51  Shewanella woodyi ATCC 51908  Bacteria  normal  normal  0.0153071 
 
 
-
 
NC_013173  Dbac_0019  response regulator receiver modulated diguanylate cyclase  36.89 
 
 
341 aa  201  9.999999999999999e-51  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.0416556  n/a   
 
 
-
 
NC_009831  Ssed_1382  response regulator receiver protein  41.31 
 
 
302 aa  199  3.9999999999999996e-50  Shewanella sediminis HAW-EB3  Bacteria  normal  normal 
 
 
-
 
NC_008228  Patl_3669  diguanylate cyclase  36.21 
 
 
300 aa  198  1.0000000000000001e-49  Pseudoalteromonas atlantica T6c  Bacteria  normal  0.0119902  n/a   
 
 
-
 
NC_008700  Sama_0748  response regulator receiver protein  35.42 
 
 
312 aa  197  2.0000000000000003e-49  Shewanella amazonensis SB2B  Bacteria  normal  normal 
 
 
-
 
NC_007575  Suden_0218  diguanylate cyclase  40.89 
 
 
304 aa  196  3e-49  Sulfurimonas denitrificans DSM 1251  Bacteria  normal  n/a   
 
 
-
 
NC_008228  Patl_4177  diguanylate cyclase  36.21 
 
 
347 aa  196  3e-49  Pseudoalteromonas atlantica T6c  Bacteria  normal  n/a   
 
 
-
 
NC_011729  PCC7424_0984  response regulator receiver modulated diguanylate cyclase  34.02 
 
 
353 aa  194  2e-48  Cyanothece sp. PCC 7424  Bacteria  n/a    normal  0.194443 
 
 
-
 
NC_008700  Sama_0065  response regulator receiver protein  38.74 
 
 
305 aa  193  4e-48  Shewanella amazonensis SB2B  Bacteria  normal  normal 
 
 
-
 
NC_014248  Aazo_5066  response regulator receiver modulated diguanylate cyclase  35.15 
 
 
338 aa  191  1e-47  'Nostoc azollae' 0708  Bacteria  normal  n/a   
 
 
-
 
NC_009092  Shew_3790  response regulator receiver modulated diguanylate cyclase  38.49 
 
 
300 aa  188  9e-47  Shewanella loihica PV-4  Bacteria  normal  normal 
 
 
-
 
NC_007298  Daro_1597  response regulator receiver modulated diguanylate cyclase  36.71 
 
 
313 aa  184  1.0000000000000001e-45  Dechloromonas aromatica RCB  Bacteria  normal  normal 
 
 
-
 
NC_013216  Dtox_1577  response regulator receiver modulated diguanylate cyclase  35.69 
 
 
314 aa  183  3e-45  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  normal 
 
 
-
 
NC_007413  Ava_3170  response regulator receiver modulated diguanylate cyclase  34.78 
 
 
344 aa  183  4.0000000000000006e-45  Anabaena variabilis ATCC 29413  Bacteria  normal  normal  0.103544 
 
 
-
 
NC_007484  Noc_0847  two component diguanylate cyclase  35.69 
 
 
327 aa  183  4.0000000000000006e-45  Nitrosococcus oceani ATCC 19707  Bacteria  normal  n/a   
 
 
-
 
NC_013216  Dtox_3787  response regulator receiver modulated diguanylate cyclase  35.28 
 
 
344 aa  181  1e-44  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  0.919533  normal  0.90313 
 
 
-
 
NC_009831  Ssed_1645  hypothetical protein  36 
 
 
344 aa  179  4e-44  Shewanella sediminis HAW-EB3  Bacteria  normal  0.176846  normal 
 
 
-
 
NC_014248  Aazo_1477  response regulator receiver modulated diguanylate cyclase  36.72 
 
 
317 aa  179  4e-44  'Nostoc azollae' 0708  Bacteria  normal  n/a   
 
 
-
 
NC_009483  Gura_0195  response regulator receiver modulated diguanylate cyclase  39.47 
 
 
309 aa  178  9e-44  Geobacter uraniireducens Rf4  Bacteria  normal  0.0106599  n/a   
 
 
-
 
NC_011728  BbuZS7_0421  response regulatory protein  36.86 
 
 
305 aa  177  2e-43  Borrelia burgdorferi ZS7  Bacteria  normal  0.972098  n/a   
 
 
-
 
NC_011145  AnaeK_2309  response regulator receiver modulated diguanylate cyclase  35.74 
 
 
434 aa  175  7e-43  Anaeromyxobacter sp. K  Bacteria  normal  0.484645  n/a   
 
 
-
 
NC_011313  VSAL_II0052  response regulator protein  37.46 
 
 
299 aa  175  7e-43  Aliivibrio salmonicida LFI1238  Bacteria  normal  0.189873  n/a   
 
 
-
 
NC_011891  A2cp1_2397  response regulator receiver modulated diguanylate cyclase  35.74 
 
 
434 aa  175  8e-43  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  0.593336  n/a   
 
 
-
 
NC_007912  Sde_2383  response regulator receiver modulated diguanylate cyclase  32.77 
 
 
434 aa  175  9.999999999999999e-43  Saccharophagus degradans 2-40  Bacteria  normal  hitchhiker  0.00665942 
 
 
-
 
NC_011729  PCC7424_0178  response regulator receiver modulated diguanylate cyclase  37.42 
 
 
322 aa  174  1.9999999999999998e-42  Cyanothece sp. PCC 7424  Bacteria  n/a    normal  0.895619 
 
 
-
 
NC_013422  Hneap_0133  response regulator receiver modulated diguanylate cyclase  35.23 
 
 
461 aa  174  1.9999999999999998e-42  Halothiobacillus neapolitanus c2  Bacteria  normal  n/a   
 
 
-
 
NC_010814  Glov_3614  response regulator receiver modulated diguanylate cyclase  39.2 
 
 
310 aa  174  1.9999999999999998e-42  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_009675  Anae109_2257  response regulator receiver modulated diguanylate cyclase  34.59 
 
 
509 aa  173  1.9999999999999998e-42  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  normal  0.0520127 
 
 
-
 
NC_011831  Cagg_1006  response regulator receiver modulated diguanylate cyclase  34.43 
 
 
312 aa  174  1.9999999999999998e-42  Chloroflexus aggregans DSM 9485  Bacteria  normal  normal 
 
 
-
 
NC_007974  Rmet_3967  putative response regulator of a two-component system  35.56 
 
 
335 aa  174  1.9999999999999998e-42  Cupriavidus metallidurans CH34  Bacteria  hitchhiker  0.000645274  normal  0.0110626 
 
 
-
 
NC_011146  Gbem_1332  response regulator receiver modulated diguanylate cyclase  36.77 
 
 
306 aa  173  2.9999999999999996e-42  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_2951  response regulator receiver modulated diguanylate cyclase  36.77 
 
 
306 aa  173  2.9999999999999996e-42  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_010718  Nther_1974  response regulator receiver modulated diguanylate cyclase  38.21 
 
 
340 aa  173  2.9999999999999996e-42  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  normal  0.098619 
 
 
-
 
NC_007760  Adeh_1556  response regulator receiver modulated diguanylate cyclase  35.07 
 
 
300 aa  172  5e-42  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  n/a   
 
 
-
 
NC_002939  GSU3376  GGDEF/response regulator receiver domain-containing protein  35.28 
 
 
308 aa  171  2e-41  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_007348  Reut_B3647  response regulator receiver modulated diguanylate cyclase  33.12 
 
 
359 aa  171  2e-41  Ralstonia eutropha JMP134  Bacteria  normal  0.745021  n/a   
 
 
-
 
NC_007517  Gmet_0069  response regulator receiver modulated diguanylate cyclase  37.1 
 
 
314 aa  171  2e-41  Geobacter metallireducens GS-15  Bacteria  normal  normal  0.840661 
 
 
-
 
NC_008709  Ping_0978  response regulator receiver modulated diguanylate cyclase  39.58 
 
 
322 aa  170  3e-41  Psychromonas ingrahamii 37  Bacteria  normal  0.97362  decreased coverage  0.00116316 
 
 
-
 
NC_011138  MADE_02505  putative response regulator  35.59 
 
 
306 aa  169  4e-41  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  n/a   
 
 
-
 
NC_007511  Bcep18194_B2018  response regulator receiver modulated diguanylate cyclase  33.44 
 
 
355 aa  169  6e-41  Burkholderia sp. 383  Bacteria  normal  0.414914  normal  0.602726 
 
 
-
 
NC_007298  Daro_0709  response regulator receiver modulated diguanylate cyclase  31.31 
 
 
322 aa  167  2e-40  Dechloromonas aromatica RCB  Bacteria  normal  normal  0.169559 
 
 
-
 
NC_008463  PA14_16500  two-component response regulator  32.19 
 
 
347 aa  167  2e-40  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.67066  normal 
 
 
-
 
NC_008009  Acid345_3505  response regulator receiver modulated diguanylate cyclase  35.93 
 
 
665 aa  167  2e-40  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  normal 
 
 
-
 
NC_010501  PputW619_4124  response regulator receiver modulated diguanylate cyclase  32.49 
 
 
334 aa  167  2e-40  Pseudomonas putida W619  Bacteria  normal  0.113929  normal 
 
 
-
 
NC_007760  Adeh_3473  response regulator receiver modulated diguanylate cyclase  34.42 
 
 
351 aa  166  4e-40  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  n/a   
 
 
-
 
NC_009512  Pput_4228  response regulator receiver modulated diguanylate cyclase  32.18 
 
 
334 aa  166  4e-40  Pseudomonas putida F1  Bacteria  normal  normal 
 
 
-
 
NC_002947  PP_1494  response regulator/GGDEF domain-containing protein  32.18 
 
 
335 aa  166  5.9999999999999996e-40  Pseudomonas putida KT2440  Bacteria  normal  normal  0.799611 
 
 
-
 
NC_008391  Bamb_3449  diguanylate cyclase  33.86 
 
 
357 aa  166  5.9999999999999996e-40  Burkholderia ambifaria AMMD  Bacteria  normal  normal  0.103484 
 
 
-
 
NC_013739  Cwoe_3139  response regulator receiver modulated diguanylate cyclase  34.92 
 
 
676 aa  165  1.0000000000000001e-39  Conexibacter woesei DSM 14684  Bacteria  normal  normal  0.990746 
 
 
-
 
NC_010552  BamMC406_3956  response regulator receiver modulated diguanylate cyclase  33.54 
 
 
357 aa  164  1.0000000000000001e-39  Burkholderia ambifaria MC40-6  Bacteria  normal  0.892783  normal  0.485051 
 
 
-
 
NC_010086  Bmul_4535  response regulator receiver modulated diguanylate cyclase  33.44 
 
 
345 aa  165  1.0000000000000001e-39  Burkholderia multivorans ATCC 17616  Bacteria  normal  0.0387275  normal  0.636684 
 
 
-
 
NC_010681  Bphyt_3973  response regulator receiver modulated diguanylate cyclase  34.19 
 
 
362 aa  164  1.0000000000000001e-39  Burkholderia phytofirmans PsJN  Bacteria  normal  0.415221  normal 
 
 
-
 
NC_010814  Glov_0963  response regulator receiver modulated diguanylate cyclase  35.88 
 
 
300 aa  164  2.0000000000000002e-39  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_010515  Bcenmc03_3470  response regulator receiver modulated diguanylate cyclase  33.02 
 
 
353 aa  164  2.0000000000000002e-39  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.843913  normal  0.949354 
 
 
-
 
NC_009656  PSPA7_1436  two-component response regulator  32.48 
 
 
327 aa  164  2.0000000000000002e-39  Pseudomonas aeruginosa PA7  Bacteria  normal  0.462819  n/a   
 
 
-
 
NC_008543  Bcen2424_4055  diguanylate cyclase  32.71 
 
 
354 aa  163  3e-39  Burkholderia cenocepacia HI2424  Bacteria  normal  0.33875  normal 
 
 
-
 
NC_008061  Bcen_4311  diguanylate cyclase  32.71 
 
 
354 aa  163  3e-39  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.750548  n/a   
 
 
-
 
NC_010322  PputGB1_1099  response regulator receiver modulated diguanylate cyclase  31.86 
 
 
334 aa  163  4.0000000000000004e-39  Pseudomonas putida GB-1  Bacteria  normal  normal 
 
 
-
 
NC_010002  Daci_5250  response regulator receiver modulated diguanylate cyclase  29.26 
 
 
360 aa  162  6e-39  Delftia acidovorans SPH-1  Bacteria  normal  0.395511  normal  0.949965 
 
 
-
 
NC_011891  A2cp1_3625  response regulator receiver modulated diguanylate cyclase  33.44 
 
 
322 aa  161  1e-38  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_011726  PCC8801_1139  response regulator receiver modulated diguanylate cyclase  34 
 
 
308 aa  161  1e-38  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_013161  Cyan8802_1169  response regulator receiver modulated diguanylate cyclase  34 
 
 
308 aa  161  1e-38  Cyanothece sp. PCC 8802  Bacteria  normal  normal 
 
 
-
 
NC_004578  PSPTO_1499  response regulator/GGDEF domain protein  31.86 
 
 
334 aa  160  2e-38  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_007492  Pfl01_1058  response regulator receiver modulated diguanylate cyclase  31.97 
 
 
333 aa  160  2e-38  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.0856452  normal  0.699737 
 
 
-
 
NC_011145  AnaeK_3557  response regulator receiver modulated diguanylate cyclase  33.77 
 
 
322 aa  160  3e-38  Anaeromyxobacter sp. K  Bacteria  normal  0.457648  n/a   
 
 
-
 
NC_007005  Psyr_1309  GGDEF  31.35 
 
 
334 aa  159  5e-38  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  hitchhiker  0.00365402 
 
 
-
 
NC_010623  Bphy_5389  response regulator receiver modulated diguanylate cyclase  30.35 
 
 
372 aa  159  6e-38  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_013526  Tter_2192  response regulator receiver modulated diguanylate cyclase  32.11 
 
 
303 aa  157  2e-37  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_011992  Dtpsy_2604  response regulator receiver modulated diguanylate cyclase  29.3 
 
 
341 aa  157  2e-37  Acidovorax ebreus TPSY  Bacteria  normal  0.224021  n/a   
 
 
-
 
NC_008782  Ajs_3251  response regulator receiver modulated diguanylate cyclase  29.68 
 
 
341 aa  157  3e-37  Acidovorax sp. JS42  Bacteria  normal  0.61058  normal  0.330404 
 
 
-
 
NC_007912  Sde_2463  response regulator receiver modulated diguanylate cyclase  33.11 
 
 
301 aa  156  4e-37  Saccharophagus degradans 2-40  Bacteria  normal  normal 
 
 
-
 
NC_011726  PCC8801_2041  response regulator receiver modulated diguanylate cyclase  35.43 
 
 
317 aa  155  5.0000000000000005e-37  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_013161  Cyan8802_2067  response regulator receiver modulated diguanylate cyclase  35.43 
 
 
317 aa  155  5.0000000000000005e-37  Cyanothece sp. PCC 8802  Bacteria  normal  normal 
 
 
-
 
NC_012850  Rleg_2407  response regulator receiver modulated diguanylate cyclase  34.11 
 
 
443 aa  150  2e-35  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.0296488 
 
 
-
 
NC_007912  Sde_3005  response regulator receiver modulated diguanylate cyclase  31.67 
 
 
303 aa  150  2e-35  Saccharophagus degradans 2-40  Bacteria  normal  hitchhiker  0.000288968 
 
 
-
 
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