| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_4015 |
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| Symbol | |
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| ID | 4480229 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | - |
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| Start bp | 4820491 |
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| End bp | 4821438 |
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| Gene Length | 948 bp |
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| Protein Length | 315 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 639728630 |
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| Product | response regulator receiver modulated diguanylate cyclase |
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| Protein accession | YP_871638 |
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| Protein GI | 117922446 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 46 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCAGTATT TAAGTGAATT AATGGCGACG CAACAGGCCA CCAAAGGCAA GATTCTGATC
GTGGATGATC AGCCACTGAA TATCAAAATC TTGCATCAAT TGTTCCATGA AGAATATGAG
ATGTTCATGG CGACGAGTGG TGAGCAGGCG CTGCAGGTAT GCCAAAAAAT GCAGCCCGAT
CTGGTGTTAT TAGACATCGA AATGCCTGAG ATGACGGGCT ATGAAGTCTG CCAGCGACTA
AAAGCCGACC CCGCCACCGC CAATATTGGG GTGATCTTTA TTACTGCCCA TTTTGATGAG
ATGGAAGAAG TGAAGGGCTT TCAACTCGGC GCGGTGGATT TTATTCACAA ACCGATCAAC
CCCATCATCA CCAGTGCGCG GGTAAAGAAC CAGTATCTAC TTAAGCGCCA ATCCGATGTA
TTGCATTCCA TCGCCTTGCT CGACAGTTTG ACTGGTGTGG CTAACCGTCG CCAATTCGAG
CAACGCTTAC CCGAAATCTG GCGCCATTGC AGCCGTAATC AGGCGTATTT GTCCGTTATC
ATGCTGGATG TGGACTTTTT TAAACGCTAT AACGATCGCT ATGGTCATCA GGAAGGTGAT
CAATGTTTGC GACTGGTCGC CGATGCCGTT AAAGGTATGT TAAAACGTCC TAACGATCTT
ATCGCCCGTT ACGGTGGCGA GGAGTTTATC TGTATCCTGC CAGAGGCTAA GCTGTCTGGC
GCCATGCGTC TCGCACAGGC GATGGTAGAT GCGGTGCATG CCCTGCATTT AGAGCATCTA
GACTCAGAGT TTGGTGAGGT CACAGTGAGC GCCGGTATTG CCACAATTCA GCCACTCGCC
GAGCAAAGTT GGGAGTCTTT GGTTGAAGTT GCGGATCAGC AGCTATATAT CGCTAAACAT
AATGGCCGTA ATCAAGTCGT TGGTATCGAT ATCGAACCGG CGCAATAA
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| Protein sequence | MQYLSELMAT QQATKGKILI VDDQPLNIKI LHQLFHEEYE MFMATSGEQA LQVCQKMQPD
LVLLDIEMPE MTGYEVCQRL KADPATANIG VIFITAHFDE MEEVKGFQLG AVDFIHKPIN
PIITSARVKN QYLLKRQSDV LHSIALLDSL TGVANRRQFE QRLPEIWRHC SRNQAYLSVI
MLDVDFFKRY NDRYGHQEGD QCLRLVADAV KGMLKRPNDL IARYGGEEFI CILPEAKLSG
AMRLAQAMVD AVHALHLEHL DSEFGEVTVS AGIATIQPLA EQSWESLVEV ADQQLYIAKH
NGRNQVVGID IEPAQ
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