Gene Shewana3_4015 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_4015 
Symbol 
ID4480229 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp4820491 
End bp4821438 
Gene Length948 bp 
Protein Length315 aa 
Translation table11 
GC content49% 
IMG OID639728630 
Productresponse regulator receiver modulated diguanylate cyclase 
Protein accessionYP_871638 
Protein GI117922446 
COG category[T] Signal transduction mechanisms 
COG ID[COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain 
TIGRFAM ID[TIGR00254] diguanylate cyclase (GGDEF) domain 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones46 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCAGTATT TAAGTGAATT AATGGCGACG CAACAGGCCA CCAAAGGCAA GATTCTGATC 
GTGGATGATC AGCCACTGAA TATCAAAATC TTGCATCAAT TGTTCCATGA AGAATATGAG
ATGTTCATGG CGACGAGTGG TGAGCAGGCG CTGCAGGTAT GCCAAAAAAT GCAGCCCGAT
CTGGTGTTAT TAGACATCGA AATGCCTGAG ATGACGGGCT ATGAAGTCTG CCAGCGACTA
AAAGCCGACC CCGCCACCGC CAATATTGGG GTGATCTTTA TTACTGCCCA TTTTGATGAG
ATGGAAGAAG TGAAGGGCTT TCAACTCGGC GCGGTGGATT TTATTCACAA ACCGATCAAC
CCCATCATCA CCAGTGCGCG GGTAAAGAAC CAGTATCTAC TTAAGCGCCA ATCCGATGTA
TTGCATTCCA TCGCCTTGCT CGACAGTTTG ACTGGTGTGG CTAACCGTCG CCAATTCGAG
CAACGCTTAC CCGAAATCTG GCGCCATTGC AGCCGTAATC AGGCGTATTT GTCCGTTATC
ATGCTGGATG TGGACTTTTT TAAACGCTAT AACGATCGCT ATGGTCATCA GGAAGGTGAT
CAATGTTTGC GACTGGTCGC CGATGCCGTT AAAGGTATGT TAAAACGTCC TAACGATCTT
ATCGCCCGTT ACGGTGGCGA GGAGTTTATC TGTATCCTGC CAGAGGCTAA GCTGTCTGGC
GCCATGCGTC TCGCACAGGC GATGGTAGAT GCGGTGCATG CCCTGCATTT AGAGCATCTA
GACTCAGAGT TTGGTGAGGT CACAGTGAGC GCCGGTATTG CCACAATTCA GCCACTCGCC
GAGCAAAGTT GGGAGTCTTT GGTTGAAGTT GCGGATCAGC AGCTATATAT CGCTAAACAT
AATGGCCGTA ATCAAGTCGT TGGTATCGAT ATCGAACCGG CGCAATAA
 
Protein sequence
MQYLSELMAT QQATKGKILI VDDQPLNIKI LHQLFHEEYE MFMATSGEQA LQVCQKMQPD 
LVLLDIEMPE MTGYEVCQRL KADPATANIG VIFITAHFDE MEEVKGFQLG AVDFIHKPIN
PIITSARVKN QYLLKRQSDV LHSIALLDSL TGVANRRQFE QRLPEIWRHC SRNQAYLSVI
MLDVDFFKRY NDRYGHQEGD QCLRLVADAV KGMLKRPNDL IARYGGEEFI CILPEAKLSG
AMRLAQAMVD AVHALHLEHL DSEFGEVTVS AGIATIQPLA EQSWESLVEV ADQQLYIAKH
NGRNQVVGID IEPAQ