Gene Gbem_1332 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGbem_1332 
Symbol 
ID6781319 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter bemidjiensis Bem 
KingdomBacteria 
Replicon accessionNC_011146 
Strand
Start bp1535717 
End bp1536637 
Gene Length921 bp 
Protein Length306 aa 
Translation table11 
GC content60% 
IMG OID642767326 
Productresponse regulator receiver modulated diguanylate cyclase 
Protein accessionYP_002138147 
Protein GI197117720 
COG category[T] Signal transduction mechanisms 
COG ID[COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain 
TIGRFAM ID[TIGR00254] diguanylate cyclase (GGDEF) domain 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCAGCT GTGTGCTCGT GATCGATGAC TCCGCTGCCA TCCGGGAGCA GGTTGTGCGG 
ACGCTCAAGG ATGTCGGACT GTTCGAGGAA TACTGCGAGG CGCGGGACGG GCTCGAAGGC
TTCAAGACGC TGATCGAGTC GAAGGCCGAT CTGGTGATCT GCGACGTCGA CATGCCGCGC
ATGGACGGCT ACAAGTTCCT GCAGCTCGTC GCGTCGAGAC CCGAGTTGCT GGGGCTTCCG
ATCATCATGC TGACCGGCAT GATGGACTTC AACTCAAAAA TTAGGGGGCT GGAGCAGGGG
GCGAGCGATT ATCTCACCAA GCCGTTCGAT TCCGGCGAGC TTGTGGCACG GGTCAAGGTA
CAGCTGAAGA TCAAGTCGCT GCAGGACGAG CTGAAAAAGG CGAACGAACA ATTAAAGAGA
CTCACCAACA TCGATCACCT GACCAACCTC TTCAACCGGC GCTACCTCAC AGAGGTACTC
GAATCGGAAT TCTTCCGCGC CCGGCGCAAC CGGGAGAACC TCTCGCTGGT CATCATCGAC
ATAGACTATT TCAAGAACGT GAACGACACC TACGGCCATC AAAACGGTGA CGTGGTGCTT
GCTTCCGTCG CCGGGCTGGC ACAGAAGCAG TTGCGCGCCT ACGACAGCGC CGCCCGCTAT
GGCGGCGAAG AGTTCGTCCT GGTCCTGCCA GGGACTTCGC TGGAAGGAGG GAAAATGGTG
GCCGAGCGCC TGAGGCAGGC GGTGCTGGAA TTCGCTTTCC CGTCCCCCAT GGAAGATCTC
ACCCTGACCA TCAGCGCCGG CGTGGCGACC TTTCCCTCGC CCAGTATCGA TAACATCGAC
TCCTTGTTCC GCCAGGCCGA CGAGGCGCTG TACCGGGCCA AGCAAACCGG CCGGAACAGG
GTAGAGCTCA TGGACGTCTG A
 
Protein sequence
MSSCVLVIDD SAAIREQVVR TLKDVGLFEE YCEARDGLEG FKTLIESKAD LVICDVDMPR 
MDGYKFLQLV ASRPELLGLP IIMLTGMMDF NSKIRGLEQG ASDYLTKPFD SGELVARVKV
QLKIKSLQDE LKKANEQLKR LTNIDHLTNL FNRRYLTEVL ESEFFRARRN RENLSLVIID
IDYFKNVNDT YGHQNGDVVL ASVAGLAQKQ LRAYDSAARY GGEEFVLVLP GTSLEGGKMV
AERLRQAVLE FAFPSPMEDL TLTISAGVAT FPSPSIDNID SLFRQADEAL YRAKQTGRNR
VELMDV