Gene MADE_00724 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMADE_00724 
Symbol 
ID6777925 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlteromonas macleodii 'Deep ecotype' 
KingdomBacteria 
Replicon accessionNC_011138 
Strand
Start bp761969 
End bp762958 
Gene Length990 bp 
Protein Length329 aa 
Translation table11 
GC content44% 
IMG OID642754158 
Productputative response regulator 
Protein accessionYP_002125034 
Protein GI196155545 
COG category[T] Signal transduction mechanisms 
COG ID[COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain 
TIGRFAM ID[TIGR00254] diguanylate cyclase (GGDEF) domain 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTATATTG AGCAAGTTGG CGAGCGTACT TTAAAAGATT GTAAAGTGCT TATCGTTGAC 
GACCAAGCCA GCAGCAGACT TGTACTGGAA ACATTACTTG AGGACACGGT TCCCTGTACT
TCTGTGAGTT CAGGACAGGA GGCTATTGAG TACTGTAAGT TTCACACGCC TGATTTAATC
TTAATGGACG TGTCAATGCC TGAACTCGAT GGGCATCAAA CCACCGCGCT TCTAAGGAGT
AAGCCTTTAT GCGCTCACAT CCCTATCATT TTTGTTACTT CATCGAGTAC CGATGAAGAA
GAGACTCGGT GCTGGGACTC TGGATGCGTT GATTTTGTGG TGAAACCTGT AAATGCATGT
ACTCTACGGA ACCGAGTGAA ATCACATATT AATCATAAGC TGAGGAACGA CCTGCTCGAA
AAGCTCATTT ATGTAGACAA ACTAACTGGT GCGTACAATC GGCACTACCT TGATGACTAC
CTTCCTCGGC TAGTAAAAGA TGAGCTTCGA ACCTCTACTC CCCTTGCCTT AGTCATATTC
GACATCGATC ATTTCAAACT CTTTAATGAT ATGTATGGCC ATTTAGACGG CGATAGTTGT
TTATGGAAGG TCAGCAAGAC CATTAATGAT GCGCTGCTAC GCCCCATGGA TAAGCTGGTA
AGAATTGGCG GCGAAGAGTT TCTGGTCATA TTGCCTAACA CTGATGTGGA AGGGGCAACA
GCAGTGACCG AGCGTCTGCT GAAAACTGTT TACGATTTAA ATATTCCACA CTCTGCATCT
GGATACGGGC GCATTACACT AAGCGCAGGG CTCGCCATTA AACATGATGA TGCTAGCAAA
ACAATCGACC ATGTCATGCT GGAAGCCGAT AAGAATTTAT ATGCGGCAAA AACATCTGGA
AGAAACCAAT TGAAAGCGCC TTCGGTAGTG ATAAAAAGCA TTTCTGAAAA TCACCACGCC
CATCTTCCAA TCAAAAGTCA AAGCGAGTAG
 
Protein sequence
MYIEQVGERT LKDCKVLIVD DQASSRLVLE TLLEDTVPCT SVSSGQEAIE YCKFHTPDLI 
LMDVSMPELD GHQTTALLRS KPLCAHIPII FVTSSSTDEE ETRCWDSGCV DFVVKPVNAC
TLRNRVKSHI NHKLRNDLLE KLIYVDKLTG AYNRHYLDDY LPRLVKDELR TSTPLALVIF
DIDHFKLFND MYGHLDGDSC LWKVSKTIND ALLRPMDKLV RIGGEEFLVI LPNTDVEGAT
AVTERLLKTV YDLNIPHSAS GYGRITLSAG LAIKHDDASK TIDHVMLEAD KNLYAAKTSG
RNQLKAPSVV IKSISENHHA HLPIKSQSE