Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MADE_00724 |
Symbol | |
ID | 6777925 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Alteromonas macleodii 'Deep ecotype' |
Kingdom | Bacteria |
Replicon accession | NC_011138 |
Strand | - |
Start bp | 761969 |
End bp | 762958 |
Gene Length | 990 bp |
Protein Length | 329 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 642754158 |
Product | putative response regulator |
Protein accession | YP_002125034 |
Protein GI | 196155545 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTATATTG AGCAAGTTGG CGAGCGTACT TTAAAAGATT GTAAAGTGCT TATCGTTGAC GACCAAGCCA GCAGCAGACT TGTACTGGAA ACATTACTTG AGGACACGGT TCCCTGTACT TCTGTGAGTT CAGGACAGGA GGCTATTGAG TACTGTAAGT TTCACACGCC TGATTTAATC TTAATGGACG TGTCAATGCC TGAACTCGAT GGGCATCAAA CCACCGCGCT TCTAAGGAGT AAGCCTTTAT GCGCTCACAT CCCTATCATT TTTGTTACTT CATCGAGTAC CGATGAAGAA GAGACTCGGT GCTGGGACTC TGGATGCGTT GATTTTGTGG TGAAACCTGT AAATGCATGT ACTCTACGGA ACCGAGTGAA ATCACATATT AATCATAAGC TGAGGAACGA CCTGCTCGAA AAGCTCATTT ATGTAGACAA ACTAACTGGT GCGTACAATC GGCACTACCT TGATGACTAC CTTCCTCGGC TAGTAAAAGA TGAGCTTCGA ACCTCTACTC CCCTTGCCTT AGTCATATTC GACATCGATC ATTTCAAACT CTTTAATGAT ATGTATGGCC ATTTAGACGG CGATAGTTGT TTATGGAAGG TCAGCAAGAC CATTAATGAT GCGCTGCTAC GCCCCATGGA TAAGCTGGTA AGAATTGGCG GCGAAGAGTT TCTGGTCATA TTGCCTAACA CTGATGTGGA AGGGGCAACA GCAGTGACCG AGCGTCTGCT GAAAACTGTT TACGATTTAA ATATTCCACA CTCTGCATCT GGATACGGGC GCATTACACT AAGCGCAGGG CTCGCCATTA AACATGATGA TGCTAGCAAA ACAATCGACC ATGTCATGCT GGAAGCCGAT AAGAATTTAT ATGCGGCAAA AACATCTGGA AGAAACCAAT TGAAAGCGCC TTCGGTAGTG ATAAAAAGCA TTTCTGAAAA TCACCACGCC CATCTTCCAA TCAAAAGTCA AAGCGAGTAG
|
Protein sequence | MYIEQVGERT LKDCKVLIVD DQASSRLVLE TLLEDTVPCT SVSSGQEAIE YCKFHTPDLI LMDVSMPELD GHQTTALLRS KPLCAHIPII FVTSSSTDEE ETRCWDSGCV DFVVKPVNAC TLRNRVKSHI NHKLRNDLLE KLIYVDKLTG AYNRHYLDDY LPRLVKDELR TSTPLALVIF DIDHFKLFND MYGHLDGDSC LWKVSKTIND ALLRPMDKLV RIGGEEFLVI LPNTDVEGAT AVTERLLKTV YDLNIPHSAS GYGRITLSAG LAIKHDDASK TIDHVMLEAD KNLYAAKTSG RNQLKAPSVV IKSISENHHA HLPIKSQSE
|
| |