Gene Shew185_4204 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_4204 
Symbol 
ID5373501 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand
Start bp5009757 
End bp5010689 
Gene Length933 bp 
Protein Length310 aa 
Translation table11 
GC content45% 
IMG OID640832469 
Productresponse regulator receiver modulated diguanylate cyclase 
Protein accessionYP_001368383 
Protein GI153002702 
COG category[T] Signal transduction mechanisms 
COG ID[COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain 
TIGRFAM ID[TIGR00254] diguanylate cyclase (GGDEF) domain 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCATCTTG CAGAATTAAT TGCTCGGCCC CAAAGTGAGA AAGGTAAGAT CCTCATCGTT 
GATGATCAGC CGCTCAATAT CAAAATACTG CATCAACTCT TCAATGAAGA GTATGAGTTG
TTCATGGCGA CCAATGGTGA GCAGGCGATA GCCATATGCC AGAAGGTACA GCCAGATTTA
GTGCTGTTAG ACATTGAAAT GCCTGGTATG TCGGGTTTTG ACGTTTGCCA ACATCTTAAA
GCCGATCCTG AAACCGCGAC TATTGGGGTT ATTTTTGTTA CGGCTCATTT TGATGAAGTG
CAAGAAGTTA AAGGTTTTCA GCTGGGTGCA GTCGATTTTA TCCATAAACC TATCAATCCA
ATTATCACCA CTGCGCGGGT AAAGAATCAG TTTACCCTCA AGCGACAATC CGATCTGTTG
CACTCTATCG CGCTGCTTGA CAGTTTAACT GGCGTCGCCA ATCGACGTCA GTTTGAGCAG
CGACTTCCTG AAATATGGAA ACATTGCTGC CGCAACGAGT TAGCCTTATC TGTGGTGATG
CTAGATGTAG ATTTTTTTAA ACGTTTTAAT GATCGTTATG GTCATCAGGA AGGCGACCAA
TGTTTGCGAC AAGTTGCAAA AGCCATAAGC GATTCTTTGC AGCGCGCGAC TGACTTTGTT
GCACGTTATG GCGGGGAGGA GTTTATTTGT ATTCTGCCAG AAACCAAGCT TGTCGGTGCC
ATTCATACTG CACAGAACAT AGTGAATGCA GTACAAGCTT TGCATCTTGA ACATCTCGAG
TCGAGCTTCC AAGAAGTGAC GATTAGTGCG GGTGTCGCGA GCGTGCTACC CAAAAGTGAT
TTGACTTGGC AAACACTGAT CGAAACAGCG GACCAGCAAT TGTACTTGGC GAAAGAGAGT
GGACGTAACC AAGTAGTGGG CCTAGGGCTT TAG
 
Protein sequence
MHLAELIARP QSEKGKILIV DDQPLNIKIL HQLFNEEYEL FMATNGEQAI AICQKVQPDL 
VLLDIEMPGM SGFDVCQHLK ADPETATIGV IFVTAHFDEV QEVKGFQLGA VDFIHKPINP
IITTARVKNQ FTLKRQSDLL HSIALLDSLT GVANRRQFEQ RLPEIWKHCC RNELALSVVM
LDVDFFKRFN DRYGHQEGDQ CLRQVAKAIS DSLQRATDFV ARYGGEEFIC ILPETKLVGA
IHTAQNIVNA VQALHLEHLE SSFQEVTISA GVASVLPKSD LTWQTLIETA DQQLYLAKES
GRNQVVGLGL