Gene Rleg2_1290 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg2_1290 
SymbolpleD 
ID6980014 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM2304 
KingdomBacteria 
Replicon accessionNC_011369 
Strand
Start bp1309698 
End bp1311071 
Gene Length1374 bp 
Protein Length457 aa 
Translation table11 
GC content63% 
IMG OID643396007 
Productresponse regulator PleD 
Protein accessionYP_002280810 
Protein GI209548893 
COG category[T] Signal transduction mechanisms 
COG ID[COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain 
TIGRFAM ID[TIGR00254] diguanylate cyclase (GGDEF) domain 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0138689 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00259394 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACTGCGC GAATACTGGT GGTTGACGAT ATTCCGGCCA ATGTGAAGCT GCTCGAAGCG 
CGGCTGCTCG CGGAGTATTT CGACGTGATG ACCGCAGCCG ACGGCTATAC GGCGCTGGCG
ATCTGCGAGC GCAACCAGGT CGATCTGATC CTGCTCGACA TCATGATGCC CGGCATAGAC
GGTTTCGAGG TCTGCGAGCG GCTGAAGGCC AACCGCAAGA CCGCCCATAT TCCTGTCGTC
ATGGTTACGG CACTGGATCA GCCGGCCGAT CGCGTCCGCG GCCTGAAGGC CGGCGCCGAC
GATTTCCTCA CCAAACCGGT CAACGATCTT CAGCTGATCT CACGGGTGAA GAGCCTGCTG
CGGCTGAAGA CGTTGAGCGA TGAGTTGCGC ATCCGCGCGG ACACCGCCCA TACGATGGGC
ATCGACGATC TCATGCGGGC AGGCGAGGGC CGCGCCGACG AGACCGGTCA GATCCTGCTC
GTCGACGGCC GCGCCAATTC GCAGGAGCGC ATCATTAAGG CGCTGAAGCC CGTCGCCGAC
GTGCTTGCCC TTTCCGATCC GCAGGCAGCG CTCTTCGAGG CGGCCGAAAG CGCGTTCGAT
CTCGTCATCG TCAACGCCAA TTTCGACGAT TACGATCCGC TGCGCCTCTG CTCGCAGCTG
CGCTCGCTGG AGCGCACCCG CTTTCTGCCG ATCCTGATCA TCACTGAGCA GGGCGCGGAC
GAGATGGTCG TGCGCGCGCT CGATCTCGGC GTCAACGATT ACATCATCCG CCCGGTCGAT
CCCAACGAGC TGGTTGCCCG CAGCCTGACG CAGATCCGTC GCAAGCGCTG CAACGACCGC
CTGCGCGCCA GCGTCAAGCA GACGATCGAG CTTGCCGTGA CCGATCCGCT GACCGGCCTT
TATAACCGGC GTTATCTCGA CAATCACCTG AACGTGCTTT TCAACCGTTC GATGGCGCGG
GGCCGGCCGC TTTCGGTGCT GATCACCGAT ATCGATCGCT TCAAGCAGGT AAACGACACC
TATGGCCATG ACGGCGGCGA CGAAGTGCTG CGGGAGTTTG CCAACCGCGT CCGCTCGACC
ATTCGCGGCG CCGACCTCGC TTGCCGCTAC GGCGGGGAGG AATTCGTCGT CGTCATGCCC
GATACCTCGC CGGAAATTGC CGCCGCTGTT GCCGAGCGCC TGCGCGCGGC CGTCGAAAAC
GCGCCGTTCT TGCTGAAACA TGCGGGAGAG GCGCTGAATG TCACCGCTTC CTTCGGCATC
GCTTCGCGCA TCGGCTCGGT GCTGACCCCG GATCAGCTGA TGAAACAGGC CGATCTTGCG
CTTTACGAGG CCAAGAATAC CGGCCGCAAT CGCGTCGTCG CCGCGGCCGC CTGA
 
Protein sequence
MTARILVVDD IPANVKLLEA RLLAEYFDVM TAADGYTALA ICERNQVDLI LLDIMMPGID 
GFEVCERLKA NRKTAHIPVV MVTALDQPAD RVRGLKAGAD DFLTKPVNDL QLISRVKSLL
RLKTLSDELR IRADTAHTMG IDDLMRAGEG RADETGQILL VDGRANSQER IIKALKPVAD
VLALSDPQAA LFEAAESAFD LVIVNANFDD YDPLRLCSQL RSLERTRFLP ILIITEQGAD
EMVVRALDLG VNDYIIRPVD PNELVARSLT QIRRKRCNDR LRASVKQTIE LAVTDPLTGL
YNRRYLDNHL NVLFNRSMAR GRPLSVLITD IDRFKQVNDT YGHDGGDEVL REFANRVRST
IRGADLACRY GGEEFVVVMP DTSPEIAAAV AERLRAAVEN APFLLKHAGE ALNVTASFGI
ASRIGSVLTP DQLMKQADLA LYEAKNTGRN RVVAAAA