| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_2463 |
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| Symbol | |
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| ID | 3964910 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 3113939 |
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| End bp | 3114844 |
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| Gene Length | 906 bp |
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| Protein Length | 301 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 637921554 |
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| Product | response regulator receiver modulated diguanylate cyclase |
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| Protein accession | YP_527935 |
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| Protein GI | 90022108 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGAAAA TACTTGTCGT AGACGACGTA GAAGACAACA TAGTATTGCT CACTTTCGAC
TTGGAAGACG ACGGCTTTGA CGTCGAACCT GCTCGCTCCG GGCAGGAGTG CCTAGATAAG
GTAGCGGCTG AAAAGCCAGA TATGATTCTG TTAGACATTC GCATGCCCGG CCTGAGCGGC
TTAGAAACAT TAGAGATCCT TAAATCTGAC GAAGCCACGC GAATGATCCC AGTAATAATG
GTATCCGCAA CCACTGGCGA CCAAAGCATC ATCCGCGCGC TCGATCTAGG CGCCCACGAT
TTTGTAAGCA AACCTATCGA ATACCCTGTG CTCGCCGCGC GCATGCGCAG TGCACTTCGC
CTTATACAAG CCAAACGCGA CCTGGAAAAA GCAAACAAGG AGCTTGAACG CTTAGCAACT
AGGGACCCAC TCACAGGCAT TAATAACAGG CGCAGCTTTT TTAAACTGGC AGAAGCAGAG
CTAACCAAAA CAATTCGACA TGGTCGCGAT ATCGCCTTGC TCATGTTAGA TGCCGACCAT
TTCAAGATGA TCAATGACAC CTACGGCCAT GCCGCAGGCG ACGAAGCATT GCTCACCATC
ACCGAAATTT GCCAAAACGC CTGCCGTGAA TCCGATATTC TCGCCCGCCT AGGTGGTGAA
GAGTTTGCCA TTTGCTGCCC CGATACCAAT CTAGAGGGGG CATACGCCGT AGCAGAGCGT
ATTCGTCAAC AATGCGAAAA TACAGTTATT GAGCACAATT CTGCATCGTT TGGCATCACT
CTAAGTATTG GCATAACCAC CTTTGTACCC AGTCAAGACA AATCGATAAC CGAGATGCTA
CAACGCGCCG ACAACCTTTT GTACCAAGCC AAAGAAATGG GGCGCAACCG CTCTATTGCC
TGCTAA
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| Protein sequence | MTKILVVDDV EDNIVLLTFD LEDDGFDVEP ARSGQECLDK VAAEKPDMIL LDIRMPGLSG
LETLEILKSD EATRMIPVIM VSATTGDQSI IRALDLGAHD FVSKPIEYPV LAARMRSALR
LIQAKRDLEK ANKELERLAT RDPLTGINNR RSFFKLAEAE LTKTIRHGRD IALLMLDADH
FKMINDTYGH AAGDEALLTI TEICQNACRE SDILARLGGE EFAICCPDTN LEGAYAVAER
IRQQCENTVI EHNSASFGIT LSIGITTFVP SQDKSITEML QRADNLLYQA KEMGRNRSIA
C
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