| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_0065 |
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| Symbol | |
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| ID | 4602322 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 70912 |
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| End bp | 71829 |
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| Gene Length | 918 bp |
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| Protein Length | 305 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 639779377 |
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| Product | response regulator receiver protein |
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| Protein accession | YP_925947 |
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| Protein GI | 119773207 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGGAGC CTTACACAGT ACTCGTCGTT GACGATGTTA AAACCAACCT GATGATAATG
GGCCAAAGTC TCAAGGGACT TTACCAAATT CTCGAGGCAA GTAGCGGCGC CCAATGCCTG
AAGCTCGCCC GCAGCGAGCC TCAGCCCGAT CTGATTTTGT TGGACGTGGT AATGCCTGAC
CTCGATGGTT ATGAGGTTTG CAGAGCGCTA AAGAGCGACC CCGCAACCGC TGAGATCCCC
ATCATTTTCG TGACCGGCAA AGACTCTGAT GAAGATGAGC AGTATGGGCT GGAGCTCGGT
GCCGTCGATT ACATCACCAA GCCAATCAGA CCGGCCATAG TGCGCGCCCG GGTCTGCGCC
CACATACAGC TCAAGCAGCA GCGAGACAGG TTGCAGTCAA TGGCGATGCA CGACCAACTC
ACCGGGCTAT ATAACCGTCA CTTTTTGATT GAATGCGCAT CACAACGTTT GGCCAGGGTG
GCACGCCATC GTAATCCCAT GACGCTGGTG TTAATGGATG TGGACCATTT CAAGCGGGTA
AACGATAACT ATGGCCACCA TGTTGGCGAC AAGGTACTGA TTGAGGTTGC CCGCTTGCTC
AGCACCAACA TGCGCCGGGA GGATGTCGTC GCCCGTTTAG GAGGGGAAGA GTTTGTGATG
CTGATGGACT GTAGCCTCGA TAATGCTGCT GCCAAGGTTG AGCATCTGAG ACACCTGCTG
GAGGCTTTAG AGCCAGACGG CATTAAAGTT ACCGGCAGCT TTGGGTTGGT AGAGGCAAGC
CCCTATAACG CTGACTTCTC CCATTTGTTG GTGTTGGCCG ATGATGGGGT GTATCGCGCC
AAAACACAGG GACGAAACTG TGTTGTGTGT CACCGGGCTG AGGCGCCGGC CCTGCGGGGC
AAGGTCTCGA CTGATTAA
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| Protein sequence | MMEPYTVLVV DDVKTNLMIM GQSLKGLYQI LEASSGAQCL KLARSEPQPD LILLDVVMPD
LDGYEVCRAL KSDPATAEIP IIFVTGKDSD EDEQYGLELG AVDYITKPIR PAIVRARVCA
HIQLKQQRDR LQSMAMHDQL TGLYNRHFLI ECASQRLARV ARHRNPMTLV LMDVDHFKRV
NDNYGHHVGD KVLIEVARLL STNMRREDVV ARLGGEEFVM LMDCSLDNAA AKVEHLRHLL
EALEPDGIKV TGSFGLVEAS PYNADFSHLL VLADDGVYRA KTQGRNCVVC HRAEAPALRG
KVSTD
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