| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Glov_2955 |
|---|
| Symbol | |
|---|
| ID | 6369450 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter lovleyi SZ |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010814 |
|---|
| Strand | + |
|---|
| Start bp | 3170007 |
|---|
| End bp | 3170933 |
|---|
| Gene Length | 927 bp |
|---|
| Protein Length | 308 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 642678368 |
|---|
| Product | response regulator receiver modulated diguanylate cyclase |
|---|
| Protein accession | YP_001953182 |
|---|
| Protein GI | 189426005 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
|---|
| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGACACCGG AACGTGATGG AAAGCTGATG ATCCTGCTGG TGGACGATGC CCCCACCAAC
ATCCAGATGT TGAATGAGAC CCTGAAGGAC GGCTACCACC TCTTCTTTGC CACCAATGGC
CGCGATGCCC TGAGGATCGC CTCGGAATCA CTGCCGGACC TGATTCTCCT GGACGTCATC
ATGCCGGAAA TGGACGGGTA CGAGGTCTGC CGTAACCTGA AGGCCGACCC GATCCTGAGG
GATGTACCGA TCATCTTCAT CACCGCCATG AGTCAGCAGG AAGACGAAGC GATCGGTCTT
GAGCTCGGTG CGGTCGATTA TATTGCCAAA CCGTTCAACC CGACCATTGT CCGCTTAAGG
ATTCGCAACC AGATTGAACT GAAACGCCAG CGTGATCTGC TGGCCCGGCT CTCTCACCTG
GACGGTCTGA CCGGCATACC CAACCGACGG GCGCTGGATG AGGCACTGGA ACGGGAATGG
CGGCGCGGCA GCCGTTCCCT GAAACCGTTA TCGCTGTTGA TGATCGATAT TGACCATTTC
AAGGCCTATA ACGACAGTTG CGGGCACTTG GCCGGTGACG ACTGCCTGAG GACGGTTGCC
CAGACCCTCA AACAGTCATT GGGACGGGCG GCCGATTTTG TCGGTCGCTA TGGCGGTGAA
GAATTTCTGG CGGTTCTGCC GGAGACCGAT GCAGACGGCG CCCAGGTGGT GGCCCGCGAG
GTCATCGAGG AGATGGCAAA GCTTGCCATT CCCCATCCAG CCTCCCCCCA GGGTGAAAAG
GTCACCATCA GTATCGGTAT TGCCACTGCC GTTGCCAAGC GCGAGCATCT CCCCGTCTTC
CTGCTCCAGG AGGCGGACAG CGCACTCTAC CGGGCCAAGC AGGAAGGACG CAACCGGATT
GTAGCCACGC CGCTGCTCTC CTGTTGA
|
|---|
| Protein sequence | MTPERDGKLM ILLVDDAPTN IQMLNETLKD GYHLFFATNG RDALRIASES LPDLILLDVI
MPEMDGYEVC RNLKADPILR DVPIIFITAM SQQEDEAIGL ELGAVDYIAK PFNPTIVRLR
IRNQIELKRQ RDLLARLSHL DGLTGIPNRR ALDEALEREW RRGSRSLKPL SLLMIDIDHF
KAYNDSCGHL AGDDCLRTVA QTLKQSLGRA ADFVGRYGGE EFLAVLPETD ADGAQVVARE
VIEEMAKLAI PHPASPQGEK VTISIGIATA VAKREHLPVF LLQEADSALY RAKQEGRNRI
VATPLLSC
|
|---|
| |