| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cagg_0841 |
|---|
| Symbol | |
|---|
| ID | 7268293 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chloroflexus aggregans DSM 9485 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011831 |
|---|
| Strand | + |
|---|
| Start bp | 1047167 |
|---|
| End bp | 1049314 |
|---|
| Gene Length | 2148 bp |
|---|
| Protein Length | 715 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 643565690 |
|---|
| Product | response regulator receiver modulated diguanylate cyclase |
|---|
| Protein accession | YP_002462199 |
|---|
| Protein GI | 219847766 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
|---|
| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.101081 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAACCGG ATCCCGCTGA ACAGTTTGAA GCGTTACGAC GCCGATACGC AGCACAAATT
TCCGACCGCA TTCAGGCCAT TTTCGATGCG TGGCATCGGC TTGAGCAGAG TGGATGGGAC
AATAGCATCG GTACCGAGAC ACGGCAACTG GCCCACCGGT TAGCCGGCTC TGCTGCTATG
TTCGGTTTTG CCGATCTGGG TGCTGTTGCC CGCGAGATCG ATATTGGCCT GAAAGAGTGG
CTCGAAAACG GGCGGCCACT CGATGCAATG GTCCGTCACC ATCTTGCCCA GCAGATCGCA
CTCTTGCAGC GGATGTTACG TGATGGTAAC GCCACTGCGA TACTGCCACC AGCCCTTGAG
CCACCTTCGG CAGCACCGTC GTCATTACCA TCCGAAGCTG TCCCGGTCCC GGAATCGCCT
CCTGCTCCAC CATTGCCGAC ATCGCCGCCA TTACCCCCAT TGACAGCAGC AGTGCAAGAG
GCCCGTAGCC ACCCCCATTC GATCATTATT GTCGAGGATG ATCAGGCATT CGCCGCCAAT
TTAAGCGAAC AACTGCGTCT CTTTAACTAC GATGTTCATG TCTTCCACGA TCTCGAAGGA
CTGTCGACCG TGGTGCGAGC ACTGAACCCG GCGGCGATTG TGATGGATGT CATCTTCCCC
AACGGCGATC TGGCCGGCAT CGAAGCTATC GCCGCCGTTC AGCGTGAGCG TACCACCCCG
CTCCCGGTTA TCTTTGTGTC ACAGCGCGAT GATTTTGCAG CCCGCCTGGC CGCAGTTCGC
AGCGGTGGTC ATGCTTACTT CACCAAACCG GTTGATGCCG GACGGTTGAT CGATGCCATC
GACCGTCTCA CCGGCTCAGA AGAGAATCAA CCACTGCGCG TGTTGATCGT CGACGATGAC
GCCGACTTTG GTCAGCAATG TGTCCAAAGT TTAGAAGCGG CCGGCATGAT CGCGCGGGCA
ATTGCCGACC CCCGCGAAAC GCTCGAACAA TTACAAGCAT TTCAACCGGA TTTAGTCATT
CTCGATATGT ATATGCCGCT CTGCAACGGC AAAGAACTGG CCAGTATCAT CCGCCAACAA
GATCGTTACG TTGCACTACC GATTGTCTTT CTCTCGGCAG AAACCAATCG CCAACAACAA
CAATCGGCAC TATCACTCGG TGCCGACGAT TTTCTCGCCA AGCCGATCAG TCCATCAGAA
CTTGTCGCTG CCATCTCGGC TCGTGCTCAA CGTGCGCGAC ATATCCGCCG TTTTCTCATC
CGTGATAGCC TGACCGGCCT CCTCAACCAT CAGGCGGTTG AAGAGGAACT GGCCCGCGAG
TTTGCCCGTG CCGAACGACT GAATCAGCCA TTGGCGATTG CCATTATCGA TCTCGATCAC
TTCAAACGGA TTAACGACTC GTATGGTCAC GTCGTCGGTG ACCAAGTTTT GCGGAGCTTT
GCCCGCTTAC TCCAACAACG CTTGCGCAAG AGTGATTTGA TCGGGCGGCA CGGCGGAGAA
GAATTCTTAA TTGCGTTGCC GAATACTTCA TTAGTTGAGG CACGCACACT AATCGACACC
GTGCGCAGCA GTTTTGCGGC ATTACGCCAC TATGGGCCGG CAGGTATGTT CAGTGTGACG
CTCAGCGCCG GTATTGCCGG CTATCCACAG CATCGCAGTC AGATTGGCAT GATGCAAGCA
GCCGATCAAG CACTCTATCA GGCCAAACGG GAGGGACGCA ACCGGGTTGT AGTTGATACC
ACCGGTCAAG AGTCGGTACC GATTGTTAAA GAACGATCGG AGATACCGTC AACTGTGCTC
GCACCCACTT GGCGCGCACT CGTTATCAGC GCCAACGGGA TTCAACGGCG ATTGCTCCGG
CAAGCTCTCG GCGCGCATGG TCTGATGTAC GATATGATCG ACAACGTCGA GCGTGCGTTC
ACCTACGAAG CGCCGATTCC ACCCAACCTC TTGTTGGTGG ATATGACCCA AATTGAAGGT
CAACGCACCT CACACCTCGT TCTACTCCGT GAACGATTTG AGCAGGCGCG GATTATCACG
GTTGCACCGG TTGCCGCCGA ACCGCGTGCT GCCACGACGG TGGCATTCGG CGCCGATGAT
TATCTCTTGA CTCCGCTCGC TTCCGGGCGC CTTGACGGCC CTACTTGA
|
|---|
| Protein sequence | MKPDPAEQFE ALRRRYAAQI SDRIQAIFDA WHRLEQSGWD NSIGTETRQL AHRLAGSAAM
FGFADLGAVA REIDIGLKEW LENGRPLDAM VRHHLAQQIA LLQRMLRDGN ATAILPPALE
PPSAAPSSLP SEAVPVPESP PAPPLPTSPP LPPLTAAVQE ARSHPHSIII VEDDQAFAAN
LSEQLRLFNY DVHVFHDLEG LSTVVRALNP AAIVMDVIFP NGDLAGIEAI AAVQRERTTP
LPVIFVSQRD DFAARLAAVR SGGHAYFTKP VDAGRLIDAI DRLTGSEENQ PLRVLIVDDD
ADFGQQCVQS LEAAGMIARA IADPRETLEQ LQAFQPDLVI LDMYMPLCNG KELASIIRQQ
DRYVALPIVF LSAETNRQQQ QSALSLGADD FLAKPISPSE LVAAISARAQ RARHIRRFLI
RDSLTGLLNH QAVEEELARE FARAERLNQP LAIAIIDLDH FKRINDSYGH VVGDQVLRSF
ARLLQQRLRK SDLIGRHGGE EFLIALPNTS LVEARTLIDT VRSSFAALRH YGPAGMFSVT
LSAGIAGYPQ HRSQIGMMQA ADQALYQAKR EGRNRVVVDT TGQESVPIVK ERSEIPSTVL
APTWRALVIS ANGIQRRLLR QALGAHGLMY DMIDNVERAF TYEAPIPPNL LLVDMTQIEG
QRTSHLVLLR ERFEQARIIT VAPVAAEPRA ATTVAFGADD YLLTPLASGR LDGPT
|
|---|
| |