| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg_1382 |
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| Symbol | pleD |
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| ID | 8012475 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012850 |
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| Strand | + |
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| Start bp | 1367904 |
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| End bp | 1369277 |
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| Gene Length | 1374 bp |
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| Protein Length | 457 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 644823967 |
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| Product | response regulator PleD |
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| Protein accession | YP_002975213 |
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| Protein GI | 241204117 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.390598 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTGCGC GAATACTGGT GGTTGACGAT ATTCCGGCCA ACGTGAAGCT GCTCGAAGCG
CGGCTGCTTG CGGAGTATTT CGACGTGATG ACCGCCGCCG ACGGCTATAC GGCACTGGCG
ATCTGCGAGC GCAACCAGGT CGATCTCATC TTGCTCGACA TCATGATGCC CGGCATAGAC
GGTTTCGAGG TCTGCGAGCG CCTGAAGGCC AGCCAGAAGA CCGCCCATAT TCCAGTCGTC
ATGGTCACCG CGCTCGACCA GCCGACCGAC CGCGTACGCG GCCTGAAGGC TGGCGCTGAC
GACTTTCTCA CCAAGCCGGT CAACGATCTG CAGTTGATCT CCCGGGTGAA GAGCCTGCTG
CGGCTGAAGA CGTTGAGCGA TGAGCTGCGC ATCCGCGCCG ACACTGCTCA TACGATGGGC
ATCGATGACC TCACACGGGC AGGCGAGGGC CGCGCCGACG AGACCGCTCA GGTCCTGCTC
GTCGACGGTC GCGCCAATTC GCAGGAGCGC ATCGTCAAGG CGCTGAAGCC CGTCGCCGAC
GTGCTTGCCC TCTCCGATCC GCAGGCCGCC CTCTTCGAGG CCGCCGAAAG CGCGTTCGAT
CTCGTCATCG TCAATGCCAA CTTCGACGAT TACGATCCGC TTCGCCTCTG CTCGCAGCTG
CGCTCGCTGG AGCGCACCCG CTTCCTGCCG ATCCTGATCA TCACCGAGCA GGGCGCTGAC
GAAATGGTGG TGCGCGCGCT CGATCTCGGC GTCAACGACT ACATCATCCG CCCGGTCGAT
CCCAACGAAC TGGTTGCCCG CAGCCTGACG CAGATCCGCC GCAAGCGCTA TAACGACCGC
CTGCGCGCCA GCGTCAAGCA GACGATCGAG CTTGCCGTGA CCGATCCGCT GACCGGCCTT
TATAACCGGC GCTATCTCGA CAATCACCTG AACGTGCTCT TCAACCGTTC GATGGCGCGG
GGCCGGCCGC TTTCGGTGCT GATCACCGAT ATCGACCGCT TCAAGCATGT GAATGACACC
TACGGTCATG ACGGCGGCGA CGAGGTGCTG CGCGAATTTT CAAGTCGCGT CCGTTCGACC
ATCCGCGGTG CCGATCTCGC CTGCCGCTAC GGTGGAGAGG AATTCGTCGT CGTGATGCCC
GACACCTCGC CGGAAATTGC CGCCGCCGTC GCCGAGCGCC TCCGCGCGGC GATCGAAAGT
GCTCCCTTCA TGCTGAAACA CTCCGGGGAA GCGCTGAGCG TCACGGCTTC CTTCGGCATC
GCCTCGCGTA TTGCGTCGGT GCTGACCCCG GGCCAGCTGA TGAAACAGGC GGATCTGGCT
CTTTACGAGG CCAAGAATAC CGGCCGCAAC CGTGTGGTCG CCGCGGCCGC GTGA
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| Protein sequence | MTARILVVDD IPANVKLLEA RLLAEYFDVM TAADGYTALA ICERNQVDLI LLDIMMPGID
GFEVCERLKA SQKTAHIPVV MVTALDQPTD RVRGLKAGAD DFLTKPVNDL QLISRVKSLL
RLKTLSDELR IRADTAHTMG IDDLTRAGEG RADETAQVLL VDGRANSQER IVKALKPVAD
VLALSDPQAA LFEAAESAFD LVIVNANFDD YDPLRLCSQL RSLERTRFLP ILIITEQGAD
EMVVRALDLG VNDYIIRPVD PNELVARSLT QIRRKRYNDR LRASVKQTIE LAVTDPLTGL
YNRRYLDNHL NVLFNRSMAR GRPLSVLITD IDRFKHVNDT YGHDGGDEVL REFSSRVRST
IRGADLACRY GGEEFVVVMP DTSPEIAAAV AERLRAAIES APFMLKHSGE ALSVTASFGI
ASRIASVLTP GQLMKQADLA LYEAKNTGRN RVVAAAA
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