More than 300 homologs were found in PanDaTox collection
for query gene Mmar10_1277 on replicon NC_008347
Organism: Maricaulis maris MCS10



Page 1 of 3    << first  < prev  1  2  3    next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008347  Mmar10_1277  response regulator receiver modulated diguanylate cyclase  100 
 
 
454 aa  894    Maricaulis maris MCS10  Bacteria  normal  0.410696  normal  0.0388481 
 
 
-
 
NC_010338  Caul_1497  response regulator PleD  54.34 
 
 
454 aa  461  9.999999999999999e-129  Caulobacter sp. K31  Bacteria  normal  normal  0.122959 
 
 
-
 
NC_009719  Plav_2815  response regulator receiver modulated diguanylate cyclase  51.97 
 
 
457 aa  443  1e-123  Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.631579  normal  0.0857187 
 
 
-
 
NC_009636  Smed_0926  response regulator PleD  51.43 
 
 
455 aa  426  1e-118  Sinorhizobium medicae WSM419  Bacteria  normal  normal  0.773886 
 
 
-
 
NC_009485  BBta_4746  response regulator PleD  50 
 
 
466 aa  427  1e-118  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.0979514  normal  0.753316 
 
 
-
 
NC_007778  RPB_2413  response regulator PleD  52.53 
 
 
457 aa  427  1e-118  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.592932  normal  0.173821 
 
 
-
 
NC_011989  Avi_1750  response regulator PleD  50.66 
 
 
457 aa  424  1e-117  Agrobacterium vitis S4  Bacteria  normal  0.263569  n/a   
 
 
-
 
NC_012850  Rleg_1382  response regulator PleD  51.41 
 
 
457 aa  424  1e-117  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.390598 
 
 
-
 
NC_011666  Msil_0424  response regulator receiver modulated diguanylate cyclase  50.55 
 
 
469 aa  418  1e-116  Methylocella silvestris BL2  Bacteria  n/a    normal  0.97349 
 
 
-
 
NC_007958  RPD_3038  response regulator PleD  52.09 
 
 
457 aa  420  1e-116  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.372566  normal  0.319547 
 
 
-
 
NC_007964  Nham_2442  response regulator PleD  52.42 
 
 
457 aa  418  1e-116  Nitrobacter hamburgensis X14  Bacteria  normal  0.696702  n/a   
 
 
-
 
NC_011004  Rpal_3541  response regulator PleD  51.43 
 
 
457 aa  418  1e-116  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_011369  Rleg2_1290  response regulator PleD  50.33 
 
 
457 aa  415  9.999999999999999e-116  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.0138689  hitchhiker  0.00259394 
 
 
-
 
NC_007406  Nwi_1432  response regulator PleD  51.54 
 
 
457 aa  412  1e-114  Nitrobacter winogradskyi Nb-255  Bacteria  normal  normal 
 
 
-
 
NC_007925  RPC_3308  response regulator PleD  50.88 
 
 
457 aa  409  1e-113  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.268667  normal 
 
 
-
 
NC_010581  Bind_1213  response regulator receiver modulated diguanylate cyclase  50.43 
 
 
457 aa  409  1e-113  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  normal 
 
 
-
 
NC_010505  Mrad2831_1864  response regulator receiver modulated diguanylate cyclase  50 
 
 
457 aa  406  1.0000000000000001e-112  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.831894  normal  0.121309 
 
 
-
 
NC_011894  Mnod_7417  response regulator receiver modulated diguanylate cyclase  49.89 
 
 
457 aa  403  1e-111  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.196799  n/a   
 
 
-
 
NC_009668  Oant_3677  response regulator PleD  47.06 
 
 
461 aa  397  1e-109  Ochrobactrum anthropi ATCC 49188  Bacteria  decreased coverage  0.00345303  n/a   
 
 
-
 
NC_007354  Ecaj_0304  response regulator PleD  44.74 
 
 
458 aa  389  1e-107  Ehrlichia canis str. Jake  Bacteria  normal  0.0864091  n/a   
 
 
-
 
NC_008254  Meso_1348  response regulator PleD  49.45 
 
 
457 aa  391  1e-107  Chelativorans sp. BNC1  Bacteria  normal  n/a   
 
 
-
 
NC_007799  ECH_0773  response regulator PleD  44.3 
 
 
458 aa  388  1e-106  Ehrlichia chaffeensis str. Arkansas  Bacteria  normal  n/a   
 
 
-
 
NC_002978  WD0221  response regulator PleD  43.96 
 
 
460 aa  385  1e-105  Wolbachia endosymbiont of Drosophila melanogaster  Bacteria  normal  n/a   
 
 
-
 
NC_010511  M446_6679  response regulator receiver modulated diguanylate cyclase  49.56 
 
 
457 aa  379  1e-104  Methylobacterium sp. 4-46  Bacteria  normal  normal 
 
 
-
 
NC_010725  Mpop_0907  response regulator receiver modulated diguanylate cyclase  47.25 
 
 
457 aa  371  1e-101  Methylobacterium populi BJ001  Bacteria  normal  0.401363  normal  0.40647 
 
 
-
 
NC_010172  Mext_0967  diguanylate cyclase  47.03 
 
 
457 aa  365  1e-100  Methylobacterium extorquens PA1  Bacteria  normal  0.555277  normal  0.0207283 
 
 
-
 
NC_004311  BRA0610  response regulator PleD  44.57 
 
 
461 aa  365  1e-100  Brucella suis 1330  Bacteria  normal  0.961713  n/a   
 
 
-
 
NC_011757  Mchl_0931  response regulator receiver modulated diguanylate cyclase  47.03 
 
 
457 aa  365  1e-100  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.436852  normal  0.104843 
 
 
-
 
NC_009504  BOV_A0575  response regulator PleD  44.13 
 
 
456 aa  357  1.9999999999999998e-97  Brucella ovis ATCC 25840  Bacteria  normal  n/a   
 
 
-
 
NC_007798  NSE_0512  response regulator PleD  40.82 
 
 
456 aa  349  6e-95  Neorickettsia sennetsu str. Miyayama  Bacteria  normal  n/a   
 
 
-
 
NC_007802  Jann_3131  response regulator receiver modulated diguanylate cyclase  43.04 
 
 
464 aa  328  1.0000000000000001e-88  Jannaschia sp. CCS1  Bacteria  normal  normal  0.308445 
 
 
-
 
NC_009952  Dshi_2820  response regulator  41.65 
 
 
462 aa  313  2.9999999999999996e-84  Dinoroseobacter shibae DFL 12  Bacteria  normal  0.229785  normal  0.330149 
 
 
-
 
NC_009049  Rsph17029_2069  response regulator receiver modulated diguanylate cyclase  37.77 
 
 
461 aa  241  2.9999999999999997e-62  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  normal 
 
 
-
 
NC_007493  RSP_0413  response regulator receiver modulated diguanylate cyclase  37.55 
 
 
461 aa  235  1.0000000000000001e-60  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  n/a   
 
 
-
 
NC_009428  Rsph17025_2337  response regulator receiver modulated diguanylate cyclase  37.5 
 
 
461 aa  234  3e-60  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  0.114554  normal 
 
 
-
 
NC_008044  TM1040_2174  response regulator receiver modulated diguanylate cyclase  36.58 
 
 
467 aa  227  4e-58  Ruegeria sp. TM1040  Bacteria  normal  0.0868971  normal 
 
 
-
 
NC_008687  Pden_3982  response regulator receiver modulated diguanylate cyclase  33.97 
 
 
464 aa  216  5e-55  Paracoccus denitrificans PD1222  Bacteria  normal  0.679076  normal 
 
 
-
 
NC_007517  Gmet_0069  response regulator receiver modulated diguanylate cyclase  41.83 
 
 
314 aa  203  7e-51  Geobacter metallireducens GS-15  Bacteria  normal  normal  0.840661 
 
 
-
 
NC_002939  GSU3376  GGDEF/response regulator receiver domain-containing protein  41.18 
 
 
308 aa  197  2.0000000000000003e-49  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_013216  Dtox_1577  response regulator receiver modulated diguanylate cyclase  32.8 
 
 
314 aa  196  6e-49  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  normal 
 
 
-
 
NC_009483  Gura_0195  response regulator receiver modulated diguanylate cyclase  40.49 
 
 
309 aa  194  2e-48  Geobacter uraniireducens Rf4  Bacteria  normal  0.0106599  n/a   
 
 
-
 
NC_011729  PCC7424_0178  response regulator receiver modulated diguanylate cyclase  37.5 
 
 
322 aa  186  1.0000000000000001e-45  Cyanothece sp. PCC 7424  Bacteria  n/a    normal  0.895619 
 
 
-
 
NC_012918  GM21_2951  response regulator receiver modulated diguanylate cyclase  39.35 
 
 
306 aa  184  2.0000000000000003e-45  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_013161  Cyan8802_1169  response regulator receiver modulated diguanylate cyclase  38.04 
 
 
308 aa  182  2e-44  Cyanothece sp. PCC 8802  Bacteria  normal  normal 
 
 
-
 
NC_011146  Gbem_1332  response regulator receiver modulated diguanylate cyclase  38.27 
 
 
306 aa  181  2e-44  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_011726  PCC8801_1139  response regulator receiver modulated diguanylate cyclase  38.04 
 
 
308 aa  182  2e-44  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_010814  Glov_3614  response regulator receiver modulated diguanylate cyclase  39.31 
 
 
310 aa  177  3e-43  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_010814  Glov_1988  response regulator receiver modulated diguanylate cyclase with PAS/PAC sensor  31.25 
 
 
435 aa  176  5e-43  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_007498  Pcar_1177  two component signal transduction response regulator  28.16 
 
 
470 aa  176  9e-43  Pelobacter carbinolicus DSM 2380  Bacteria  normal  n/a   
 
 
-
 
NC_014248  Aazo_1477  response regulator receiver modulated diguanylate cyclase  36.29 
 
 
317 aa  174  2.9999999999999996e-42  'Nostoc azollae' 0708  Bacteria  normal  n/a   
 
 
-
 
NC_011729  PCC7424_5086  response regulator receiver modulated diguanylate cyclase  28.94 
 
 
465 aa  173  6.999999999999999e-42  Cyanothece sp. PCC 7424  Bacteria  n/a    normal 
 
 
-
 
NC_011891  A2cp1_3625  response regulator receiver modulated diguanylate cyclase  37.87 
 
 
322 aa  168  2e-40  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_011145  AnaeK_3557  response regulator receiver modulated diguanylate cyclase  37.87 
 
 
322 aa  168  2e-40  Anaeromyxobacter sp. K  Bacteria  normal  0.457648  n/a   
 
 
-
 
NC_007760  Adeh_3473  response regulator receiver modulated diguanylate cyclase  37.5 
 
 
351 aa  166  5.9999999999999996e-40  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  n/a   
 
 
-
 
NC_008347  Mmar10_0119  response regulator receiver modulated diguanylate cyclase  33.76 
 
 
324 aa  166  1.0000000000000001e-39  Maricaulis maris MCS10  Bacteria  normal  0.969085  normal 
 
 
-
 
NC_008709  Ping_3722  response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)  29.31 
 
 
727 aa  164  2.0000000000000002e-39  Psychromonas ingrahamii 37  Bacteria  normal  normal 
 
 
-
 
NC_008576  Mmc1_1399  response regulator receiver modulated diguanylate cyclase  30.32 
 
 
476 aa  165  2.0000000000000002e-39  Magnetococcus sp. MC-1  Bacteria  normal  normal 
 
 
-
 
NC_011831  Cagg_0841  response regulator receiver modulated diguanylate cyclase  30.31 
 
 
715 aa  165  2.0000000000000002e-39  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.101081  normal 
 
 
-
 
NC_010814  Glov_0963  response regulator receiver modulated diguanylate cyclase  37.84 
 
 
300 aa  164  3e-39  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_007912  Sde_2463  response regulator receiver modulated diguanylate cyclase  36.51 
 
 
301 aa  161  3e-38  Saccharophagus degradans 2-40  Bacteria  normal  normal 
 
 
-
 
NC_008576  Mmc1_2943  response regulator receiver modulated diguanylate cyclase  30.7 
 
 
438 aa  160  4e-38  Magnetococcus sp. MC-1  Bacteria  normal  0.641955  normal 
 
 
-
 
NC_008609  Ppro_1341  response regulator receiver modulated diguanylate cyclase  36.43 
 
 
319 aa  160  6e-38  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_008609  Ppro_0115  response regulator receiver modulated diguanylate cyclase  36.43 
 
 
304 aa  159  8e-38  Pelobacter propionicus DSM 2379  Bacteria  normal  0.113218  n/a   
 
 
-
 
NC_010424  Daud_1846  response regulator receiver modulated diguanylate cyclase  36.03 
 
 
314 aa  159  1e-37  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  n/a   
 
 
-
 
NC_013161  Cyan8802_2067  response regulator receiver modulated diguanylate cyclase  34.25 
 
 
317 aa  158  2e-37  Cyanothece sp. PCC 8802  Bacteria  normal  normal 
 
 
-
 
NC_008740  Maqu_3442  response regulator receiver modulated diguanylate cyclase  29.09 
 
 
539 aa  158  2e-37  Marinobacter aquaeolei VT8  Bacteria  normal  0.677434  n/a   
 
 
-
 
NC_010506  Swoo_1513  response regulator receiver modulated diguanylate cyclase  38.43 
 
 
301 aa  158  2e-37  Shewanella woodyi ATCC 51908  Bacteria  normal  normal  0.0153071 
 
 
-
 
NC_011726  PCC8801_2041  response regulator receiver modulated diguanylate cyclase  34.25 
 
 
317 aa  158  2e-37  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_008346  Swol_0600  response regulator receiver protein  36.07 
 
 
301 aa  158  2e-37  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  normal  n/a   
 
 
-
 
NC_009831  Ssed_1382  response regulator receiver protein  36.33 
 
 
302 aa  157  3e-37  Shewanella sediminis HAW-EB3  Bacteria  normal  normal 
 
 
-
 
NC_010814  Glov_3316  diguanylate cyclase  44.85 
 
 
307 aa  157  3e-37  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_010524  Lcho_3544  response regulator receiver modulated diguanylate cyclase  35.38 
 
 
322 aa  157  3e-37  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  0.0106122 
 
 
-
 
NC_008390  Bamb_1597  response regulator receiver modulated diguanylate cyclase/phosphodiesterase  32.16 
 
 
860 aa  157  3e-37  Burkholderia ambifaria AMMD  Bacteria  normal  0.711633  n/a   
 
 
-
 
NC_009253  Dred_1554  response regulator receiver modulated diguanylate cyclase  32.01 
 
 
419 aa  157  5.0000000000000005e-37  Desulfotomaculum reducens MI-1  Bacteria  normal  n/a   
 
 
-
 
NC_007484  Noc_0319  two component diguanylate cyclase  31.51 
 
 
661 aa  157  5.0000000000000005e-37  Nitrosococcus oceani ATCC 19707  Bacteria  normal  n/a   
 
 
-
 
NC_009715  CCV52592_0462  3-deoxy-d-manno-octulosonic-acid transferase  28.38 
 
 
422 aa  156  9e-37  Campylobacter curvus 525.92  Bacteria  normal  n/a   
 
 
-
 
NC_010551  BamMC406_1617  response regulator receiver modulated diguanylate cyclase/phosphodiesterase  32.02 
 
 
860 aa  155  1e-36  Burkholderia ambifaria MC40-6  Bacteria  normal  normal 
 
 
-
 
NC_009997  Sbal195_4336  response regulator receiver modulated diguanylate cyclase  31.21 
 
 
310 aa  155  1e-36  Shewanella baltica OS195  Bacteria  normal  normal 
 
 
-
 
NC_008009  Acid345_3505  response regulator receiver modulated diguanylate cyclase  29.21 
 
 
665 aa  155  1e-36  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  normal 
 
 
-
 
NC_013739  Cwoe_3139  response regulator receiver modulated diguanylate cyclase  32.08 
 
 
676 aa  155  2e-36  Conexibacter woesei DSM 14684  Bacteria  normal  normal  0.990746 
 
 
-
 
NC_013422  Hneap_0133  response regulator receiver modulated diguanylate cyclase  37.89 
 
 
461 aa  154  2e-36  Halothiobacillus neapolitanus c2  Bacteria  normal  n/a   
 
 
-
 
NC_002939  GSU1643  GGDEF/response regulator receiver domain-containing protein  36.58 
 
 
316 aa  154  2.9999999999999998e-36  Geobacter sulfurreducens PCA  Bacteria  normal  0.176359  n/a   
 
 
-
 
NC_013889  TK90_1372  response regulator receiver modulated diguanylate cyclase  30.07 
 
 
436 aa  154  2.9999999999999998e-36  Thioalkalivibrio sp. K90mix  Bacteria  normal  0.738866  normal  0.941955 
 
 
-
 
NC_007404  Tbd_1269  response regulator receiver modulated diguanylate cyclase/phosphodiesterase  30.69 
 
 
705 aa  154  4e-36  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  normal 
 
 
-
 
NC_009675  Anae109_3583  response regulator receiver modulated diguanylate cyclase  40.17 
 
 
322 aa  154  5e-36  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  hitchhiker  0.000864033 
 
 
-
 
NC_010506  Swoo_2855  response regulator receiver modulated diguanylate cyclase  34 
 
 
415 aa  153  5e-36  Shewanella woodyi ATCC 51908  Bacteria  normal  0.220747  hitchhiker  0.000676798 
 
 
-
 
NC_011831  Cagg_1006  response regulator receiver modulated diguanylate cyclase  34.75 
 
 
312 aa  153  5e-36  Chloroflexus aggregans DSM 9485  Bacteria  normal  normal 
 
 
-
 
NC_011831  Cagg_1830  response regulator receiver modulated diguanylate cyclase  30.72 
 
 
941 aa  154  5e-36  Chloroflexus aggregans DSM 9485  Bacteria  normal  normal 
 
 
-
 
NC_008789  Hhal_0365  response regulator receiver modulated diguanylate cyclase  36.3 
 
 
308 aa  153  5.9999999999999996e-36  Halorhodospira halophila SL1  Bacteria  normal  n/a   
 
 
-
 
NC_011663  Sbal223_4132  response regulator receiver modulated diguanylate cyclase  30.54 
 
 
310 aa  153  7e-36  Shewanella baltica OS223  Bacteria  normal  normal 
 
 
-
 
NC_007498  Pcar_0634  response regulator  26.87 
 
 
470 aa  153  7e-36  Pelobacter carbinolicus DSM 2380  Bacteria  hitchhiker  0.00145352  n/a   
 
 
-
 
NC_009831  Ssed_1723  diguanylate cyclase  33.89 
 
 
420 aa  153  8e-36  Shewanella sediminis HAW-EB3  Bacteria  normal  0.428268  hitchhiker  0.00000158997 
 
 
-
 
NC_008752  Aave_3646  diguanylate cyclase  48.48 
 
 
357 aa  152  1e-35  Acidovorax citrulli AAC00-1  Bacteria  normal  normal  0.567193 
 
 
-
 
NC_011126  HY04AAS1_0207  diguanylate cyclase with PAS/PAC sensor  43.21 
 
 
772 aa  151  2e-35  Hydrogenobaculum sp. Y04AAS1  Bacteria  normal  0.53871  n/a   
 
 
-
 
NC_007509  Bcep18194_C6727  diguanylate cyclase  46.35 
 
 
467 aa  151  2e-35  Burkholderia sp. 383  Bacteria  normal  normal 
 
 
-
 
NC_009439  Pmen_4315  response regulator receiver modulated diguanylate cyclase  28.41 
 
 
554 aa  152  2e-35  Pseudomonas mendocina ymp  Bacteria  normal  normal  0.554314 
 
 
-
 
NC_009665  Shew185_4204  response regulator receiver modulated diguanylate cyclase  30.2 
 
 
310 aa  151  3e-35  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_007954  Sden_1684  GGDEF domain-containing protein  32.95 
 
 
323 aa  151  3e-35  Shewanella denitrificans OS217  Bacteria  normal  n/a   
 
 
-
 
NC_013522  Taci_0157  response regulator receiver modulated diguanylate cyclase  36.26 
 
 
917 aa  150  4e-35  Thermanaerovibrio acidaminovorans DSM 6589  Bacteria  normal  n/a   
 
 
-
 
NC_008577  Shewana3_4015  response regulator receiver modulated diguanylate cyclase  33.96 
 
 
315 aa  150  4e-35  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
Page 1 of 3    << first  < prev  1  2  3    next >  last >>