| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_0748 |
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| Symbol | |
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| ID | 4603001 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 923436 |
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| End bp | 924374 |
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| Gene Length | 939 bp |
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| Protein Length | 312 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 639780083 |
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| Product | response regulator receiver protein |
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| Protein accession | YP_926626 |
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| Protein GI | 119773886 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATAAATC AGGAGCAGCC ATTTAAAGGC TCAGATGATG GACCGCCCAA GGTGCTGATA
GTTGACGATA AGCCATCCAA CATTCAGATA GTCCATCACA TCATCAAAGA CCAGTACCAG
GTGTTGATGG CCACCTCAGG GAAACGTGCC ATTGAAATAT GCCTGGAGAT GTTGCCTGAC
TTGGTGTTGA TGGATGTCAT CATGCCCGAG CTCAGTGGCC TCGATACCTG CAAGCTGATG
AAGCAGCATC CCGAACTGGT TAATATCCCG GTTATTTTTA TTACTGGCCT GCAAGGTCAA
CATGATGAAA ACGCCTGCTG GGATGCCGGT GGGGTGGATT TTATTTCTAA GCCCTTTAAC
GCTACCACCC TTAAAAATCG CATCAAGGCC CAGGTGACCC TGAAACGCCA GAGTGACTTA
TTGCGTCGGC TGGCGTTTTT GGATGGCCTG ACCGGGGTGA AAAATCGTCA TTTCTTCGAT
CAATATCTCG AGACTCAGCT GATGTTGGCA AGGCGCCAGT CTCAGGCTAT CTGTGTGCTG
ATGGTGGATA TCGACTATTT CAAGCAGTAC AACGACAGTT TTGGTCATCA GATGGGGGAT
GAGGCCTTGC GCTCTGTGGC ACAGGCGCTG GGGGAAAGCT GCAGGCGCCC GGCGGATTTG
GTGGCACGCT ATGGCGGTGA AGAGTTTGTG GTCGTACTGC CCAACACCCC AAAAAACGGG
GTAGAGCGGG TTATTGAACG TATTCAGGGG GCAATCGCCG AGCTGGATAT CCACCACCCG
GCATCGGCAA CCGGCATTCT GACGGTGAGC ATGGGTGGCA TGATTTGGCT TGCCGACTAC
CAAAGCACAG AGGCCCTGCT CGGTGAGGCC GATAAACTAT TGTATCGTGC CAAAAGTCTG
GGGCGAAACC GGGCATGTAT TGATGCCAAT ATCCCTTGA
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| Protein sequence | MINQEQPFKG SDDGPPKVLI VDDKPSNIQI VHHIIKDQYQ VLMATSGKRA IEICLEMLPD
LVLMDVIMPE LSGLDTCKLM KQHPELVNIP VIFITGLQGQ HDENACWDAG GVDFISKPFN
ATTLKNRIKA QVTLKRQSDL LRRLAFLDGL TGVKNRHFFD QYLETQLMLA RRQSQAICVL
MVDIDYFKQY NDSFGHQMGD EALRSVAQAL GESCRRPADL VARYGGEEFV VVLPNTPKNG
VERVIERIQG AIAELDIHHP ASATGILTVS MGGMIWLADY QSTEALLGEA DKLLYRAKSL
GRNRACIDAN IP
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