Gene Dtox_1577 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDtox_1577 
Symbol 
ID8428541 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum acetoxidans DSM 771 
KingdomBacteria 
Replicon accessionNC_013216 
Strand
Start bp1655534 
End bp1656478 
Gene Length945 bp 
Protein Length314 aa 
Translation table11 
GC content37% 
IMG OID645033910 
Productresponse regulator receiver modulated diguanylate cyclase 
Protein accessionYP_003191059 
Protein GI258514837 
COG category[T] Signal transduction mechanisms 
COG ID[COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain 
TIGRFAM ID[TIGR00254] diguanylate cyclase (GGDEF) domain 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACAAGG TTCTTATTGT TGATGATGTA CCTGTCAGCA TCAAAGTGCT GGGCGAGTTA 
TTAAAGGAAC ATTACGAAAT ACTGGTGGCT ACTAGTGGCA GCAGGGCTAT TGAGGTGGCA
TTGAAAAACC AACCGGATTT AATACTTATG GATGTTGTCA TGCCGGGTAT GGATGGATTA
GAAACTTGCA GGCGGCTAAA AGAAAATACG CTGACAGCAG AAATACCGGT TATTTTTCTT
ACCGCTATGT CTGAAAGCTC TGATGTAATA AAAGGTTTTG AAGTTGGCGG TCAGGACTAT
GTTGTGAAAC CTTTTAATAA AATAGAGGTC ATTGCCCGGG TAAAAAACCA TATGGAGTTG
AGAAAATCAA AAGAAAAGAT TAAACAATAT GCCTTGGAAT TAGAACGAAA AAATGAAGAA
TTGCAACAGT TATTACAAAA AGTTGAACAA ATAGCGATAA CGGACTTCCT AACGGGAATA
ACCAACAGGC GTTTTGCCAT TGACAGAATG AATGAAGAAT TATCAAGAAT TAATCGTGGT
GAAGATGGTT TTTCCCTTTT AATGATAGAT ATTGACAACT TTAAGGACAT AAATGATTCT
CATGGACATG AATGTGGGGA CTATATTTTA AAAGATGTAG TGAATTTAAT CAAGTCTGTT
TTGCGAAATT ATGACATGAT GGCTCGGTGG GGCGGAGAAG AATTTTTAGT CATGTTACCG
AGTACAGAAA TAAACGATGC AAAAATAGTA GCCGAAAAAA TCATTTCTAA TGTCAGAACT
CAAATCTTTA CTTATAAAGG TAATTCATTT CATGTAACCA TTACCGCCGG AGTGGCCCAA
CATCAAGCCG GAGATGACTT GGATAGCATT ATTAAAAGAG CGGATGAAGC AATGTACCAT
GGAAAAAAAA GCGGCAAAAA CTGTGTAAAA AACTCCTGTC ATTAA
 
Protein sequence
MNKVLIVDDV PVSIKVLGEL LKEHYEILVA TSGSRAIEVA LKNQPDLILM DVVMPGMDGL 
ETCRRLKENT LTAEIPVIFL TAMSESSDVI KGFEVGGQDY VVKPFNKIEV IARVKNHMEL
RKSKEKIKQY ALELERKNEE LQQLLQKVEQ IAITDFLTGI TNRRFAIDRM NEELSRINRG
EDGFSLLMID IDNFKDINDS HGHECGDYIL KDVVNLIKSV LRNYDMMARW GGEEFLVMLP
STEINDAKIV AEKIISNVRT QIFTYKGNSF HVTITAGVAQ HQAGDDLDSI IKRADEAMYH
GKKSGKNCVK NSCH