Gene Gbem_1228 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGbem_1228 
Symbol 
ID6781212 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter bemidjiensis Bem 
KingdomBacteria 
Replicon accessionNC_011146 
Strand
Start bp1424938 
End bp1425987 
Gene Length1050 bp 
Protein Length349 aa 
Translation table11 
GC content63% 
IMG OID642767219 
Productresponse regulator receiver modulated diguanylate cyclase 
Protein accessionYP_002138043 
Protein GI197117616 
COG category[T] Signal transduction mechanisms 
COG ID[COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain 
TIGRFAM ID[TIGR00254] diguanylate cyclase (GGDEF) domain 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCAGCG GAAATGAAAG CTTGCGGCAG AAGATCCTGA TCGTCGACGA CACGCCGGCC 
AACATCGAGA TCCTTTACAG CATCCTCAAA GGGGCGTACG ACGTCCTTTT CGCCAAGAAC
GGGGGTGACG CCATCCGCAT CGTGCAGCAG CAGTTGCCGG ACCTGATCCT TTTGGACATC
ATGATGCCGG GGATGGACGG CTACCAGGTC TGCCGGGTGC TCAAGGCGGA CCCGCTGACC
GCAAAGATCC CGATCATCTT CGTCACCGCC ATGAGTAAGG AGGAGGACGA GGCCATGGGG
CTGCAGTCAG GGGCCATTGA CTACCTCACC AAGCCGATAA GCCCGCCCAT CGTGCTGGCC
AGGGTGAGAA ACCACCTGCA GCTCAAGCGG AACTCGGACC TCTTGGAGCA GCTCACCGCG
CAACTGGAGG AGAAGAACCG GGCGCTGGAG GTGCTGGCCC GGGTCGATGG CCTGACCGGC
GTCGCCAACC GCAGGCACTT CGACGAGACA CTGCGGCTGG AGGTGCAGCG CGCCATGCGC
AACGGGCGTT ACCTCTCCCT TATCCTGTGC GATATCGATT TCTTCAAGAA TTACAACGAC
CATTACGGGC ACGTGGCCGG GGACAAATGC CTGCAGTCCT TCGGGGAACT GCTCCAGGGA
AGCTTCAAGA GGGCGGGGGA GGTGCCGGCG CGCTACGGCG GCGAGGAGTT CGCCGTCGTG
CTCCCGGACA GCAGGCCGGA AATTGCCGAG GGGCTTGGGG AGCGGCTGCG TCGGATGCTG
CAGGAAAAGG CGCTGCCGCA CGAGGCGTCG GAGCTGGGGG TGGTGACCGT AAGCGTCGGT
GTGTCGGGAG GGCTCGTGGC GCGGGGCCAG GACGCCGAGT GGTTCATCAA GGAAGCTGAC
CGGGCGCTGT ACCTTGCCAA GTCCGGAGGA AGAAACAGGG TCGCCCTATC TTCCCAATGC
GCGCCAGAGT CCGGCGATTC CCATGAGGGC TACGGCGACC CCTGCGAGCC GGAGCATGAC
CTGGTGAAGC TTACCGGATA TGGCGCTTGA
 
Protein sequence
MSSGNESLRQ KILIVDDTPA NIEILYSILK GAYDVLFAKN GGDAIRIVQQ QLPDLILLDI 
MMPGMDGYQV CRVLKADPLT AKIPIIFVTA MSKEEDEAMG LQSGAIDYLT KPISPPIVLA
RVRNHLQLKR NSDLLEQLTA QLEEKNRALE VLARVDGLTG VANRRHFDET LRLEVQRAMR
NGRYLSLILC DIDFFKNYND HYGHVAGDKC LQSFGELLQG SFKRAGEVPA RYGGEEFAVV
LPDSRPEIAE GLGERLRRML QEKALPHEAS ELGVVTVSVG VSGGLVARGQ DAEWFIKEAD
RALYLAKSGG RNRVALSSQC APESGDSHEG YGDPCEPEHD LVKLTGYGA