| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Glov_2442 |
|---|
| Symbol | |
|---|
| ID | 6367223 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter lovleyi SZ |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010814 |
|---|
| Strand | + |
|---|
| Start bp | 2612076 |
|---|
| End bp | 2613026 |
|---|
| Gene Length | 951 bp |
|---|
| Protein Length | 316 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 642677858 |
|---|
| Product | response regulator receiver modulated diguanylate cyclase |
|---|
| Protein accession | YP_001952676 |
|---|
| Protein GI | 189425499 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
|---|
| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.103678 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCTGACA CCGGTATCCC GATTCTGCTG GTTGACGACG ACCGTTTCAT GCGGACAGTG
CTGTGCCAGA CCCTGCAGGA TGCAGGCTAC CGGGTTAGTC AGGCTGCCAA CGGCAAAGAG
GCGCTGGAGC TTTGCCGCTC AACCTACTTC CCGATCATCC TGACCGACTG GGTCATGCCG
GAGATGGATG GTATTGCGTT CTGCCGCGCC TTTCGGGAAC TGGCTGCAGA GTGCTACACC
TACCTGATCC TGCTGACCTC GCAGGAGGGC AAGGAAAAAC TGATTGAAGG GCTTGAGGCC
GGCGCCGACG AGTATCTGAT CAAGCCGGTC AATGAAGCGG AATTGATGGT GCGCCTCAAG
ACGGCCCGCC GGATTCTTGA CCTGGAAAGT TCCCTGCAGA AAAGCCTGGA AGAGATCAAA
CAGCTCTCGA TCCGGGACGC CCTGACCGGC GCCTTTAACC GCGGTTATCT GGACCAGCAT
CTGCCACATG AGATCCGCCG TGCAGACCGC TATCTGCGTG ACCTGTCACT GATCATGATG
GACCTTGACC ATTTCAAGAA GATCAACGAC ACCTGGGGCC ACCAGGCCGG TGATGCGGTT
CTGCAGCACT GTATCCGCAT CATTGCAGGC ACAATACGCC ATGAAGTTGA CTGGGTGGCC
CGCTATGGCG GCGAGGAGTT TGTTCTGGTG CTGCCCGAAA CCGACCGGAC CGGCTGCAGG
GTGGTTGCGG AACGGTTGCG CAGCCTGATT GAGGCTGCTC CCTGCAGCTT CAGGAGTGCC
ACCCTGGGCA TAACCGCAAG TTTCGGCACC GTGACCCGTA CCCCTGCCGA CAGCCGCGCC
ATCAACAGCC CGGATCAGCT CCTGAATCTG GCTGACCAAT GTCTGTATGC TGCCAAACAG
GCTGGACGTA ACCGGGTCGT AGCAGCCCAA CGCGAGGGGA CGACGCCATG A
|
|---|
| Protein sequence | MADTGIPILL VDDDRFMRTV LCQTLQDAGY RVSQAANGKE ALELCRSTYF PIILTDWVMP
EMDGIAFCRA FRELAAECYT YLILLTSQEG KEKLIEGLEA GADEYLIKPV NEAELMVRLK
TARRILDLES SLQKSLEEIK QLSIRDALTG AFNRGYLDQH LPHEIRRADR YLRDLSLIMM
DLDHFKKIND TWGHQAGDAV LQHCIRIIAG TIRHEVDWVA RYGGEEFVLV LPETDRTGCR
VVAERLRSLI EAAPCSFRSA TLGITASFGT VTRTPADSRA INSPDQLLNL ADQCLYAAKQ
AGRNRVVAAQ REGTTP
|
|---|
| |