| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_2815 |
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| Symbol | |
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| ID | 5453911 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 3018603 |
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| End bp | 3019976 |
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| Gene Length | 1374 bp |
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| Protein Length | 457 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640878397 |
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| Product | response regulator receiver modulated diguanylate cyclase |
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| Protein accession | YP_001414080 |
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| Protein GI | 154253256 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.631579 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 44 |
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| Fosmid unclonability p-value | 0.0857187 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACTGCGC GCGTACTTAT CGTCGACGAC GTTCCGGCCA ATCTGAAGCT GCTCGACGCG
AAACTCACCG CCGAGTATTT CGACGTGTTC AAGGCCGCGT CGGGGCCGGA GGCGCTGGAG
GCGGCGAAGG AACAGCAGCC GGACATCATT CTTCTCGATG TGATGATGCC GGGCATGGAC
GGGTTCGAGG TCTGTCGCCG GCTGAAGGCG ATGCCGGAGA CGGAACATAT TCCCGTCGTG
ATGGTGACGG CGCTCGACCA GCCGAAAGAC CGGGTGCAGG GGCTGGAAGC CGGCGCCGAC
GATTTTCTTA CAAAGCCGCT CAACGATCTG GCGCTGTTCG CGCGCGTCCG CAGCCTTGTC
CGCCTGAAAA TGGTGACAGA CGAGCTGCGC ATGCGCGAGG CGACGGGGCA GCGCATCGGC
GCGCTGGGCG CGGGGACGAC TGGCGATTTC CTGATGACGG AGCCGGGGCG CATTCTTGCG
ATCGACGACC GGCCGACATC GCTGAAGCGC ATTACCGAGA CGCTGGCGAG CGAACACAAT
GTGACGGTTG CCGAGACGCA GGAAGAGCTG CTGCAGCTCG CCAATAGCGG CAATTTCGAT
CTTCATATCG TGAGCCTGAC GCTGCAGGAA TTCGACGGGC TGCGGCTCTG CTCGCAGCTG
CGCTCGCTGG AAGCGACGCG GCAGACGCCC ATTCTCGCGA TCGTGGAAGA GGGCGATACG
GGGCGCCTGG TGCGCGCGCT CGACATGGGT GTGAACGATT ATCTGGTGCG GCCGGTGGAG
CGCAACGAAC TCGTCGCGCG GGCGCGCAGC CAGCTTCGCC GCAAACGCTA TCAGGATTAT
CTGCGCGACA AGTTCCAGCA GGGGCTCGAA CTCGCGATCA CCGACGGGCT GACCGGGCTC
TATAACCGGC GCTACATGGA AGGCCATCTC GCGACGCTGG TCGACGATGC GGCGAATACC
GGCAAGCCCG TGGCGCTGCT GATTTTCGAC ATCGATTACT TCAAGGCCGT GAACGATACG
CATGGCCACC AGGCGGGCGA CGAGGTGCTG AAGGAATTCG CGGACCGCAT TTCGGCCAAT
GTGCGCGGCA TCGACCTTGC CTGCCGGCTG GGCGGCGAGG AATTCGTCGT GGTGATGCCG
GATACGGACC TCACTTATGC GATGACGGTG GCCGAACGCC TGCGTCAGGG CGTGGCGCTC
CGGCCGTTCA AGCTCGACGA GACGGGGCGG ACGCTCGATG TGACGGTGAG CATCGGTATC
GCGGTGACGG AAGGGCCGAA CGACACGGCG GCGAAGCTGC TCGGCCGCGC CGACCAGGGG
CTCTATCGCG CCAAACGCGA CGGGCGAAAC CGCGTGGTCG CCGAGGCGGC CTGA
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| Protein sequence | MTARVLIVDD VPANLKLLDA KLTAEYFDVF KAASGPEALE AAKEQQPDII LLDVMMPGMD
GFEVCRRLKA MPETEHIPVV MVTALDQPKD RVQGLEAGAD DFLTKPLNDL ALFARVRSLV
RLKMVTDELR MREATGQRIG ALGAGTTGDF LMTEPGRILA IDDRPTSLKR ITETLASEHN
VTVAETQEEL LQLANSGNFD LHIVSLTLQE FDGLRLCSQL RSLEATRQTP ILAIVEEGDT
GRLVRALDMG VNDYLVRPVE RNELVARARS QLRRKRYQDY LRDKFQQGLE LAITDGLTGL
YNRRYMEGHL ATLVDDAANT GKPVALLIFD IDYFKAVNDT HGHQAGDEVL KEFADRISAN
VRGIDLACRL GGEEFVVVMP DTDLTYAMTV AERLRQGVAL RPFKLDETGR TLDVTVSIGI
AVTEGPNDTA AKLLGRADQG LYRAKRDGRN RVVAEAA
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