Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dhaf_1561 |
Symbol | |
ID | 7258530 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfitobacterium hafniense DCB-2 |
Kingdom | Bacteria |
Replicon accession | NC_011830 |
Strand | + |
Start bp | 1666160 |
End bp | 1667527 |
Gene Length | 1368 bp |
Protein Length | 455 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 643561467 |
Product | response regulator receiver modulated diguanylate cyclase |
Protein accession | YP_002458047 |
Protein GI | 219667612 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
TIGRFAM ID | [TIGR00229] PAS domain S-box [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.0000000734361 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGAAGACG TTGATATGAA AAATTTTCTG GAAACGATTG AGGATATGAT CCTCATTATT AATCGGGAAG GAAGATTATT ATATGCAAAT ACTGCCGTGC CTAAGAAGCT GGGCTATCCT CATGAAGGAT TAATGAACAT GCATATCCTG ACCATTACCA GCGCCGGTAA GATGGCTGAA GGTGAAAAGA TCTTAGCTGA GCTGTTTGCG GGCAAAAAAG AAAGTCTCCC TTTGTCCCTG GAAAAAAAGG AGGGAACCTC CATCCCTGCA AAAGCGCGTA TCTGGCAGGG GAAGTGGCAT AATGAGCCTT GTCTTTTTGC CATCATTAAG GATTTGTCAA AAGAAGAAAG AGCTTCTTCA ACCCCATTCC TGGAGCCTGA TGAGATTCAT ACAGGGATCA GCGGGGCGGC TTGGTGCGAA AAGCCTGATT TCGCCAGCGA TATATCCTGT GAGCTAAAAG ATGAAGAACC CTCCAAACCC AGAGTGTTAA TCGTGGATGA TCAGCTTTTT AATTTAAAGC TTTTAGAAAG TGCTCTTAAA GAAGATTACA TCGTGATGAC CGCCGACAAC GGGATTGAGG CCTTAGAGCT GGCCACGGGA AAAAGCCAGC CCGATATTAT CCTGCTGGAT ATTATTATGC CGGTGATGGA TGGCTATGAG GTATGCATTC GTCTGCGGGA AATGCCGGAG ACGCGGGATA TTCCGGTAAT TTTCCTTAGC GCCCTCAAAA ACGAAAAGAA TGAGGAGTAT GCTCTGCAAT TGGGGGTAGT GGATTATATC ACGAAGCCTT TCAGCTTGCC CATCATCAAA GGCCGGCTCC GAAACCATGT GGAGCAAAAG AAATACAGGG ATCGGCAAAA AGAAAATAGC TATATTGATG AATTGACGCA AATCGCCAAT CGCCGGAAAT TCAATGAAAC GGTGACTATA GAGTGGAATC GGGCCAGGCG TAACGGGAAT AGCTTATCCG TATTGATGAT CGATGTGGAT TGTTTTAAAA AGTACAATGA TTTTTACGGT CACTTGGAGG GGGATAAATG CCTCTATAAA ATTGCCCAAA CCTTAAAGTC AAATGTAAAG CGCTCTTCAG ATTTGGTAGC CAGATGGGGC GGGGAAGAGT TTGCCTGCGT TCTTACGGAT ACGGATCGGA TTGGCGCTAT GCTGGTGGGT GAACGTTTGC GCAGGGCTGT CGTCAAGCTG AATATCCCAT CCGAAATTTC CGATGTGGAT AGAGTGGTCA CGGCCAGCAT CGGTGTAGCC ACGGCGTTGC CTTCCGTGGA TAACTCCTTG GAGGAACTGC TGCATAAAGC TGATATGGCT CTATATAAAG CCAAGAAAAC CGGAAGAAAT TGTGTATGCA CGCCATAA
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Protein sequence | MEDVDMKNFL ETIEDMILII NREGRLLYAN TAVPKKLGYP HEGLMNMHIL TITSAGKMAE GEKILAELFA GKKESLPLSL EKKEGTSIPA KARIWQGKWH NEPCLFAIIK DLSKEERASS TPFLEPDEIH TGISGAAWCE KPDFASDISC ELKDEEPSKP RVLIVDDQLF NLKLLESALK EDYIVMTADN GIEALELATG KSQPDIILLD IIMPVMDGYE VCIRLREMPE TRDIPVIFLS ALKNEKNEEY ALQLGVVDYI TKPFSLPIIK GRLRNHVEQK KYRDRQKENS YIDELTQIAN RRKFNETVTI EWNRARRNGN SLSVLMIDVD CFKKYNDFYG HLEGDKCLYK IAQTLKSNVK RSSDLVARWG GEEFACVLTD TDRIGAMLVG ERLRRAVVKL NIPSEISDVD RVVTASIGVA TALPSVDNSL EELLHKADMA LYKAKKTGRN CVCTP
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