| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caul_1497 |
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| Symbol | pleD |
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| ID | 5898952 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Caulobacter sp. K31 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010338 |
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| Strand | + |
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| Start bp | 1590715 |
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| End bp | 1592079 |
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| Gene Length | 1365 bp |
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| Protein Length | 454 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641561984 |
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| Product | response regulator PleD |
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| Protein accession | YP_001683125 |
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| Protein GI | 167645462 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 38 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.122959 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGCGCGC GTATCCTGGT CGTCGATGAC ATCGAGGCCA ATGTCCGCCT GCTCGAGGCC
AAGCTGTCGG CTGAATATTA CCAGGTGTCC GTCGCCTATG ATGGCCCCAC GGCCTTGGCC
ATGGCGGCGG ACGAGTTGCC CGACGTCATC CTGCTGGACG TGATGATGCC CGGCATGGAC
GGCTTCACGG TCTGCCGCAA GCTCAAGGAA GACCCGACCA CCCGCCACAT CCCCGTCGTG
CTGGTCACCG CCCTGGACGG CCGCGCCGAT CGGATCGCCG GCCTGGAGGC GGGTGCCTCC
GACTTCCTGA CCAAGCCGAT CGACGACGTC ATGCTGTTCG CCCGCGTGCG CAGCCTGACC
CGGTTCAAGC TGGTGATCGA CGAACTGCGC CAGCGCGAGG CCTCGGGCCG CCGCATGGGC
GTGATCGCCG GCGCCGCCTC GCGCCTCGAT GGCCTGGGCG GCCGGGTGCT GGTCGTCGAC
GACAACGAGC GCCAGGCCCA GCGCGTGGCC GCCGAACTGG CGGTCGAGCA CCGTCCGGTG
GTCGAATCCG ATCCCGTGAA GGCCCAGATC AGCGCCGGCG GTCCGGTGGA CCTGGTGATC
ATCAACGCCG CCGCCAAGGG CTTCGACGGC CTGCGCTTCG CCGCCAGCCT GCGCTCCGAC
GAGCGCACCC GGCACCTGCC GATCCTGGCC ATGGTCGATA CCGACGATCG CCCGCGCCTG
GTCAAGGCGC TGGAGATCGG CATCAACGAC ATCCTGCCGC GTCCGATCGA CCCGCAGGAG
CTGTCGGCCC GGGTCAAGAC CCAGATCCAG CGCAAGCGCT ACACCGACTA CCTGCGCCAG
AACCTCGACC AGAGCCTGGA ACTGGCGGTC ACCGACCAGC TGACGGGCTT GCACAACCGC
CGCTACATGG CCGGCCAGCT CGACTCGCTG GTCAAGCGCG CGGCCCTCGG CGGCGACCCG
GTGGCGGCCC TGCTGATCGA CATCGATCAC TTCAAGAAGA TCAACGACGG CTTTGGCCAC
GACGTCGGCG ACGAGGTGCT GCGCGAGTTC GCCCTGCGCC TGGCCTCCAA CGTCCGGGCC
ATCGACCTGC CTTGCCGCTA CGGCGGCGAG GAGTTCACGG TGATCATGCC CGACACCCAA
CTGGCCGACG CCCTGCGCAT CGCCGAGCGG ATCCGCATGC ATGTCTCCGG CTCGCCGTTC
CGCGTGGCCC AGGGCAGCGA GCTGCTGACC GTGACCATCT CGATCGGCGT CTCGGCCACC
AGCGGCCCGG GCGACACCCC AGAGACCCTG CTCAAGCGGG CCGACGAAGC GGTGTACGAG
GCCAAGAAGT CTGGGCGCAA CGCGGTGGTG GGGAGGGCGG CTTAG
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| Protein sequence | MSARILVVDD IEANVRLLEA KLSAEYYQVS VAYDGPTALA MAADELPDVI LLDVMMPGMD
GFTVCRKLKE DPTTRHIPVV LVTALDGRAD RIAGLEAGAS DFLTKPIDDV MLFARVRSLT
RFKLVIDELR QREASGRRMG VIAGAASRLD GLGGRVLVVD DNERQAQRVA AELAVEHRPV
VESDPVKAQI SAGGPVDLVI INAAAKGFDG LRFAASLRSD ERTRHLPILA MVDTDDRPRL
VKALEIGIND ILPRPIDPQE LSARVKTQIQ RKRYTDYLRQ NLDQSLELAV TDQLTGLHNR
RYMAGQLDSL VKRAALGGDP VAALLIDIDH FKKINDGFGH DVGDEVLREF ALRLASNVRA
IDLPCRYGGE EFTVIMPDTQ LADALRIAER IRMHVSGSPF RVAQGSELLT VTISIGVSAT
SGPGDTPETL LKRADEAVYE AKKSGRNAVV GRAA
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