Gene Caul_1497 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaul_1497 
SymbolpleD 
ID5898952 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaulobacter sp. K31 
KingdomBacteria 
Replicon accessionNC_010338 
Strand
Start bp1590715 
End bp1592079 
Gene Length1365 bp 
Protein Length454 aa 
Translation table11 
GC content69% 
IMG OID641561984 
Productresponse regulator PleD 
Protein accessionYP_001683125 
Protein GI167645462 
COG category[T] Signal transduction mechanisms 
COG ID[COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain 
TIGRFAM ID[TIGR00254] diguanylate cyclase (GGDEF) domain 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.122959 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCGCGC GTATCCTGGT CGTCGATGAC ATCGAGGCCA ATGTCCGCCT GCTCGAGGCC 
AAGCTGTCGG CTGAATATTA CCAGGTGTCC GTCGCCTATG ATGGCCCCAC GGCCTTGGCC
ATGGCGGCGG ACGAGTTGCC CGACGTCATC CTGCTGGACG TGATGATGCC CGGCATGGAC
GGCTTCACGG TCTGCCGCAA GCTCAAGGAA GACCCGACCA CCCGCCACAT CCCCGTCGTG
CTGGTCACCG CCCTGGACGG CCGCGCCGAT CGGATCGCCG GCCTGGAGGC GGGTGCCTCC
GACTTCCTGA CCAAGCCGAT CGACGACGTC ATGCTGTTCG CCCGCGTGCG CAGCCTGACC
CGGTTCAAGC TGGTGATCGA CGAACTGCGC CAGCGCGAGG CCTCGGGCCG CCGCATGGGC
GTGATCGCCG GCGCCGCCTC GCGCCTCGAT GGCCTGGGCG GCCGGGTGCT GGTCGTCGAC
GACAACGAGC GCCAGGCCCA GCGCGTGGCC GCCGAACTGG CGGTCGAGCA CCGTCCGGTG
GTCGAATCCG ATCCCGTGAA GGCCCAGATC AGCGCCGGCG GTCCGGTGGA CCTGGTGATC
ATCAACGCCG CCGCCAAGGG CTTCGACGGC CTGCGCTTCG CCGCCAGCCT GCGCTCCGAC
GAGCGCACCC GGCACCTGCC GATCCTGGCC ATGGTCGATA CCGACGATCG CCCGCGCCTG
GTCAAGGCGC TGGAGATCGG CATCAACGAC ATCCTGCCGC GTCCGATCGA CCCGCAGGAG
CTGTCGGCCC GGGTCAAGAC CCAGATCCAG CGCAAGCGCT ACACCGACTA CCTGCGCCAG
AACCTCGACC AGAGCCTGGA ACTGGCGGTC ACCGACCAGC TGACGGGCTT GCACAACCGC
CGCTACATGG CCGGCCAGCT CGACTCGCTG GTCAAGCGCG CGGCCCTCGG CGGCGACCCG
GTGGCGGCCC TGCTGATCGA CATCGATCAC TTCAAGAAGA TCAACGACGG CTTTGGCCAC
GACGTCGGCG ACGAGGTGCT GCGCGAGTTC GCCCTGCGCC TGGCCTCCAA CGTCCGGGCC
ATCGACCTGC CTTGCCGCTA CGGCGGCGAG GAGTTCACGG TGATCATGCC CGACACCCAA
CTGGCCGACG CCCTGCGCAT CGCCGAGCGG ATCCGCATGC ATGTCTCCGG CTCGCCGTTC
CGCGTGGCCC AGGGCAGCGA GCTGCTGACC GTGACCATCT CGATCGGCGT CTCGGCCACC
AGCGGCCCGG GCGACACCCC AGAGACCCTG CTCAAGCGGG CCGACGAAGC GGTGTACGAG
GCCAAGAAGT CTGGGCGCAA CGCGGTGGTG GGGAGGGCGG CTTAG
 
Protein sequence
MSARILVVDD IEANVRLLEA KLSAEYYQVS VAYDGPTALA MAADELPDVI LLDVMMPGMD 
GFTVCRKLKE DPTTRHIPVV LVTALDGRAD RIAGLEAGAS DFLTKPIDDV MLFARVRSLT
RFKLVIDELR QREASGRRMG VIAGAASRLD GLGGRVLVVD DNERQAQRVA AELAVEHRPV
VESDPVKAQI SAGGPVDLVI INAAAKGFDG LRFAASLRSD ERTRHLPILA MVDTDDRPRL
VKALEIGIND ILPRPIDPQE LSARVKTQIQ RKRYTDYLRQ NLDQSLELAV TDQLTGLHNR
RYMAGQLDSL VKRAALGGDP VAALLIDIDH FKKINDGFGH DVGDEVLREF ALRLASNVRA
IDLPCRYGGE EFTVIMPDTQ LADALRIAER IRMHVSGSPF RVAQGSELLT VTISIGVSAT
SGPGDTPETL LKRADEAVYE AKKSGRNAVV GRAA