| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_2939 |
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| Symbol | |
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| ID | 3368459 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. syringae B728a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007005 |
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| Strand | - |
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| Start bp | 3526710 |
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| End bp | 3527666 |
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| Gene Length | 957 bp |
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| Protein Length | 318 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637653285 |
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| Product | GGDEF |
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| Protein accession | YP_236011 |
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| Protein GI | 66046170 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.417006 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAACCTG TACCTAGCCT GCTGATTGTC GATGATGATA TTTCCGCCAT TCGCGTATTG
AGCAAAATTC TGAACGGTCT GGGGCAGATT CGTTTTGCCA CGGGCGGTGC CCAGGCCTTG
AAGATGGTCC GGGAAATGCG TCCTGACCTT ATCCTTCTCG ACGCGGAGAT GCCCGGAATG
AGCGGTTTTG AAGTCTGCGA GACGCTCAAG GCTGATCAAT TGCTGGAAGA CGTTCCCGTC
ATCTTCATCA CCAGCCACAC CGAAACCCGT ATCGAGGAAG CCGGACTGGC GCTGGGGGCG
GTGGATTTCA TCGGCAAGCC TATTCAGCCT TTGATCGTCA CGGCGCGAGT AAAGACCCAC
CTGCGCCTGA AAATGGCGAT GGACCAGCTC AACCTGCTGG CCCAGACCGA TGGGCTGACG
GGGCTGGCCA ATCGGCGTTT CCTCGACGAG AGTATCGCGC GCGAATGGCT GCGCATGCGG
CGCAACCAAG GTGCGTTTTC GCTGCTGTTG CTCGACATCG ATTTCTTCAA ACGTTACAAC
GATCACTATG GCCATTTGCA AGGCGATGAG TGCCTGATTG CCATCGCCCA CGCTTTGAAA
AAGTGCGTGC ACAGGTCGAC CGATCTGGTG GCTCGTTATG GGGGCGAGGA GTTTGCCGTG
CTGTTGCCGG ATACCGGGGC AGAGGGCGCC TGTCGTCTGG CGGATGAAAT CGTGCAGCAC
ATTCAAGGCC TCAACAAGCC CCATGAAACC AGTGACTTCG GCCGGGTGAC CGTGTCGGTG
GGGGTAGCAA GTCTGGAGGC TGGTGCGCTG CCCGTCCCGA GCCCGGGCGC TGCAATCGGC
CTTGCGCCTG ACTCGATCGC CATAGCGTTG CTGGCGGAAG CCGACCGGGC CTTGTACCGG
GCCAAGCATG AGGGGCGAAA CTGCAGCCGG TTTGAGCCGA TACAGGTTGC GCCTTGA
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| Protein sequence | MQPVPSLLIV DDDISAIRVL SKILNGLGQI RFATGGAQAL KMVREMRPDL ILLDAEMPGM
SGFEVCETLK ADQLLEDVPV IFITSHTETR IEEAGLALGA VDFIGKPIQP LIVTARVKTH
LRLKMAMDQL NLLAQTDGLT GLANRRFLDE SIAREWLRMR RNQGAFSLLL LDIDFFKRYN
DHYGHLQGDE CLIAIAHALK KCVHRSTDLV ARYGGEEFAV LLPDTGAEGA CRLADEIVQH
IQGLNKPHET SDFGRVTVSV GVASLEAGAL PVPSPGAAIG LAPDSIAIAL LAEADRALYR
AKHEGRNCSR FEPIQVAP
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