| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_1192 |
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| Symbol | |
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| ID | 5746747 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | - |
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| Start bp | 1326875 |
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| End bp | 1327825 |
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| Gene Length | 951 bp |
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| Protein Length | 316 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641296272 |
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| Product | response regulator receiver modulated diguanylate cyclase |
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| Protein accession | YP_001562222 |
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| Protein GI | 160896640 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 37 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCTACT CCGCCTTCCC ACCATCGCTG CCCAACCCGC TACAGCCCTT GCCTGCCGCG
CAAAAGGTGC TGGTGGTGGA CGACGTTCCG GACAACGCCA CCGTCATCTG CCAGGTGATC
AAGGATCTGT GCGGCCCGCT TGTGGCCTAC ACCGGTGAGG AGGCGCTGGC CCTGGCCCAC
CAGCACCAGC CCGACCTCAT CCTGCTGGAC ATCCGCATGC CCGGGATGGA CGGCTTCGAG
GTCTGCCGCC GCCTCAAGGC CGACCTGCAG ACCGCGCATA TCCCCATCAT CTTCCTCACC
GCGCTGACCG AGCCCCATTG CGAGGAACTG GGACTGAACC TGGGCGCCGT GGATTTCGTG
ACCAAGCCCT TTCGCCCGGC CGTTCTCAAG GCACGCGTGC GCACGCATCT GGAGATTGCG
CAGCAGCGCC AGATGCTGCA GCTGCTGTCG CACAGCGACG GGCTGACGGG CGTGGCCAAC
CGGCGTTTCT TCAGTGCCCA GCTGGAGCGC GAGTTCATGC GCCTGCAGCG CCTGGGCGAG
CCGCTGTCGC TGGTGATGAT GGACGTGGAC CACTTCAAGG CCTACAACGA CCACTACGGC
CATCTGGTCG GCGATGAATG CCTGAGCCAG ATCTCCCAGG CCATTCAGGG CGCACTGCAC
CGGCCGGGCG ACCTGCTGGC GCGCTATGGG GGAGAGGAAT TCGTCTGCCT GCTGCCCCAT
ACGGCGCTGG ATGGCGCGGT GCTGGTGGCG CAGGGCATCG TCGATGCGCT CAGGCTGCTG
GACCTGCCCC ATGCCGCCTC GCCCCTGGGC CAGGCGCTGA CCGTGAGCCT GGGCGTGGCC
TGCATTGCGC CTTCGTCCAC CAACAGTGCC CAGCAACTGC TGGCCGATGC CGATCGGCGC
CTTTATCTCG CAAAAAACGC TGGTCGCGAC CGCATCGTCT GGGCTGGGTG A
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| Protein sequence | MPYSAFPPSL PNPLQPLPAA QKVLVVDDVP DNATVICQVI KDLCGPLVAY TGEEALALAH
QHQPDLILLD IRMPGMDGFE VCRRLKADLQ TAHIPIIFLT ALTEPHCEEL GLNLGAVDFV
TKPFRPAVLK ARVRTHLEIA QQRQMLQLLS HSDGLTGVAN RRFFSAQLER EFMRLQRLGE
PLSLVMMDVD HFKAYNDHYG HLVGDECLSQ ISQAIQGALH RPGDLLARYG GEEFVCLLPH
TALDGAVLVA QGIVDALRLL DLPHAASPLG QALTVSLGVA CIAPSSTNSA QQLLADADRR
LYLAKNAGRD RIVWAG
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