Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Noc_0847 |
Symbol | |
ID | 3707152 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrosococcus oceani ATCC 19707 |
Kingdom | Bacteria |
Replicon accession | NC_007484 |
Strand | + |
Start bp | 927948 |
End bp | 928931 |
Gene Length | 984 bp |
Protein Length | 327 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 637737349 |
Product | two component diguanylate cyclase |
Protein accession | YP_342890 |
Protein GI | 77164365 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCTATAC TGGTGGTTGA TGATGACGAA GATCTTGCCC ACTTGCTTGC ACTCCGCCTT CAGTTAGTGG GAGGCTATGA AGTATGCTTG GCCCATTCTG CATCGGCCGC TTTTGAGCGA CTTGGCATAC AGGGTACAGA GGCGGCCGCC AATATCGATC TAATTTTGAT GGATGTGGAA CTACCGGGAA TTAATGGAAT CGAAGCCTGT CGCCGTTTAA AAAGCCACCC TCTAGGGCAA GATATCCCGG TCATCATGAT TACTGGCCAT GATGACCAGG GGAGCTTGGA GGCAGCATTT GAGGCTGGCG CCGTGGATTA TGTGACTAAA CCTTTTGATA ACGCTAGCCT CATGGCGAGG GTTCGTTCTG CCTTGCGTTT AAAGAAAGAA ATTGGGGTTC GCAAGCAGCG GGAGCAGGAG TTATTGGATT TAACCTATCG CCTAGAGGCG GCTAATGAGC AACTGCGCCA GCTAACCTCT CTTGATGATT TGACTGGAAT CGCTAACCGG CGACAATTCG AGGTGACCAT TCATCAAGAG TTTCAGCGTG CGATGCGCAA TAAGACTGTG CTCTCGCTGA TCATGATCGA CATTGATAAC TTTAAGGTTT ATAACGACAT TTATGGTCAT CAGACTGGGG ATAGTTGCTT GCGCCGGGTG GCGGCAGCTC TGGATTCTGT GCTTAAGCGG CCCAATGACT TGCTTGCCCG TTACGGGGGA GAAGAATTTG CTGTTATTCT TCCAGAGACT GGAAGTAAAG GCGCTAGCAA TATAGCTGAA AGCTTGCGCC AGGCGGTAGA AATTCTAAAA ATCCCTCATT CTTATGCTTC CCAAAATAAT TTGCGAGTCA CCGTCAGCTT AGGGGTAGCC ACCCTTATCC CTCAGCGCGG CGATGAACCT ACTAAACTTA TTTCCATAGC GGACCAAGCT CTGTATCAAT CTAAGCATGC CGGGCGCAAT CAAGTATCCG TAGCTGTTAT CTAA
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Protein sequence | MPILVVDDDE DLAHLLALRL QLVGGYEVCL AHSASAAFER LGIQGTEAAA NIDLILMDVE LPGINGIEAC RRLKSHPLGQ DIPVIMITGH DDQGSLEAAF EAGAVDYVTK PFDNASLMAR VRSALRLKKE IGVRKQREQE LLDLTYRLEA ANEQLRQLTS LDDLTGIANR RQFEVTIHQE FQRAMRNKTV LSLIMIDIDN FKVYNDIYGH QTGDSCLRRV AAALDSVLKR PNDLLARYGG EEFAVILPET GSKGASNIAE SLRQAVEILK IPHSYASQNN LRVTVSLGVA TLIPQRGDEP TKLISIADQA LYQSKHAGRN QVSVAVI
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