Gene Sbal223_4132 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbal223_4132 
Symbol 
ID7088455 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS223 
KingdomBacteria 
Replicon accessionNC_011663 
Strand
Start bp4903134 
End bp4904066 
Gene Length933 bp 
Protein Length310 aa 
Translation table11 
GC content45% 
IMG OID643463011 
Productresponse regulator receiver modulated diguanylate cyclase 
Protein accessionYP_002360026 
Protein GI217975275 
COG category[T] Signal transduction mechanisms 
COG ID[COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain 
TIGRFAM ID[TIGR00254] diguanylate cyclase (GGDEF) domain 


Plasmid Coverage information

Num covering plasmid clones47 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones63 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCATCTTG CAGAATTAAT TGCTCGGCCC CAAAGTGAGA AAGGTAAGAT CCTCATCGTT 
GATGATCAGC CGCTCAATAT CAAAATACTG CATCAACTCT TCAATGAAGA GTATGAGTTG
TTTATGGCGA CCAATGGTGA GCAGGCGATA GCCATATGCC AGAAGGTACA GCCAGATTTA
GTGCTGTTAG ACATTGAAAT GCCTGGTATG TCGGGTTTTG ACGTTTGCCA ACATCTTAAA
GCCGACCCTG AAACCGCGAC TATTGGGGTT ATTTTTGTTA CGGCTCATTT TGATGAAGTG
CAAGAAGTTA AAGGTTTTCA GCTGGGAGCA GTCGATTTTA TCCATAAACC TATCAATCCA
ATTATCACTA CTGCGCGGGT AAAAAATCAG TTTACCCTCA AGCGACAATC CGATCTGTTG
CATTCCATCG CGCTGCTTGA CAGTTTAACG GGTGTCGCTA ATCGACGTCA GTTTGAGCAG
CGACTTCCTG AAATATGGAA ACATTGCTGC CGCAACGAGT TAGCCTTATC AGTGGTGATG
CTAGATGTGG ATTTTTTTAA ACGTTTTAAT GATCGTTATG GTCATCAGGA AGGCGACCAA
TGTTTGCGAC AAGTTGCAAA AGCCATAAGC GATTCTCTGC AGCGCGCGAC TGACTTTGTT
GCACGTTATG GCGGGGAGGA GTTTATTTGT ATTCTGCCAG AAACCAAGCT TGCCGGTGCC
ATTCATACGG CACAGAAAAT AGTGAATGCA GTACAAGCTT TGCATCTTGA ACATCTCGAG
TCGAGCTTCC AAGATGTGAC GATTAGTGCG GGTGTCGCGA GCGTGCTACC CAAAAGTGAT
TTGACTTGGC AAACACTGAT CGAAACAGCG GACCAGCAAT TGTACTTGGC GAAAGAGAGT
GGACGTAACC AAGTAGTGGG CCTAGGGCTT TAG
 
Protein sequence
MHLAELIARP QSEKGKILIV DDQPLNIKIL HQLFNEEYEL FMATNGEQAI AICQKVQPDL 
VLLDIEMPGM SGFDVCQHLK ADPETATIGV IFVTAHFDEV QEVKGFQLGA VDFIHKPINP
IITTARVKNQ FTLKRQSDLL HSIALLDSLT GVANRRQFEQ RLPEIWKHCC RNELALSVVM
LDVDFFKRFN DRYGHQEGDQ CLRQVAKAIS DSLQRATDFV ARYGGEEFIC ILPETKLAGA
IHTAQKIVNA VQALHLEHLE SSFQDVTISA GVASVLPKSD LTWQTLIETA DQQLYLAKES
GRNQVVGLGL