| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_0828 |
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| Symbol | |
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| ID | 6115062 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 1115077 |
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| End bp | 1116051 |
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| Gene Length | 975 bp |
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| Protein Length | 324 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 641632313 |
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| Product | response regulator receiver modulated diguanylate cyclase |
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| Protein accession | YP_001759218 |
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| Protein GI | 170725192 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACGAAT ATCTCAACAC AGGGTTAAGT ATTAAAGATG TCAATGAGCC TCAATTTGTT
ATCAAGGAAG ATCTAGATAA AATCTTAATT ATTGACGATG CTAGAGACAA TCGAGCACTA
TTATCAGAGC TATTAATGCC TGAATATAAA GTTCTTTTAG CTAAAGATGG CGTACAAGGT
CTTAATCTTG CCTGTAAACA TAGTCCAGAT TTAATCTTGT TAGATGTGAT CATGCCTGGC
ATCAATGGTT ATCAAGTCAT CAAATCCCTG AAAAGCGATG AATCGACAAT GGACATCCCC
GTCATCTTCA TCTCCTCGAA AATATCAACT GAAGATGAGA AAATCGGCTT AGATCTTGGT
GCCGTTGACT ATATCACTAA GCCTTTTCAC CCCCCAATTG TGCAAGCTAG GGTACGTAAT
CATCTACTGG GACAGCGTCA CAAGAACCTA CTTGAGCAAC TCGCTCTCGT TGACAGCTTA
ACTGAAGTAT ATAACCGCCG ATTCTATGAG TTAGATATTA GAAAGGTGTG GAGCGCCTGT
AATCGAAACG ACACTGAACT ATCTATCGCC ATGATCGATA TCGACTTTTT CAAAAGTTAT
AATGATGATT ACGGACATCT AAGTGGGGAT AATGCCCTCC GCCTTGTCGC CAGTCACATC
AAAAAACAGC TGAAACGTCC CCATGATGTC ATTGCACGCT ACGGTGGAGA GGAGTTTGCG
ATAATTTTGC CAAACACGAA TGCTGAAAGT GCCCGTAACC TATTATCTAA TATCTGCAGA
TCTGTCGAAA ACCTACAGGT CGAACACGAT TCATCATCAA TCTCCCACTA CTTAACCATC
AGCGTTGGTG GCGCATCAAC GATCCCCAGC AGAGATGCCG ATCATGAGTC ATTTTTGAAA
GTTGTAGATG AGCATCTATA CCAAGCTAAA GCCCAAGGAA GAAACAAAGT ATGTTGGAAG
GAGTCAAGAG AGTGA
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| Protein sequence | MDEYLNTGLS IKDVNEPQFV IKEDLDKILI IDDARDNRAL LSELLMPEYK VLLAKDGVQG
LNLACKHSPD LILLDVIMPG INGYQVIKSL KSDESTMDIP VIFISSKIST EDEKIGLDLG
AVDYITKPFH PPIVQARVRN HLLGQRHKNL LEQLALVDSL TEVYNRRFYE LDIRKVWSAC
NRNDTELSIA MIDIDFFKSY NDDYGHLSGD NALRLVASHI KKQLKRPHDV IARYGGEEFA
IILPNTNAES ARNLLSNICR SVENLQVEHD SSSISHYLTI SVGGASTIPS RDADHESFLK
VVDEHLYQAK AQGRNKVCWK ESRE
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