Gene Mmar10_1277 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmar10_1277 
Symbol 
ID4284003 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMaricaulis maris MCS10 
KingdomBacteria 
Replicon accessionNC_008347 
Strand
Start bp1388217 
End bp1389581 
Gene Length1365 bp 
Protein Length454 aa 
Translation table11 
GC content64% 
IMG OID638140756 
Productresponse regulator receiver modulated diguanylate cyclase 
Protein accessionYP_756507 
Protein GI114569827 
COG category[T] Signal transduction mechanisms 
COG ID[COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain 
TIGRFAM ID[TIGR00254] diguanylate cyclase (GGDEF) domain 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.410696 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value0.0388481 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGCAA GAATTCTCGT CGTGGACGAT CAGGCCGCCA ATGTCCGGCT GCTTGAAGCC 
CGTCTCCAGG CTGAATATTT TGAGGTTTGC ACAGCGACCA ACGGCGCCGA CGCGATCGCC
GTGGCCAAGG CTGAACAACC TGACCTGATC CTGCTCGATG TCATGATGCC GGTGATGGAC
GGGTATGACA CCTGTTCGCG GATCAAGGAT GACCCCGCAA CCCGCCACAT CCCGGTTGTG
ATGGTGACCG CGCTGGACCA GCGCGAAGAC CGCATCCGAG GCCTTGAAGC CGGCGCCGAT
GATTTTCTGA CCAAGCCGAT CGATGATGTC AGCATGTTTG CCCGCATCCG CAGCCTGTTG
CGGCTCAAGG AGGTGCTGGA TGAGCTGCGC TACCGCGAGT CCAGTTCGGC GTTGGCGGGT
ATTTCCGGTG ATGTGCAGGA CGATATCGAC GCACCGGCCC GCGTGGTCGT CGTCAGCGCC
GACCCGCGTG CGACCTGCCG CTTTGCTGCG GCGCTTCCGT CGAAGGCCGA GATCCTGGAA
ACCCACGATC CTGCCGAGGC GATCATCGCT GCCCGCAATG ACGCCGACCT GTTGATCGTC
GACCTGACCT CACCGGGCTA TGACGGGCTG CGCCTGTGCG CGCGGATCCG GTCAGATGCC
GCGACGCGGC AGCTGCCGAT CCTGGCTGTG GTTCGTCCGG CGGATGTCCA GCAGGCTGTG
CGCGCGCTCG ATCTGGGCGT GAATGACATT ATCCAGCGGC CGGTTGATGC CGGCGAGCTG
GCAGCGCGCT CTCGTACCCA GCTGCGCCGC AAGCGCTATG CCGACCAGTT GCGGTCGCAT
CTCGATGAAG GCATGGAGAT GGCGGTCACT GACGCGCTGA CCGGCCTGCA CAATCGTCGT
TACATCTCGT CGCGCCTGCG GCAGGCGATG GACAGCGCCA GCAATGGTGG CGCGCCGGTT
TCCCTGCTTC TCGCCGATAT CGACCATTTC AAGCACATCA ACGACACTTA CGGCCATGAT
GCCGGTGACC GTGTCCTGCG CGATTTTTCA TCCCGCTTGC AGACCGGCCT GCGGGCGCTC
GATCTGGCGG CCCGCTATGG TGGCGAAGAA TTTGTCGTTG TCATGCCCGG GGCGGGGCTG
GCCGAGGCGC GCATAGCGGC CGAGCGGCTG CGGAGCAGTA TCGACGGTTC TGGCTTTGAT
CTGTCGGACG GCACAAGCGT GCCGGTGACG GTCAGTATCG GCATCGCCCA GGCCCATCGC
GGCGAGGCGC TGGATGCCCT GCTGCGGCGT GCTGACGAGG CGCTCTATGC AGCCAAGACT
GCCGGCCGGA ATCAAGTTCA GGCCGCGGAC AACGCCGCGG CCTGA
 
Protein sequence
MSARILVVDD QAANVRLLEA RLQAEYFEVC TATNGADAIA VAKAEQPDLI LLDVMMPVMD 
GYDTCSRIKD DPATRHIPVV MVTALDQRED RIRGLEAGAD DFLTKPIDDV SMFARIRSLL
RLKEVLDELR YRESSSALAG ISGDVQDDID APARVVVVSA DPRATCRFAA ALPSKAEILE
THDPAEAIIA ARNDADLLIV DLTSPGYDGL RLCARIRSDA ATRQLPILAV VRPADVQQAV
RALDLGVNDI IQRPVDAGEL AARSRTQLRR KRYADQLRSH LDEGMEMAVT DALTGLHNRR
YISSRLRQAM DSASNGGAPV SLLLADIDHF KHINDTYGHD AGDRVLRDFS SRLQTGLRAL
DLAARYGGEE FVVVMPGAGL AEARIAAERL RSSIDGSGFD LSDGTSVPVT VSIGIAQAHR
GEALDALLRR ADEALYAAKT AGRNQVQAAD NAAA