Gene Dd703_3123 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDd703_3123 
Symbol 
ID8088420 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDickeya dadantii Ech703 
KingdomBacteria 
Replicon accessionNC_012880 
Strand
Start bp3660336 
End bp3661274 
Gene Length939 bp 
Protein Length312 aa 
Translation table11 
GC content54% 
IMG OID644837198 
Productresponse regulator receiver modulated diguanylate cyclase 
Protein accessionYP_002988710 
Protein GI242240529 
COG category[T] Signal transduction mechanisms 
COG ID[COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain 
TIGRFAM ID[TIGR00254] diguanylate cyclase (GGDEF) domain 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTGGAAAA ATATGCTTGA GCAATATGGG CAAAAAGGGA TGAAACCCAA GGTGCTGATC 
GTCGACGATC AACCGATCAA TATCCGGATT CTGCATGAGG TATTCACCGA ACAATTTGAT
GTGTTGATGG CGACCAGCGG CGAAAAAGCG CTGGAGCAGG TGCGTACTCA AACACCGGAT
CTGATCCTGC TGGATATCGT GATGCCTGGC ATGGATGGCT ACGAGGTGTG TCGGCGTTTA
AAAGCCGACC CACTTACCGA ACTGATCCCT GTCATTTTTA TTACGTCTCA GACCGAGGCG
GAGGTGGAAG CCTATGGGTT TGAGGTAGGC GCGGCGGATT TTATTTCTAA ACCGATTAAT
CCAGCAGTGG TTCGCGCACG GGTGATGACG CAACTCACCC TGAAACTGTA TATGGACAAC
ATGCGCGATA TTGCCTGGAT TGACGGGTTG ACCGGGTTGG CGAACCGGCG GCGTTTCGAT
GAGATGTTGC CGGGGTACTG GCAGGTTTGT CGTCGGGAGC GCCGTCCTAT CGCGTTGTTG
ATGCTGGATG TGGATTTCTT CAAACGTTAC AACGATAGCT ATGGGCATCA GGCTGGCGAT
GATTGTCTAC GCCAGGTCGC CACGGCGATA CAGCAGAATA TTCGTCGCCC GATGGATATG
TGCTTTCGGT ATGGCGGGGA GGAGTTCGCT TGTTTATTGC CGTTTACCGA TCTGGCGGGC
GCCTGTCAGC GTGCCGGAGC CATTCTCGAC ACCGTCCGGC AGTTGGCGAT CCCGCATCGC
GCCTCAGAGA TCAGCGATTC CATTACATTG AGTATTGGTG TGGATTGCCA GATCCCTCAC
CGTGAGGACG GGTGGAACCT GTTGTTGCGT AATGCGGATA CTGCGCTTTA TCAGGGCAAG
GCTCTGGGGC GGGACCGGTG GGTGAGTTTT ACCTCGTAG
 
Protein sequence
MWKNMLEQYG QKGMKPKVLI VDDQPINIRI LHEVFTEQFD VLMATSGEKA LEQVRTQTPD 
LILLDIVMPG MDGYEVCRRL KADPLTELIP VIFITSQTEA EVEAYGFEVG AADFISKPIN
PAVVRARVMT QLTLKLYMDN MRDIAWIDGL TGLANRRRFD EMLPGYWQVC RRERRPIALL
MLDVDFFKRY NDSYGHQAGD DCLRQVATAI QQNIRRPMDM CFRYGGEEFA CLLPFTDLAG
ACQRAGAILD TVRQLAIPHR ASEISDSITL SIGVDCQIPH REDGWNLLLR NADTALYQGK
ALGRDRWVSF TS