Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dd703_3123 |
Symbol | |
ID | 8088420 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dickeya dadantii Ech703 |
Kingdom | Bacteria |
Replicon accession | NC_012880 |
Strand | - |
Start bp | 3660336 |
End bp | 3661274 |
Gene Length | 939 bp |
Protein Length | 312 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 644837198 |
Product | response regulator receiver modulated diguanylate cyclase |
Protein accession | YP_002988710 |
Protein GI | 242240529 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTGGAAAA ATATGCTTGA GCAATATGGG CAAAAAGGGA TGAAACCCAA GGTGCTGATC GTCGACGATC AACCGATCAA TATCCGGATT CTGCATGAGG TATTCACCGA ACAATTTGAT GTGTTGATGG CGACCAGCGG CGAAAAAGCG CTGGAGCAGG TGCGTACTCA AACACCGGAT CTGATCCTGC TGGATATCGT GATGCCTGGC ATGGATGGCT ACGAGGTGTG TCGGCGTTTA AAAGCCGACC CACTTACCGA ACTGATCCCT GTCATTTTTA TTACGTCTCA GACCGAGGCG GAGGTGGAAG CCTATGGGTT TGAGGTAGGC GCGGCGGATT TTATTTCTAA ACCGATTAAT CCAGCAGTGG TTCGCGCACG GGTGATGACG CAACTCACCC TGAAACTGTA TATGGACAAC ATGCGCGATA TTGCCTGGAT TGACGGGTTG ACCGGGTTGG CGAACCGGCG GCGTTTCGAT GAGATGTTGC CGGGGTACTG GCAGGTTTGT CGTCGGGAGC GCCGTCCTAT CGCGTTGTTG ATGCTGGATG TGGATTTCTT CAAACGTTAC AACGATAGCT ATGGGCATCA GGCTGGCGAT GATTGTCTAC GCCAGGTCGC CACGGCGATA CAGCAGAATA TTCGTCGCCC GATGGATATG TGCTTTCGGT ATGGCGGGGA GGAGTTCGCT TGTTTATTGC CGTTTACCGA TCTGGCGGGC GCCTGTCAGC GTGCCGGAGC CATTCTCGAC ACCGTCCGGC AGTTGGCGAT CCCGCATCGC GCCTCAGAGA TCAGCGATTC CATTACATTG AGTATTGGTG TGGATTGCCA GATCCCTCAC CGTGAGGACG GGTGGAACCT GTTGTTGCGT AATGCGGATA CTGCGCTTTA TCAGGGCAAG GCTCTGGGGC GGGACCGGTG GGTGAGTTTT ACCTCGTAG
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Protein sequence | MWKNMLEQYG QKGMKPKVLI VDDQPINIRI LHEVFTEQFD VLMATSGEKA LEQVRTQTPD LILLDIVMPG MDGYEVCRRL KADPLTELIP VIFITSQTEA EVEAYGFEVG AADFISKPIN PAVVRARVMT QLTLKLYMDN MRDIAWIDGL TGLANRRRFD EMLPGYWQVC RRERRPIALL MLDVDFFKRY NDSYGHQAGD DCLRQVATAI QQNIRRPMDM CFRYGGEEFA CLLPFTDLAG ACQRAGAILD TVRQLAIPHR ASEISDSITL SIGVDCQIPH REDGWNLLLR NADTALYQGK ALGRDRWVSF TS
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