More than 300 homologs were found in PanDaTox collection
for query gene VEA_001368 on replicon NC_013457
Organism: Vibrio sp. Ex25



Page 1 of 3    << first  < prev  1  2  3    next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013457  VEA_001368  methyl-accepting chemotaxis protein  100 
 
 
519 aa  1049    Vibrio sp. Ex25  Bacteria  normal  0.237865  n/a   
 
 
-
 
NC_009831  Ssed_4404  methyl-accepting chemotaxis sensory transducer  46.31 
 
 
638 aa  291  2e-77  Shewanella sediminis HAW-EB3  Bacteria  normal  normal  0.0156105 
 
 
-
 
NC_009092  Shew_0085  methyl-accepting chemotaxis sensory transducer  39.57 
 
 
638 aa  290  4e-77  Shewanella loihica PV-4  Bacteria  normal  0.0647334  normal 
 
 
-
 
NC_007954  Sden_0099  chemotaxis sensory transducer  46.15 
 
 
639 aa  289  1e-76  Shewanella denitrificans OS217  Bacteria  unclonable  0.0000000152719  n/a   
 
 
-
 
NC_008345  Sfri_0080  methyl-accepting chemotaxis sensory transducer  44.48 
 
 
636 aa  285  1.0000000000000001e-75  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_009456  VC0395_1102  methyl-accepting chemotaxis protein  43.59 
 
 
638 aa  284  3.0000000000000004e-75  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_010506  Swoo_4795  methyl-accepting chemotaxis sensory transducer  39.28 
 
 
638 aa  282  9e-75  Shewanella woodyi ATCC 51908  Bacteria  normal  0.884167  hitchhiker  0.000462611 
 
 
-
 
NC_008700  Sama_3522  putative methyl-accepting chemotaxis sensory transducer  40.13 
 
 
636 aa  273  7e-72  Shewanella amazonensis SB2B  Bacteria  normal  normal 
 
 
-
 
NC_013457  VEA_001273  methyl-accepting chemotaxis protein  43.7 
 
 
638 aa  272  1e-71  Vibrio sp. Ex25  Bacteria  normal  n/a   
 
 
-
 
NC_009784  VIBHAR_05150  adenylyl cyclase class-3/4/guanylyl cyclase  45.33 
 
 
650 aa  266  8.999999999999999e-70  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_008321  Shewmr4_0271  methyl-accepting chemotaxis sensory transducer  45.45 
 
 
638 aa  265  1e-69  Shewanella sp. MR-4  Bacteria  normal  0.758035  hitchhiker  0.0000678809 
 
 
-
 
NC_008577  Shewana3_0272  methyl-accepting chemotaxis sensory transducer  45.45 
 
 
638 aa  265  1e-69  Shewanella sp. ANA-3  Bacteria  decreased coverage  0.00090491  hitchhiker  0.000000349734 
 
 
-
 
NC_008322  Shewmr7_3750  methyl-accepting chemotaxis sensory transducer  45.45 
 
 
638 aa  265  2e-69  Shewanella sp. MR-7  Bacteria  normal  0.666265  normal  0.186245 
 
 
-
 
NC_009438  Sputcn32_0387  methyl-accepting chemotaxis sensory transducer  45.93 
 
 
638 aa  264  4e-69  Shewanella putrefaciens CN-32  Bacteria  normal  0.408395  n/a   
 
 
-
 
NC_009665  Shew185_0275  methyl-accepting chemotaxis sensory transducer  45.17 
 
 
638 aa  262  1e-68  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_011663  Sbal223_0279  methyl-accepting chemotaxis sensory transducer  45.17 
 
 
638 aa  262  1e-68  Shewanella baltica OS223  Bacteria  normal  0.983838  normal 
 
 
-
 
NC_009997  Sbal195_0283  methyl-accepting chemotaxis sensory transducer  45.17 
 
 
638 aa  262  1e-68  Shewanella baltica OS195  Bacteria  normal  0.411591  normal 
 
 
-
 
NC_009052  Sbal_0282  methyl-accepting chemotaxis sensory transducer  45.17 
 
 
641 aa  261  2e-68  Shewanella baltica OS155  Bacteria  normal  0.0149105  n/a   
 
 
-
 
NC_004347  SO_4454  methyl-accepting chemotaxis protein  42.93 
 
 
642 aa  256  9e-67  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_008345  Sfri_1939  methyl-accepting chemotaxis sensory transducer  41.69 
 
 
638 aa  253  5.000000000000001e-66  Shewanella frigidimarina NCIMB 400  Bacteria  normal  0.573171  n/a   
 
 
-
 
NC_003910  CPS_4964  methyl-accepting chemotaxis protein  44.12 
 
 
545 aa  253  8.000000000000001e-66  Colwellia psychrerythraea 34H  Bacteria  normal  n/a   
 
 
-
 
NC_008340  Mlg_1937  methyl-accepting chemotaxis sensory transducer  40.37 
 
 
541 aa  244  1.9999999999999999e-63  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  0.158854  normal  0.960341 
 
 
-
 
NC_009656  PSPA7_4877  chemotactic transducer PctB  35.84 
 
 
629 aa  240  5e-62  Pseudomonas aeruginosa PA7  Bacteria  normal  0.164155  n/a   
 
 
-
 
NC_004347  SO_2240  methyl-accepting chemotaxis protein  35.96 
 
 
545 aa  238  1e-61  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_008463  PA14_56010  chemotactic transducer PctB  35.62 
 
 
629 aa  238  1e-61  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_008577  Shewana3_2254  methyl-accepting chemotaxis sensory transducer  35.6 
 
 
545 aa  237  3e-61  Shewanella sp. ANA-3  Bacteria  normal  normal  0.492 
 
 
-
 
NC_011138  MADE_00464  methyl-accepting chemotaxis protein  39.19 
 
 
636 aa  237  4e-61  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  n/a   
 
 
-
 
NC_008321  Shewmr4_1767  methyl-accepting chemotaxis sensory transducer  35.75 
 
 
545 aa  234  4.0000000000000004e-60  Shewanella sp. MR-4  Bacteria  normal  0.381763  normal 
 
 
-
 
NC_008322  Shewmr7_1845  methyl-accepting chemotaxis sensory transducer  35.82 
 
 
545 aa  234  4.0000000000000004e-60  Shewanella sp. MR-7  Bacteria  normal  normal 
 
 
-
 
NC_008463  PA14_55960  chemotactic transducer PctC  40.52 
 
 
632 aa  233  8.000000000000001e-60  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.289325  normal 
 
 
-
 
NC_004578  PSPTO_3379  methyl-accepting chemotaxis protein  39.71 
 
 
559 aa  233  9e-60  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_008789  Hhal_0167  methyl-accepting chemotaxis sensory transducer  39.89 
 
 
540 aa  232  1e-59  Halorhodospira halophila SL1  Bacteria  normal  n/a   
 
 
-
 
NC_009656  PSPA7_4874  chemotactic transducer PctC  40.23 
 
 
632 aa  231  2e-59  Pseudomonas aeruginosa PA7  Bacteria  normal  0.153332  n/a   
 
 
-
 
NC_011663  Sbal223_2000  methyl-accepting chemotaxis sensory transducer with Cache sensor  35.38 
 
 
545 aa  231  2e-59  Shewanella baltica OS223  Bacteria  normal  hitchhiker  0.0000194984 
 
 
-
 
NC_009665  Shew185_2347  methyl-accepting chemotaxis sensory transducer  35.38 
 
 
545 aa  231  3e-59  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_009052  Sbal_2358  methyl-accepting chemotaxis sensory transducer  35.38 
 
 
545 aa  231  3e-59  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_009997  Sbal195_2463  methyl-accepting chemotaxis sensory transducer  35.38 
 
 
545 aa  231  3e-59  Shewanella baltica OS195  Bacteria  normal  0.0650014  normal  0.35347 
 
 
-
 
NC_011901  Tgr7_1963  putative methyl-accepting chemotaxis sensory transducer  41.79 
 
 
637 aa  231  3e-59  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.870205  n/a   
 
 
-
 
NC_008789  Hhal_0443  methyl-accepting chemotaxis sensory transducer  37.56 
 
 
541 aa  229  7e-59  Halorhodospira halophila SL1  Bacteria  normal  n/a   
 
 
-
 
NC_008463  PA14_61300  putative chemotaxis transducer  39.44 
 
 
712 aa  229  7e-59  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal  0.862971 
 
 
-
 
NC_009654  Mmwyl1_4029  methyl-accepting chemotaxis sensory transducer  35.59 
 
 
630 aa  229  1e-58  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_009656  PSPA7_5279  putative chemotaxis transducer  39.15 
 
 
712 aa  229  1e-58  Pseudomonas aeruginosa PA7  Bacteria  normal  0.0493383  n/a   
 
 
-
 
NC_009438  Sputcn32_2116  methyl-accepting chemotaxis sensory transducer  37.63 
 
 
545 aa  226  5.0000000000000005e-58  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_008340  Mlg_1098  methyl-accepting chemotaxis sensory transducer  38.79 
 
 
637 aa  226  9e-58  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  0.0167241  normal 
 
 
-
 
NC_009656  PSPA7_2548  putative chemotaxis transducer  42.43 
 
 
561 aa  225  1e-57  Pseudomonas aeruginosa PA7  Bacteria  normal  0.271227  n/a   
 
 
-
 
NC_009654  Mmwyl1_0969  methyl-accepting chemotaxis sensory transducer  33.55 
 
 
631 aa  226  1e-57  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_009439  Pmen_2000  methyl-accepting chemotaxis sensory transducer  40.43 
 
 
560 aa  225  2e-57  Pseudomonas mendocina ymp  Bacteria  normal  0.0144557  normal  0.0324669 
 
 
-
 
NC_008463  PA14_29800  putative chemotaxis transducer  42.43 
 
 
561 aa  225  2e-57  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  decreased coverage  0.00431462  normal 
 
 
-
 
NC_008577  Shewana3_3611  methyl-accepting chemotaxis sensory transducer  41.25 
 
 
634 aa  225  2e-57  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_002939  GSU1033  methyl-accepting chemotaxis protein  36.66 
 
 
533 aa  224  4e-57  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_009438  Sputcn32_0619  methyl-accepting chemotaxis sensory transducer  38.95 
 
 
634 aa  223  4e-57  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_009439  Pmen_3309  methyl-accepting chemotaxis sensory transducer  35.1 
 
 
625 aa  224  4e-57  Pseudomonas mendocina ymp  Bacteria  normal  normal  0.776822 
 
 
-
 
NC_009831  Ssed_2412  methyl-accepting chemotaxis sensory transducer  39.01 
 
 
545 aa  224  4e-57  Shewanella sediminis HAW-EB3  Bacteria  normal  0.516535  hitchhiker  0.00000653474 
 
 
-
 
NC_004347  SO_4053  methyl-accepting chemotaxis protein  40.99 
 
 
634 aa  223  7e-57  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_009439  Pmen_3669  methyl-accepting chemotaxis sensory transducer  39.7 
 
 
716 aa  223  8e-57  Pseudomonas mendocina ymp  Bacteria  normal  0.170337  normal 
 
 
-
 
NC_013889  TK90_1029  methyl-accepting chemotaxis sensory transducer  40.46 
 
 
411 aa  222  9.999999999999999e-57  Thioalkalivibrio sp. K90mix  Bacteria  normal  normal 
 
 
-
 
NC_010322  PputGB1_1880  methyl-accepting chemotaxis sensory transducer with Cache sensor  35.48 
 
 
628 aa  222  9.999999999999999e-57  Pseudomonas putida GB-1  Bacteria  normal  0.454316  normal 
 
 
-
 
NC_010506  Swoo_0808  methyl-accepting chemotaxis sensory transducer  38.92 
 
 
541 aa  222  9.999999999999999e-57  Shewanella woodyi ATCC 51908  Bacteria  normal  normal 
 
 
-
 
NC_008740  Maqu_2346  methyl-accepting chemotaxis sensory transducer  37.7 
 
 
564 aa  222  9.999999999999999e-57  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_002939  GSU1030  methyl-accepting chemotaxis protein  35.34 
 
 
549 aa  221  1.9999999999999999e-56  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_009512  Pput_3489  methyl-accepting chemotaxis sensory transducer  39.28 
 
 
628 aa  221  1.9999999999999999e-56  Pseudomonas putida F1  Bacteria  normal  0.228387  normal 
 
 
-
 
NC_009457  VC0395_A2659  methyl-accepting chemotaxis protein  36.69 
 
 
556 aa  221  1.9999999999999999e-56  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_007912  Sde_2316  putative methyl-accepting chemotaxis sensory transducer  34.13 
 
 
548 aa  221  1.9999999999999999e-56  Saccharophagus degradans 2-40  Bacteria  normal  normal  0.0208981 
 
 
-
 
NC_008345  Sfri_1770  methyl-accepting chemotaxis sensory transducer  36.27 
 
 
538 aa  221  1.9999999999999999e-56  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_007492  Pfl01_0124  chemotaxis sensory transducer, Cache sensor  40.17 
 
 
626 aa  221  3e-56  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.201174  normal 
 
 
-
 
NC_002947  PP_2249  methyl-accepting chemotaxis transducer  39.28 
 
 
643 aa  220  3.9999999999999997e-56  Pseudomonas putida KT2440  Bacteria  normal  0.477129  normal  0.786945 
 
 
-
 
NC_007912  Sde_0081  putative methyl-accepting chemotaxis sensory transducer  40.79 
 
 
544 aa  220  5e-56  Saccharophagus degradans 2-40  Bacteria  normal  normal 
 
 
-
 
NC_013457  VEA_000971  methyl-accepting chemotaxis protein  38.07 
 
 
553 aa  220  5e-56  Vibrio sp. Ex25  Bacteria  normal  0.370017  n/a   
 
 
-
 
NC_007492  Pfl01_3768  chemotaxis sensory transducer  41.19 
 
 
560 aa  220  6e-56  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_007492  Pfl01_0354  chemotaxis sensory transducer, Cache sensor  38.5 
 
 
630 aa  219  7e-56  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_007492  Pfl01_0450  chemotaxis sensory transducer  39.41 
 
 
645 aa  219  7.999999999999999e-56  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_009483  Gura_2845  methyl-accepting chemotaxis sensory transducer  36.93 
 
 
549 aa  219  7.999999999999999e-56  Geobacter uraniireducens Rf4  Bacteria  hitchhiker  0.000000597879  n/a   
 
 
-
 
NC_008463  PA14_56000  chemotactic transducer PctA  35.14 
 
 
629 aa  219  7.999999999999999e-56  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.0512673  normal 
 
 
-
 
NC_008577  Shewana3_3299  methyl-accepting chemotaxis sensory transducer  37.89 
 
 
554 aa  219  7.999999999999999e-56  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_009439  Pmen_2154  methyl-accepting chemotaxis sensory transducer  35.49 
 
 
627 aa  219  1e-55  Pseudomonas mendocina ymp  Bacteria  normal  0.0789614  normal  0.507372 
 
 
-
 
NC_009656  PSPA7_4876  chemotactic transducer PctA  35.36 
 
 
629 aa  218  2e-55  Pseudomonas aeruginosa PA7  Bacteria  normal  0.647167  n/a   
 
 
-
 
NC_007492  Pfl01_4715  chemotaxis sensory transducer  38.92 
 
 
713 aa  218  2e-55  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.233277  normal  0.171171 
 
 
-
 
NC_009439  Pmen_2650  methyl-accepting chemotaxis sensory transducer  40.57 
 
 
568 aa  218  2e-55  Pseudomonas mendocina ymp  Bacteria  normal  normal 
 
 
-
 
NC_008322  Shewmr7_3199  methyl-accepting chemotaxis sensory transducer  37.89 
 
 
554 aa  218  2e-55  Shewanella sp. MR-7  Bacteria  normal  normal  0.927661 
 
 
-
 
NC_009831  Ssed_4463  methyl-accepting chemotaxis sensory transducer  39.09 
 
 
552 aa  218  2e-55  Shewanella sediminis HAW-EB3  Bacteria  normal  normal  0.43301 
 
 
-
 
NC_007492  Pfl01_4431  chemotaxis sensory transducer, Cache sensor  33.9 
 
 
629 aa  217  4e-55  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_011138  MADE_03718  putative chemotaxis sensory protein  40.13 
 
 
540 aa  217  4e-55  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  n/a   
 
 
-
 
NC_009784  VIBHAR_04784  histidine kinase  38.71 
 
 
628 aa  217  4e-55  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_008321  Shewmr4_0824  methyl-accepting chemotaxis sensory transducer  37.47 
 
 
554 aa  217  5e-55  Shewanella sp. MR-4  Bacteria  normal  hitchhiker  0.00067966 
 
 
-
 
NC_013889  TK90_0949  methyl-accepting chemotaxis sensory transducer  40.3 
 
 
636 aa  216  5e-55  Thioalkalivibrio sp. K90mix  Bacteria  normal  normal  0.0451727 
 
 
-
 
NC_010501  PputW619_0425  methyl-accepting chemotaxis sensory transducer with Cache sensor  37.12 
 
 
630 aa  216  5.9999999999999996e-55  Pseudomonas putida W619  Bacteria  normal  0.461628  normal 
 
 
-
 
NC_007005  Psyr_3534  histidine kinase, HAMP region:Cache: chemotaxis sensory transducer  34.91 
 
 
629 aa  216  5.9999999999999996e-55  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.667463  normal  0.0882884 
 
 
-
 
NC_004347  SO_1056  methyl-accepting chemotaxis protein  39.15 
 
 
630 aa  216  7e-55  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_009092  Shew_0808  methyl-accepting chemotaxis sensory transducer  38.24 
 
 
554 aa  216  7e-55  Shewanella loihica PV-4  Bacteria  normal  normal 
 
 
-
 
NC_013422  Hneap_0470  methyl-accepting chemotaxis sensory transducer  36.75 
 
 
668 aa  216  7e-55  Halothiobacillus neapolitanus c2  Bacteria  normal  n/a   
 
 
-
 
NC_009783  VIBHAR_01753  hypothetical protein  38.81 
 
 
545 aa  216  9.999999999999999e-55  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_013456  VEA_001822  methyl-accepting chemotaxis protein  37.89 
 
 
557 aa  216  9.999999999999999e-55  Vibrio sp. Ex25  Bacteria  unclonable  0.00000124429  n/a   
 
 
-
 
NC_009831  Ssed_3705  methyl-accepting chemotaxis sensory transducer  35.26 
 
 
541 aa  215  9.999999999999999e-55  Shewanella sediminis HAW-EB3  Bacteria  normal  0.0963791  normal 
 
 
-
 
NC_008740  Maqu_0339  methyl-accepting chemotaxis sensory transducer  40.37 
 
 
558 aa  216  9.999999999999999e-55  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_009831  Ssed_3532  methyl-accepting chemotaxis sensory transducer  32.08 
 
 
555 aa  214  1.9999999999999998e-54  Shewanella sediminis HAW-EB3  Bacteria  normal  normal 
 
 
-
 
NC_013889  TK90_2562  methyl-accepting chemotaxis sensory transducer  37.06 
 
 
671 aa  215  1.9999999999999998e-54  Thioalkalivibrio sp. K90mix  Bacteria  normal  hitchhiker  0.0046581 
 
 
-
 
NC_009654  Mmwyl1_0130  methyl-accepting chemotaxis sensory transducer  37.41 
 
 
671 aa  214  1.9999999999999998e-54  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_009483  Gura_3311  methyl-accepting chemotaxis sensory transducer  38.08 
 
 
547 aa  214  1.9999999999999998e-54  Geobacter uraniireducens Rf4  Bacteria  normal  0.691655  n/a   
 
 
-
 
NC_008700  Sama_2880  putative methyl-accepting chemotaxis sensory transducer  35.88 
 
 
558 aa  215  1.9999999999999998e-54  Shewanella amazonensis SB2B  Bacteria  normal  normal 
 
 
-
 
NC_009052  Sbal_0870  methyl-accepting chemotaxis sensory transducer  37.47 
 
 
554 aa  214  2.9999999999999995e-54  Shewanella baltica OS155  Bacteria  normal  0.0571565  n/a   
 
 
-
 
Page 1 of 3    << first  < prev  1  2  3    next >  last >>