More than 300 homologs were found in PanDaTox collection
for query gene RPB_1313 on replicon NC_007778
Organism: Rhodopseudomonas palustris HaA2



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007778  RPB_1313  methyl-accepting chemotaxis sensory transducer  100 
 
 
434 aa  845    Rhodopseudomonas palustris HaA2  Bacteria  normal  normal  0.204182 
 
 
-
 
NC_011004  Rpal_4791  methyl-accepting chemotaxis sensory transducer  73.5 
 
 
434 aa  593  1e-168  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_007958  RPD_3907  chemotaxis sensory transducer  77.11 
 
 
424 aa  557  1e-157  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal  0.827608 
 
 
-
 
NC_007958  RPD_1394  chemotaxis sensory transducer  40.05 
 
 
444 aa  274  3e-72  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_007778  RPB_1414  methyl-accepting chemotaxis sensory transducer  40.7 
 
 
440 aa  254  2.0000000000000002e-66  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.0801097  normal 
 
 
-
 
NC_007925  RPC_4661  methyl-accepting chemotaxis sensory transducer  40.61 
 
 
440 aa  249  7e-65  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.224598 
 
 
-
 
NC_011004  Rpal_4783  methyl-accepting chemotaxis sensory transducer  51.66 
 
 
730 aa  246  6.999999999999999e-64  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_011004  Rpal_4682  methyl-accepting chemotaxis sensory transducer  40.14 
 
 
441 aa  245  9.999999999999999e-64  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_007925  RPC_4101  methyl-accepting chemotaxis sensory transducer  51.43 
 
 
698 aa  243  3.9999999999999997e-63  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal 
 
 
-
 
NC_009485  BBta_6635  methyl-accepting chemotaxis protein  47.7 
 
 
565 aa  239  8e-62  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.459746  normal  0.104137 
 
 
-
 
NC_009485  BBta_4269  putative methyl-accepting chemotaxis receptor/sensory transducer protein  48.57 
 
 
691 aa  237  4e-61  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.35374 
 
 
-
 
NC_007778  RPB_2250  methyl-accepting chemotaxis sensory transducer  40.59 
 
 
670 aa  235  1.0000000000000001e-60  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_007925  RPC_2149  methyl-accepting chemotaxis sensory transducer  48.75 
 
 
675 aa  234  2.0000000000000002e-60  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.0391093 
 
 
-
 
NC_009485  BBta_2368  putative methyl-accepting chemotaxis receptor/sensory transducer precursor  40.55 
 
 
561 aa  234  3e-60  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.280114 
 
 
-
 
NC_009485  BBta_0969  methyl-accepting chemotaxis sensory transducer  47.33 
 
 
562 aa  233  4.0000000000000004e-60  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.956339  normal  0.570918 
 
 
-
 
NC_007778  RPB_1321  methyl-accepting chemotaxis sensory transducer  50.18 
 
 
730 aa  233  5e-60  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.0177086  normal  0.260794 
 
 
-
 
NC_011004  Rpal_5119  methyl-accepting chemotaxis sensory transducer  49.25 
 
 
563 aa  233  5e-60  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_009485  BBta_2901  methyl-accepting chemotaxis sensory transducer  48.75 
 
 
674 aa  233  7.000000000000001e-60  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.14772  normal  0.22504 
 
 
-
 
NC_009485  BBta_6483  methyl-accepting chemotaxis protein  50.75 
 
 
565 aa  231  2e-59  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.877741  normal 
 
 
-
 
NC_007958  RPD_0840  chemotaxis sensory transducer  50 
 
 
712 aa  231  2e-59  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal  0.174635 
 
 
-
 
NC_011004  Rpal_4118  methyl-accepting chemotaxis sensory transducer  48.21 
 
 
567 aa  230  3e-59  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_007958  RPD_1857  chemotaxis sensory transducer  40.88 
 
 
563 aa  231  3e-59  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_007925  RPC_3161  methyl-accepting chemotaxis sensory transducer  48.21 
 
 
731 aa  230  4e-59  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.072786  normal 
 
 
-
 
NC_007925  RPC_4580  methyl-accepting chemotaxis sensory transducer  40.66 
 
 
563 aa  230  4e-59  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.174371  normal 
 
 
-
 
NC_007925  RPC_4407  methyl-accepting chemotaxis sensory transducer  49.28 
 
 
566 aa  229  7e-59  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.365939 
 
 
-
 
NC_007643  Rru_A3465  methyl-accepting chemotaxis sensory transducer  40.24 
 
 
419 aa  228  1e-58  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.61828  n/a   
 
 
-
 
NC_011004  Rpal_5120  methyl-accepting chemotaxis sensory transducer  39.59 
 
 
563 aa  229  1e-58  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_007778  RPB_4561  methyl-accepting chemotaxis sensory transducer  50 
 
 
711 aa  229  1e-58  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_007925  RPC_1795  methyl-accepting chemotaxis sensory transducer  48.71 
 
 
561 aa  228  1e-58  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.432423  normal  0.0230577 
 
 
-
 
NC_007925  RPC_3378  methyl-accepting chemotaxis sensory transducer  39.8 
 
 
563 aa  229  1e-58  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.104618  normal 
 
 
-
 
NC_011004  Rpal_2025  methyl-accepting chemotaxis sensory transducer  48.55 
 
 
688 aa  227  2e-58  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.0110809  n/a   
 
 
-
 
NC_007778  RPB_2358  methyl-accepting chemotaxis sensory transducer  49.08 
 
 
673 aa  228  2e-58  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal  0.207811 
 
 
-
 
NC_009485  BBta_7508  putative methyl-accepting chemotaxis protein (with a HAMP region)  48.58 
 
 
552 aa  228  2e-58  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.692825  normal 
 
 
-
 
NC_007925  RPC_3380  methyl-accepting chemotaxis sensory transducer  49.08 
 
 
567 aa  227  3e-58  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.689596 
 
 
-
 
NC_007925  RPC_4406  methyl-accepting chemotaxis sensory transducer  48.23 
 
 
566 aa  226  4e-58  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.341232 
 
 
-
 
NC_007958  RPD_0065  chemotaxis sensory transducer  48.19 
 
 
688 aa  226  6e-58  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal  0.0714339 
 
 
-
 
NC_011004  Rpal_2757  methyl-accepting chemotaxis sensory transducer  47.14 
 
 
561 aa  226  8e-58  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.0630329  n/a   
 
 
-
 
NC_009485  BBta_2907  putative methyl-accepting chemotaxis protein  51.12 
 
 
556 aa  226  8e-58  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.835875  normal  0.0729634 
 
 
-
 
NC_011004  Rpal_3598  methyl-accepting chemotaxis sensory transducer  47.14 
 
 
672 aa  226  9e-58  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_009485  BBta_0330  putative methyl-accepting chemotaxis receptor/sensory transducer  51.45 
 
 
676 aa  226  9e-58  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.0869057 
 
 
-
 
NC_007778  RPB_0192  methyl-accepting chemotaxis sensory transducer  47.67 
 
 
688 aa  225  1e-57  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_010172  Mext_3147  chemotaxis sensory transducer  52.4 
 
 
561 aa  225  1e-57  Methylobacterium extorquens PA1  Bacteria  normal  0.0908078  normal 
 
 
-
 
NC_011757  Mchl_3471  methyl-accepting chemotaxis sensory transducer  52.4 
 
 
561 aa  225  1e-57  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.130295  normal 
 
 
-
 
NC_011004  Rpal_4974  methyl-accepting chemotaxis sensory transducer  36.28 
 
 
440 aa  224  2e-57  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.178259  n/a   
 
 
-
 
NC_007778  RPB_2983  methyl-accepting chemotaxis sensory transducer  48.57 
 
 
561 aa  224  2e-57  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal  0.0323515 
 
 
-
 
NC_007925  RPC_1843  methyl-accepting chemotaxis sensory transducer  46.79 
 
 
568 aa  224  2e-57  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.618754 
 
 
-
 
NC_007958  RPD_0497  chemotaxis sensory transducer  48.4 
 
 
577 aa  225  2e-57  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_007958  RPD_0995  chemotaxis sensory transducer  45.91 
 
 
656 aa  224  2e-57  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.880627  normal 
 
 
-
 
NC_007958  RPD_1918  chemotaxis sensory transducer  48.55 
 
 
688 aa  224  2e-57  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal  0.537222 
 
 
-
 
NC_007958  RPD_2465  chemotaxis sensory transducer  48.57 
 
 
561 aa  225  2e-57  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.5909  normal  0.697276 
 
 
-
 
NC_009485  BBta_2908  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  50.18 
 
 
561 aa  224  3e-57  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.07018 
 
 
-
 
NC_010172  Mext_0667  chemotaxis sensory transducer  51.29 
 
 
565 aa  224  3e-57  Methylobacterium extorquens PA1  Bacteria  normal  0.510632  normal  0.195802 
 
 
-
 
NC_007925  RPC_2744  methyl-accepting chemotaxis sensory transducer  38.81 
 
 
572 aa  223  4e-57  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.696609  normal  0.585687 
 
 
-
 
NC_007958  RPD_3107  chemotaxis sensory transducer  47.97 
 
 
674 aa  223  4e-57  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal  0.0664997 
 
 
-
 
NC_011004  Rpal_0924  methyl-accepting chemotaxis sensory transducer  51.12 
 
 
712 aa  223  4.9999999999999996e-57  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.991242  n/a   
 
 
-
 
NC_011757  Mchl_0679  methyl-accepting chemotaxis sensory transducer  51.29 
 
 
565 aa  223  4.9999999999999996e-57  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal  0.0248904 
 
 
-
 
NC_011004  Rpal_4271  methyl-accepting chemotaxis sensory transducer  47.83 
 
 
567 aa  223  4.9999999999999996e-57  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_011004  Rpal_1830  methyl-accepting chemotaxis sensory transducer  39.76 
 
 
563 aa  223  4.9999999999999996e-57  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_007925  RPC_2742  methyl-accepting chemotaxis sensory transducer  48.04 
 
 
560 aa  223  4.9999999999999996e-57  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.429688 
 
 
-
 
NC_009485  BBta_2367  putative methyl-accepting chemotaxis receptor/sensory transducer precursor  50 
 
 
562 aa  223  6e-57  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.287749 
 
 
-
 
NC_007925  RPC_0061  methyl-accepting chemotaxis sensory transducer  52.03 
 
 
674 aa  223  6e-57  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal 
 
 
-
 
NC_009485  BBta_2906  putative methyl-accepting chemotaxis protein  51.29 
 
 
564 aa  223  6e-57  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.430156  normal  0.106702 
 
 
-
 
NC_010505  Mrad2831_2241  methyl-accepting chemotaxis sensory transducer  50.55 
 
 
566 aa  223  7e-57  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_007778  RPB_3545  methyl-accepting chemotaxis sensory transducer  47.83 
 
 
689 aa  223  7e-57  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.457552  normal  0.598514 
 
 
-
 
NC_009485  BBta_2904  putative methyl-accepting chemotaxis protein  39.2 
 
 
568 aa  223  7e-57  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.481458  normal  0.283558 
 
 
-
 
NC_007958  RPD_3547  chemotaxis sensory transducer  49.47 
 
 
566 aa  223  7e-57  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_007778  RPB_4280  methyl-accepting chemotaxis sensory transducer  48.19 
 
 
563 aa  222  9e-57  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_007925  RPC_4527  methyl-accepting chemotaxis sensory transducer  47.62 
 
 
667 aa  222  9e-57  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.527831 
 
 
-
 
NC_011004  Rpal_5172  methyl-accepting chemotaxis sensory transducer  47.76 
 
 
656 aa  221  9.999999999999999e-57  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_009485  BBta_2905  putative methyl-accepting chemotaxis protein  48.88 
 
 
542 aa  222  9.999999999999999e-57  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.234112  normal  0.211145 
 
 
-
 
NC_009485  BBta_6717  methyl-accepting chemotaxis sensory transducer  49.08 
 
 
741 aa  222  9.999999999999999e-57  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.447835  normal  0.587139 
 
 
-
 
NC_007958  RPD_0994  chemotaxis sensory transducer  45.2 
 
 
656 aa  222  9.999999999999999e-57  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.357708  normal 
 
 
-
 
NC_007925  RPC_3379  methyl-accepting chemotaxis sensory transducer  52.87 
 
 
587 aa  221  1.9999999999999999e-56  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.787169  normal 
 
 
-
 
NC_011004  Rpal_4941  methyl-accepting chemotaxis sensory transducer  49.82 
 
 
563 aa  221  1.9999999999999999e-56  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.396774  n/a   
 
 
-
 
NC_007643  Rru_A1293  methyl-accepting chemotaxis sensory transducer  48.75 
 
 
562 aa  221  3e-56  Rhodospirillum rubrum ATCC 11170  Bacteria  decreased coverage  0.00511002  n/a   
 
 
-
 
NC_007925  RPC_4147  methyl-accepting chemotaxis sensory transducer  48.89 
 
 
694 aa  220  3.9999999999999997e-56  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal 
 
 
-
 
NC_010505  Mrad2831_3824  methyl-accepting chemotaxis sensory transducer  48.34 
 
 
561 aa  219  6e-56  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_007925  RPC_3377  methyl-accepting chemotaxis sensory transducer  46.07 
 
 
563 aa  219  6e-56  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.528008  normal 
 
 
-
 
NC_011757  Mchl_4818  methyl-accepting chemotaxis sensory transducer  52.42 
 
 
252 aa  219  7e-56  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal 
 
 
-
 
NC_007964  Nham_1080  methyl-accepting chemotaxis sensory transducer  49.28 
 
 
698 aa  218  2e-55  Nitrobacter hamburgensis X14  Bacteria  normal  0.0139762  n/a   
 
 
-
 
NC_007778  RPB_2653  methyl-accepting chemotaxis sensory transducer  47.65 
 
 
691 aa  218  2e-55  Rhodopseudomonas palustris HaA2  Bacteria  decreased coverage  0.00184965  normal  0.0777916 
 
 
-
 
NC_007925  RPC_2846  methyl-accepting chemotaxis sensory transducer  48.71 
 
 
565 aa  218  2e-55  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.430745  normal 
 
 
-
 
NC_009485  BBta_2900  putative methyl-accepting chemotaxis receptor/sensory transducer (chemoreceptor)  48.19 
 
 
675 aa  218  2e-55  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.142675  normal  0.173139 
 
 
-
 
NC_009485  BBta_5110  hypothetical protein  41.88 
 
 
688 aa  217  2.9999999999999998e-55  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.791751 
 
 
-
 
NC_009485  BBta_0644  putative methyl-accepting chemotaxis receptor/sensory transducer  47.64 
 
 
565 aa  216  5.9999999999999996e-55  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_007778  RPB_4286  methyl-accepting chemotaxis sensory transducer  38.83 
 
 
563 aa  216  5.9999999999999996e-55  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_007643  Rru_A1197  chemotaxis sensory transducer  47.33 
 
 
688 aa  216  9e-55  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_007958  RPD_0337  chemotaxis sensory transducer  49.63 
 
 
563 aa  216  9e-55  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.760858  normal  0.789667 
 
 
-
 
NC_009485  BBta_2799  putative receptor/sensory transducer  49.25 
 
 
707 aa  215  9.999999999999999e-55  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.0655652  normal 
 
 
-
 
NC_010725  Mpop_3344  methyl-accepting chemotaxis sensory transducer  50.55 
 
 
561 aa  215  9.999999999999999e-55  Methylobacterium populi BJ001  Bacteria  normal  0.828703  normal 
 
 
-
 
NC_007925  RPC_4809  methyl-accepting chemotaxis sensory transducer  40.35 
 
 
563 aa  215  9.999999999999999e-55  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal 
 
 
-
 
NC_011004  Rpal_1871  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  46.49 
 
 
716 aa  214  1.9999999999999998e-54  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_009485  BBta_1536  methyl-accepting chemotaxis protein  50.18 
 
 
716 aa  214  1.9999999999999998e-54  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.566253  normal  0.284447 
 
 
-
 
NC_007778  RPB_3610  methyl-accepting chemotaxis sensory transducer  53.71 
 
 
563 aa  214  1.9999999999999998e-54  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.735593  normal  0.400148 
 
 
-
 
NC_007958  RPD_0153  chemotaxis sensory transducer  54.59 
 
 
602 aa  214  1.9999999999999998e-54  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_007958  RPD_1867  chemotaxis sensory transducer  39 
 
 
714 aa  214  1.9999999999999998e-54  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal  0.133032 
 
 
-
 
NC_007643  Rru_A2484  chemotaxis sensory transducer  49.43 
 
 
563 aa  214  2.9999999999999995e-54  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.1562  n/a   
 
 
-
 
NC_009485  BBta_2903  methyl-accepting chemotaxis sensory transducer  47.69 
 
 
568 aa  214  2.9999999999999995e-54  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.335645  normal  0.0996392 
 
 
-
 
NC_007778  RPB_1317  methyl-accepting chemotaxis sensory transducer  38.67 
 
 
560 aa  214  2.9999999999999995e-54  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal  0.14669 
 
 
-
 
NC_009485  BBta_2902  methyl-accepting chemotaxis sensory transducer  48.57 
 
 
563 aa  214  2.9999999999999995e-54  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.32606  normal  0.0943242 
 
 
-
 
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