| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_3907 |
|---|
| Symbol | |
|---|
| ID | 4024423 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris BisB5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007958 |
|---|
| Strand | - |
|---|
| Start bp | 4347306 |
|---|
| End bp | 4348580 |
|---|
| Gene Length | 1275 bp |
|---|
| Protein Length | 424 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 637964111 |
|---|
| Product | chemotaxis sensory transducer |
|---|
| Protein accession | YP_571029 |
|---|
| Protein GI | 91978370 |
|---|
| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.827608 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCGCGC TCGGCGCGGT GGCCATCGTG GTTGTGGGGC TGGGGCTGCT GCGGCTCGGC
GTCGGCCCGT TGGGCGGCCT GTGGGATGCG GCGGGCCTGG CGCTCAGTGC TGCTCTGCTC
GGGCTCGCCG GCTGGTGGCT GCGCAGCACG GCGGTCGCGG CGCAGGAGAT CGCCTCGGTC
TGCGACAGCG CCCGGCGCGG CGACCTCGAG GCGCGTGTGC AGGGCCGCCG CGACGGCGGC
GACATCGGCA AGGCGCAGGC CGAGGTCAAC AACATGCTCG ACATTGTCGA CGCCTTCGTC
CGCGAAGCGT CAGCGTCGAT GGACTATGTC AGTCAAGGCA AGACCTTCCG CAAGGTGCTG
AGCCGCGGGC TGCCCGGCTC GTTCCGGACC GCGGCTGTCA CTATCAACGG CGCCACCGAC
GTGATGGATC GCAAGGTTCG CGAAGTGGCA TTGGAGGCGC AGTGCTTCGC GGCCGGGATG
GACGATGTCG CCGGAATGCT GGCGACGGCC GCGACGGGCT TGAAGTCCGA CGCCGGCGCG
ATGGCCGAGG CGGCGGAGGA AACCAGCCGG CAGTCGACCA GCGTCGCCTC CGGTTCGGAA
CAGGCGTCGG TGAATGTGCA GACGGTCGCG AGCGCTGCCG AGGAGTTGAC GGCCTCGATC
GTGGAAATCT CCCGCCAGAT CCAGCTCTCG ACCTCCAGCA CCCACCAGGC CGTTGAGGAG
GCCGAGCAGA CCAACGCCAA GATCCGCAAT CTCGCCGAGG CCGCGCAGCG GATCGGTGAT
GTGGTGAAGC TGATCAACGC CGTTGCGGCG CAGACCAATC TGCTGGCGCT GAACGCCACG
ATCGAGGCCG CACGCGCCGG CGAGTCCGGC AAGGGATTCG CGGTGGTCGC GTCGGAGGTG
AAGACGTTGG CCAGTCAGAC CGCGAAGGCG ACCGAGGAGA TCACGGCGCG CATTGCCGAG
ATGCAGTTGA TCACCGGTCA GTCGGTCGAG GCGGTTGAAG CGATCAGCCG CCGGATCAGC
CAGATCAACG AAGTCTCGAG TACGATCGCC GCCGCCGTCG AGCAGCAGGG CGCGGCGACT
CGCGAGATCG CCATGAACGT TCAGCAGGCC TCCGCCGGCA CCGCCGAAGT CTCCGCCAAC
ATCGTCGGTA TCAGCCATGC CGCCGACGAC ACCGGCAAGA TCGCATCGCG CGTCAACACG
GCTTCCGGCA AGATCGCCAG CGAAGTCGAT ACGCTGCGCA GCGAAGTTCA GCGCTTCCTG
GCCAAGGTGG CGTAA
|
|---|
| Protein sequence | MAALGAVAIV VVGLGLLRLG VGPLGGLWDA AGLALSAALL GLAGWWLRST AVAAQEIASV
CDSARRGDLE ARVQGRRDGG DIGKAQAEVN NMLDIVDAFV REASASMDYV SQGKTFRKVL
SRGLPGSFRT AAVTINGATD VMDRKVREVA LEAQCFAAGM DDVAGMLATA ATGLKSDAGA
MAEAAEETSR QSTSVASGSE QASVNVQTVA SAAEELTASI VEISRQIQLS TSSTHQAVEE
AEQTNAKIRN LAEAAQRIGD VVKLINAVAA QTNLLALNAT IEAARAGESG KGFAVVASEV
KTLASQTAKA TEEITARIAE MQLITGQSVE AVEAISRRIS QINEVSSTIA AAVEQQGAAT
REIAMNVQQA SAGTAEVSAN IVGISHAADD TGKIASRVNT ASGKIASEVD TLRSEVQRFL
AKVA
|
|---|
| |